RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 SCUBE2Q9NQ36 999 aa18.63■□□□□ 0.57
HDAC6-205ENST00000423941 EIF2B4Q9UI10 523 aaKnown RBP18.63■□□□□ 0.57
HDAC6-205ENST00000423941 PPIL1Q9Y3C6 166 aa18.63■□□□□ 0.57
HDAC6-205ENST00000423941 PCDHGC4Q9Y5F7 938 aa18.63■□□□□ 0.57
HDAC6-205ENST00000423941 SLCO1B1Q9Y6L6 691 aa18.63■□□□□ 0.57
HDAC6-205ENST00000423941 CACNA1EQ15878 2313 aa18.62■□□□□ 0.57
HDAC6-205ENST00000423941 FAM47DPA6NHR8 397 aa18.62■□□□□ 0.57
HDAC6-205ENST00000423941 MEI4A8MW99 385 aa18.62■□□□□ 0.57
HDAC6-205ENST00000423941 FOXD2O60548 495 aaPredicted RBP18.62■□□□□ 0.57
HDAC6-205ENST00000423941 FSBPO95073 299 aa18.62■□□□□ 0.57
HDAC6-205ENST00000423941 PTPN3P26045 913 aa18.62■□□□□ 0.57
HDAC6-205ENST00000423941 DSC2Q02487 901 aa18.62■□□□□ 0.57
HDAC6-205ENST00000423941 TMEM52BQ4KMG9 183 aa18.62■□□□□ 0.57
HDAC6-205ENST00000423941 B4GALNT4Q76KP1 1039 aa18.62■□□□□ 0.57
HDAC6-205ENST00000423941 RABEPKQ7Z6M1 372 aa18.62■□□□□ 0.57
HDAC6-205ENST00000423941 ZC3H18Q86VM9 953 aaKnown RBP18.62■□□□□ 0.57
HDAC6-205ENST00000423941 HORMAD1Q86X24 394 aa18.62■□□□□ 0.57
HDAC6-205ENST00000423941 TTC13Q8NBP0 860 aa18.62■□□□□ 0.57
HDAC6-205ENST00000423941 ASB12Q8WXK4 309 aa18.62■□□□□ 0.57
HDAC6-205ENST00000423941 FEM1CQ96JP0 617 aa18.62■□□□□ 0.57
HDAC6-205ENST00000423941 TEKT5Q96M29 485 aa18.62■□□□□ 0.57
HDAC6-205ENST00000423941 HAUS2Q9NVX0 235 aa18.62■□□□□ 0.57
HDAC6-205ENST00000423941 SUSD2Q9UGT4 822 aa18.62■□□□□ 0.57
HDAC6-205ENST00000423941 DMTF1Q9Y222 760 aa18.62■□□□□ 0.57
HDAC6-205ENST00000423941 A0A1B0GTW7 788 aa18.61■□□□□ 0.57
HDAC6-205ENST00000423941 TCRBV7S2A1N4TA0A589 114 aa18.61■□□□□ 0.57
HDAC6-205ENST00000423941 UPK3BL1B0FP48 263 aa18.61■□□□□ 0.57
HDAC6-205ENST00000423941 PATE3B3GLJ2 98 aa18.61■□□□□ 0.57
HDAC6-205ENST00000423941 UPK3BL2E5RIL1 263 aa18.61■□□□□ 0.57
HDAC6-205ENST00000423941 RIOK3O14730 519 aaKnown RBP18.61■□□□□ 0.57
HDAC6-205ENST00000423941 RNGTTO60942 597 aaKnown RBP18.61■□□□□ 0.57
HDAC6-205ENST00000423941 SERPINF2P08697 491 aa18.61■□□□□ 0.57
HDAC6-205ENST00000423941 POLR2LP62875 67 aaKnown RBP18.61■□□□□ 0.57
HDAC6-205ENST00000423941 IRX4P78413 519 aa18.61■□□□□ 0.57
HDAC6-205ENST00000423941 TRAF2Q12933 501 aa18.61■□□□□ 0.57
HDAC6-205ENST00000423941 SLC14A2Q15849 920 aa18.61■□□□□ 0.57
HDAC6-205ENST00000423941 CCDC6Q16204 474 aa18.61■□□□□ 0.57
HDAC6-205ENST00000423941 KIAA1161Q6NSJ0 714 aa18.61■□□□□ 0.57
HDAC6-205ENST00000423941 RGL4Q8IZJ4 473 aa18.61■□□□□ 0.57
HDAC6-205ENST00000423941 HAUS1Q96CS2 278 aa18.61■□□□□ 0.57
HDAC6-205ENST00000423941 IMP4Q96G21 291 aaKnown RBP18.61■□□□□ 0.57
HDAC6-205ENST00000423941 VAT1Q99536 393 aa18.61■□□□□ 0.57
HDAC6-205ENST00000423941 C1QTNF2Q9BXJ5 285 aa18.61■□□□□ 0.57
HDAC6-205ENST00000423941 USP29Q9HBJ7 922 aa18.61■□□□□ 0.57
HDAC6-205ENST00000423941 KCND1Q9NSA2 647 aa18.61■□□□□ 0.57
HDAC6-205ENST00000423941 PYCARDQ9ULZ3 195 aa18.61■□□□□ 0.57
HDAC6-205ENST00000423941 GVINP1Q7Z2Y8 2422 aa18.61■□□□□ 0.57
HDAC6-205ENST00000423941 ATXN2Q99700 1313 aaKnown RBP18.6■□□□□ 0.57
HDAC6-205ENST00000423941 CFAP54Q96N23 3096 aa18.6■□□□□ 0.57
HDAC6-205ENST00000423941 A0A1W2PQU0 124 aa18.6■□□□□ 0.57
HDAC6-205ENST00000423941 CFAP69A5D8W1 941 aa18.6■□□□□ 0.57
HDAC6-205ENST00000423941 BCAT2O15382 392 aaPredicted RBP18.6■□□□□ 0.57
HDAC6-205ENST00000423941 PRLP01236 227 aa18.6■□□□□ 0.57
HDAC6-205ENST00000423941 RBP3P10745 1247 aa18.6■□□□□ 0.57
HDAC6-205ENST00000423941 GNSP15586 552 aa18.6■□□□□ 0.57
HDAC6-205ENST00000423941 ITIH2P19823 946 aa18.6■□□□□ 0.57
HDAC6-205ENST00000423941 CD68P34810 354 aaPredicted RBP18.6■□□□□ 0.57
HDAC6-205ENST00000423941 RPS21P63220 83 aaKnown RBP18.6■□□□□ 0.57
HDAC6-205ENST00000423941 FGL2Q14314 439 aa18.6■□□□□ 0.57
HDAC6-205ENST00000423941 PRR23CQ6ZRP0 262 aa18.6■□□□□ 0.57
HDAC6-205ENST00000423941 PRPF39Q86UA1 669 aaKnown RBP18.6■□□□□ 0.57
HDAC6-205ENST00000423941 SLC13A5Q86YT5 568 aaPredicted RBP18.6■□□□□ 0.57
HDAC6-205ENST00000423941 CBARPQ8N350 705 aaPredicted RBP18.6■□□□□ 0.57
HDAC6-205ENST00000423941 SLC35B2Q8TB61 432 aa18.6■□□□□ 0.57
HDAC6-205ENST00000423941 PIH1D2Q8WWB5 315 aa18.6■□□□□ 0.57
HDAC6-205ENST00000423941 HTR3CQ8WXA8 447 aa18.6■□□□□ 0.57
HDAC6-205ENST00000423941 SLC25A51Q9H1U9 297 aa18.6■□□□□ 0.57
HDAC6-205ENST00000423941 SMOC1Q9H4F8 434 aa18.6■□□□□ 0.57
HDAC6-205ENST00000423941 TM9SF3Q9HD45 589 aa18.6■□□□□ 0.57
HDAC6-205ENST00000423941 PCDH12Q9NPG4 1184 aa18.6■□□□□ 0.57
HDAC6-205ENST00000423941 TRMT1Q9NXH9 659 aaKnown RBP18.6■□□□□ 0.57
HDAC6-205ENST00000423941 GGT7Q9UJ14 662 aa18.6■□□□□ 0.57
HDAC6-205ENST00000423941 SLC6A14Q9UN76 642 aa18.6■□□□□ 0.57
HDAC6-205ENST00000423941 JRKLQ9Y4A0 524 aa18.6■□□□□ 0.57
HDAC6-205ENST00000423941 ADAMTS9Q9P2N4 1935 aa18.6■□□□□ 0.57
HDAC6-205ENST00000423941 DMXL1Q9Y485 3027 aa18.6■□□□□ 0.57
HDAC6-205ENST00000423941 PTPRZ1P23471 2315 aaPredicted RBP18.59■□□□□ 0.57
HDAC6-205ENST00000423941 A0A1W2PR77 199 aa18.59■□□□□ 0.57
HDAC6-205ENST00000423941 USP27XA6NNY8 438 aa18.59■□□□□ 0.57
HDAC6-205ENST00000423941 PRR5-ARHGAP8B1AHC4 643 aa18.59■□□□□ 0.57
HDAC6-205ENST00000423941 PCDH8O95206 1070 aa18.59■□□□□ 0.57
HDAC6-205ENST00000423941 PGLSO95336 258 aa18.59■□□□□ 0.57
HDAC6-205ENST00000423941 PDHA1P08559 390 aa18.59■□□□□ 0.57
HDAC6-205ENST00000423941 RBL1P28749 1068 aa18.59■□□□□ 0.57
HDAC6-205ENST00000423941 MMP12P39900 470 aa18.59■□□□□ 0.57
HDAC6-205ENST00000423941 EIF3EP60228 445 aaKnown RBP18.59■□□□□ 0.57
HDAC6-205ENST00000423941 RACK1P63244 317 aaKnown RBP18.59■□□□□ 0.57
HDAC6-205ENST00000423941 SKOR1P84550 965 aa18.59■□□□□ 0.57
HDAC6-205ENST00000423941 ELP6Q0PNE2 266 aa18.59■□□□□ 0.57
HDAC6-205ENST00000423941 AGERQ15109 404 aa18.59■□□□□ 0.57
HDAC6-205ENST00000423941 SF3A2Q15428 464 aaKnown RBP18.59■□□□□ 0.57
HDAC6-205ENST00000423941 SEL1L3Q68CR1 1132 aa18.59■□□□□ 0.57
HDAC6-205ENST00000423941 ZNF567Q8N184 647 aa18.59■□□□□ 0.57
HDAC6-205ENST00000423941 TMEM145Q8NBT3 493 aa18.59■□□□□ 0.57
HDAC6-205ENST00000423941 AGAP3Q96P47 875 aa18.59■□□□□ 0.57
HDAC6-205ENST00000423941 LENG8Q96PV6 779 aaPredicted RBP18.59■□□□□ 0.57
HDAC6-205ENST00000423941 CEP41Q9BYV8 373 aa18.59■□□□□ 0.57
HDAC6-205ENST00000423941 GLOD4Q9HC38 313 aa18.59■□□□□ 0.57
HDAC6-205ENST00000423941 PHTF1Q9UMS5 762 aa18.59■□□□□ 0.57
HDAC6-205ENST00000423941 ITM2BQ9Y287 266 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms