RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 PCDHGA7Q9Y5G6 932 aa17.05■□□□□ 0.32
UPF3AP3-201ENST00000420996 LRP4O75096 1905 aa17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 PES1O00541 588 aaKnown RBP17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 RASGRP1O95267 797 aa17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 CYP1A1P04798 512 aaPredicted RBP17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 CELA2BP08218 269 aaPredicted RBP17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 CTSEP14091 401 aa17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 RHOAP61586 193 aa17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 UBE2HP62256 183 aa17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 LRRC14Q15048 493 aa17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 IRF4Q15306 451 aa17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 RAB11FIP2Q7L804 512 aa17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 ZNF354CQ86Y25 554 aa17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 HID1Q8IV36 788 aa17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 FBXO39Q8N4B4 442 aa17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 CCDC185Q8N715 623 aa17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 KYQ8NBH2 561 aa17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 PCDH19Q8TAB3 1148 aa17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 JOSD2Q8TAC2 188 aa17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 HCAR2Q8TDS4 363 aa17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 SLC20A1Q8WUM9 679 aa17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 NTAN1Q96AB6 310 aa17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 CCDC74AQ96AQ1 378 aa17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 GFM1Q96RP9 751 aaKnown RBP17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 WRAP53Q9BUR4 548 aaKnown RBP17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 CPEB1Q9BZB8 566 aaKnown RBP17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 EDEM3Q9BZQ6 932 aa17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 NOL6Q9H6R4 1146 aaKnown RBP17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 RABGEF1Q9UJ41 708 aa17.04■□□□□ 0.32
UPF3AP3-201ENST00000420996 SCN8AQ9UQD0 1980 aa17.03■□□□□ 0.32
UPF3AP3-201ENST00000420996 D6RAR5 112 aa17.03■□□□□ 0.32
UPF3AP3-201ENST00000420996 EFSO43281 561 aa17.03■□□□□ 0.32
UPF3AP3-201ENST00000420996 XPAP23025 273 aaPredicted RBP17.03■□□□□ 0.32
UPF3AP3-201ENST00000420996 ERCC5P28715 1186 aaPredicted RBP17.03■□□□□ 0.32
UPF3AP3-201ENST00000420996 SLC5A2P31639 672 aa17.03■□□□□ 0.32
UPF3AP3-201ENST00000420996 HDAC4P56524 1084 aa17.03■□□□□ 0.32
UPF3AP3-201ENST00000420996 YBEYP58557 167 aaPredicted RBP17.03■□□□□ 0.32
UPF3AP3-201ENST00000420996 CDR2Q01850 454 aa17.03■□□□□ 0.32
UPF3AP3-201ENST00000420996 ELP6Q0PNE2 266 aa17.03■□□□□ 0.32
UPF3AP3-201ENST00000420996 ALG11Q2TAA5 492 aa17.03■□□□□ 0.32
UPF3AP3-201ENST00000420996 WSCD2Q2TBF2 565 aa17.03■□□□□ 0.32
UPF3AP3-201ENST00000420996 HSP90AA4PQ58FG1 418 aa17.03■□□□□ 0.32
UPF3AP3-201ENST00000420996 B3GNT8Q7Z7M8 397 aa17.03■□□□□ 0.32
UPF3AP3-201ENST00000420996 PHLDB2Q86SQ0 1253 aa17.03■□□□□ 0.32
UPF3AP3-201ENST00000420996 GKN2Q86XP6 184 aa17.03■□□□□ 0.32
UPF3AP3-201ENST00000420996 RTL3Q8N8U3 475 aaKnown RBP17.03■□□□□ 0.32
UPF3AP3-201ENST00000420996 OR6C4Q8NGE1 309 aa17.03■□□□□ 0.32
UPF3AP3-201ENST00000420996 FAM172AQ8WUF8 416 aa17.03■□□□□ 0.32
UPF3AP3-201ENST00000420996 TSACCQ96A04 125 aaPredicted RBP17.03■□□□□ 0.32
UPF3AP3-201ENST00000420996 STRADBQ9C0K7 418 aa17.03■□□□□ 0.32
UPF3AP3-201ENST00000420996 CLMPQ9H6B4 373 aa17.03■□□□□ 0.32
UPF3AP3-201ENST00000420996 EPB41L5Q9HCM4 733 aa17.03■□□□□ 0.32
UPF3AP3-201ENST00000420996 SIRPGQ9P1W8 387 aa17.03■□□□□ 0.32
UPF3AP3-201ENST00000420996 GPR34Q9UPC5 381 aa17.03■□□□□ 0.32
UPF3AP3-201ENST00000420996 CHRNB2P17787 502 aa17.02■□□□□ 0.32
UPF3AP3-201ENST00000420996 HTR1BP28222 390 aa17.02■□□□□ 0.32
UPF3AP3-201ENST00000420996 UGT1A5P35504 534 aa17.02■□□□□ 0.32
UPF3AP3-201ENST00000420996 INHBCP55103 352 aa17.02■□□□□ 0.32
UPF3AP3-201ENST00000420996 SRP54P61011 504 aaKnown RBP17.02■□□□□ 0.32
UPF3AP3-201ENST00000420996 CCL7P80098 99 aa17.02■□□□□ 0.32
UPF3AP3-201ENST00000420996 FMO1Q01740 532 aa17.02■□□□□ 0.32
UPF3AP3-201ENST00000420996 INPP5AQ14642 412 aa17.02■□□□□ 0.32
UPF3AP3-201ENST00000420996 NFATC4Q14934 902 aa17.02■□□□□ 0.32
UPF3AP3-201ENST00000420996 ENPP7Q6UWV6 458 aa17.02■□□□□ 0.32
UPF3AP3-201ENST00000420996 SLFN11Q7Z7L1 901 aa17.02■□□□□ 0.32
UPF3AP3-201ENST00000420996 NETO2Q8NC67 525 aa17.02■□□□□ 0.32
UPF3AP3-201ENST00000420996 ATL2Q8NHH9 583 aa17.02■□□□□ 0.32
UPF3AP3-201ENST00000420996 SLC30A5Q8TAD4 765 aa17.02■□□□□ 0.32
UPF3AP3-201ENST00000420996 TMEM74Q96NL1 305 aa17.02■□□□□ 0.32
UPF3AP3-201ENST00000420996 C11orf70Q9BRQ4 267 aa17.02■□□□□ 0.32
UPF3AP3-201ENST00000420996 APOOQ9BUR5 198 aa17.02■□□□□ 0.32
UPF3AP3-201ENST00000420996 KLC2Q9H0B6 622 aa17.02■□□□□ 0.32
UPF3AP3-201ENST00000420996 ACSL6Q9UKU0 697 aa17.02■□□□□ 0.32
UPF3AP3-201ENST00000420996 COQ6Q9Y2Z9 468 aa17.02■□□□□ 0.32
UPF3AP3-201ENST00000420996 UNC13CQ8NB66 2214 aa17.01■□□□□ 0.31
UPF3AP3-201ENST00000420996 A0A1W2PQM1 296 aa17.01■□□□□ 0.31
UPF3AP3-201ENST00000420996 INSIG1O15503 277 aa17.01■□□□□ 0.31
UPF3AP3-201ENST00000420996 SLC28A2O43868 658 aa17.01■□□□□ 0.31
UPF3AP3-201ENST00000420996 NOBOXO60393 691 aa17.01■□□□□ 0.31
UPF3AP3-201ENST00000420996 GFPT2O94808 682 aa17.01■□□□□ 0.31
UPF3AP3-201ENST00000420996 GJB6O95452 261 aa17.01■□□□□ 0.31
UPF3AP3-201ENST00000420996 RPLP0P05388 317 aaKnown RBP17.01■□□□□ 0.31
UPF3AP3-201ENST00000420996 KRT3P12035 628 aa17.01■□□□□ 0.31
UPF3AP3-201ENST00000420996 EPHB2P29323 1055 aa17.01■□□□□ 0.31
UPF3AP3-201ENST00000420996 CCKBRP32239 447 aa17.01■□□□□ 0.31
UPF3AP3-201ENST00000420996 RFC1P35251 1148 aaPredicted RBP17.01■□□□□ 0.31
UPF3AP3-201ENST00000420996 KCNC4Q03721 635 aa17.01■□□□□ 0.31
UPF3AP3-201ENST00000420996 SERINC3Q13530 473 aa17.01■□□□□ 0.31
UPF3AP3-201ENST00000420996 GRM3Q14832 879 aa17.01■□□□□ 0.31
UPF3AP3-201ENST00000420996 AGERQ15109 404 aa17.01■□□□□ 0.31
UPF3AP3-201ENST00000420996 UGP2Q16851 508 aa17.01■□□□□ 0.31
UPF3AP3-201ENST00000420996 DPCR1Q3MIW9 517 aa17.01■□□□□ 0.31
UPF3AP3-201ENST00000420996 XKR5Q6UX68 686 aa17.01■□□□□ 0.31
UPF3AP3-201ENST00000420996 TRIM72Q6ZMU5 477 aa17.01■□□□□ 0.31
UPF3AP3-201ENST00000420996 RD3Q7Z3Z2 195 aa17.01■□□□□ 0.31
UPF3AP3-201ENST00000420996 JAMLQ86YT9 394 aa17.01■□□□□ 0.31
UPF3AP3-201ENST00000420996 HMCESQ96FZ2 354 aa17.01■□□□□ 0.31
UPF3AP3-201ENST00000420996 FOXP3Q9BZS1 431 aa17.01■□□□□ 0.31
UPF3AP3-201ENST00000420996 LRRN3Q9H3W5 708 aa17.01■□□□□ 0.31
UPF3AP3-201ENST00000420996 LHX3Q9UBR4 397 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms