RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 SERPINB8P50452 374 aa7.46□□□□□ -1.21
BDNF-209ENST00000420794 EPHA5P54756 1037 aa7.46□□□□□ -1.21
BDNF-209ENST00000420794 IRX4P78413 519 aa7.46□□□□□ -1.21
BDNF-209ENST00000420794 GRSF1Q12849 480 aaKnown RBP eCLIP7.46□□□□□ -1.21
BDNF-209ENST00000420794 FASTKD3Q14CZ7 662 aaKnown RBP7.46□□□□□ -1.21
BDNF-209ENST00000420794 FAM78AQ5JUQ0 283 aa7.46□□□□□ -1.21
BDNF-209ENST00000420794 STYXQ8WUJ0 223 aa7.46□□□□□ -1.21
BDNF-209ENST00000420794 IMP4Q96G21 291 aaKnown RBP7.46□□□□□ -1.21
BDNF-209ENST00000420794 CLPBQ9H078 707 aa7.46□□□□□ -1.21
BDNF-209ENST00000420794 NOD2Q9HC29 1040 aa7.46□□□□□ -1.21
BDNF-209ENST00000420794 CHRAC1Q9NRG0 131 aa7.46□□□□□ -1.21
BDNF-209ENST00000420794 PCMTD2Q9NV79 361 aa7.46□□□□□ -1.21
BDNF-209ENST00000420794 TCAF1Q9Y4C2 921 aa7.46□□□□□ -1.21
BDNF-209ENST00000420794 SRP72O76094 671 aaKnown RBP7.46□□□□□ -1.22
BDNF-209ENST00000420794 FOSL2P15408 326 aa7.46□□□□□ -1.22
BDNF-209ENST00000420794 STMN1P16949 149 aa7.46□□□□□ -1.22
BDNF-209ENST00000420794 CHRM3P20309 590 aa7.46□□□□□ -1.22
BDNF-209ENST00000420794 NSUN2Q08J23 767 aaKnown RBP eCLIP7.46□□□□□ -1.22
BDNF-209ENST00000420794 SLC1A5Q15758 541 aa7.46□□□□□ -1.22
BDNF-209ENST00000420794 AFTPHQ6ULP2 937 aa7.46□□□□□ -1.22
BDNF-209ENST00000420794 RELL1Q8IUW5 271 aa7.46□□□□□ -1.22
BDNF-209ENST00000420794 MAML1Q92585 1016 aa7.46□□□□□ -1.22
BDNF-209ENST00000420794 VWCEQ96DN2 955 aa7.46□□□□□ -1.22
BDNF-209ENST00000420794 ZFYVE1Q9HBF4 777 aa7.46□□□□□ -1.22
BDNF-209ENST00000420794 ELOVL2Q9NXB9 296 aa7.46□□□□□ -1.22
BDNF-209ENST00000420794 PRRC2BQ5JSZ5 2229 aaKnown RBP7.46□□□□□ -1.22
BDNF-209ENST00000420794 TMEM120BA0PK00 339 aa7.46□□□□□ -1.22
BDNF-209ENST00000420794 RHOBTB1O94844 696 aa7.46□□□□□ -1.22
BDNF-209ENST00000420794 PRAMEF12O95522 483 aa7.46□□□□□ -1.22
BDNF-209ENST00000420794 ZNF7P17097 686 aaPredicted RBP7.46□□□□□ -1.22
BDNF-209ENST00000420794 CTPS1P17812 591 aa7.46□□□□□ -1.22
BDNF-209ENST00000420794 RGS4P49798 205 aa7.46□□□□□ -1.22
BDNF-209ENST00000420794 CSE1LP55060 971 aaKnown RBP7.46□□□□□ -1.22
BDNF-209ENST00000420794 TTC31Q49AM3 519 aaPredicted RBP7.46□□□□□ -1.22
BDNF-209ENST00000420794 RNF187Q5TA31 235 aaPredicted RBP7.46□□□□□ -1.22
BDNF-209ENST00000420794 TTC19Q6DKK2 380 aaPredicted RBP7.46□□□□□ -1.22
BDNF-209ENST00000420794 C22orf39Q6P5X5 142 aa7.46□□□□□ -1.22
BDNF-209ENST00000420794 STK40Q8N2I9 435 aa7.46□□□□□ -1.22
BDNF-209ENST00000420794 CCT6BQ92526 530 aa7.46□□□□□ -1.22
BDNF-209ENST00000420794 HDAC10Q969S8 669 aa7.46□□□□□ -1.22
BDNF-209ENST00000420794 ZFYVE19Q96K21 471 aa7.46□□□□□ -1.22
BDNF-209ENST00000420794 KLF6Q99612 283 aaPredicted RBP7.46□□□□□ -1.22
BDNF-209ENST00000420794 PRMT1Q99873 361 aaKnown RBP7.46□□□□□ -1.22
BDNF-209ENST00000420794 CASS4Q9NQ75 786 aa7.46□□□□□ -1.22
BDNF-209ENST00000420794 CATSPERZQ9NTU4 200 aa7.46□□□□□ -1.22
BDNF-209ENST00000420794 PHTF1Q9UMS5 762 aa7.46□□□□□ -1.22
BDNF-209ENST00000420794 CCL26Q9Y258 94 aa7.46□□□□□ -1.22
BDNF-209ENST00000420794 WDR91A4D1P6 747 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 H3BQ06 376 aaPredicted RBP7.45□□□□□ -1.22
BDNF-209ENST00000420794 GOLGA8TH3BQL2 631 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 EBAG9O00559 213 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 BUD23O43709 281 aaKnown RBP7.45□□□□□ -1.22
BDNF-209ENST00000420794 VPS26AO75436 327 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 PCDH8O95206 1070 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 ZWINTO95229 277 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 ASMTLO95671 621 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 OLFM2O95897 454 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 CD70P32970 193 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 GRIA1P42261 906 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 IRAK1P51617 712 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 RPL26P61254 145 aaKnown RBP7.45□□□□□ -1.22
BDNF-209ENST00000420794 MYLK3Q32MK0 819 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 TTLL9Q3SXZ7 439 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 ZDHHC20Q5W0Z9 365 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 TRIM68Q6AZZ1 485 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 CNTD1Q8N815 330 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 PRICKLE1Q96MT3 831 aaPredicted RBP7.45□□□□□ -1.22
BDNF-209ENST00000420794 TMEM109Q9BVC6 243 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 OSBPL1AQ9BXW6 950 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 CEP44Q9C0F1 390 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 SUV39H2Q9H5I1 410 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 ECT2Q9H8V3 914 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 DCDC2Q9UHG0 476 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 RPL26L1Q9UNX3 145 aaKnown RBP7.45□□□□□ -1.22
BDNF-209ENST00000420794 MRPS17Q9Y2R5 130 aaKnown RBP7.45□□□□□ -1.22
BDNF-209ENST00000420794 DNAJC6O75061 913 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 GLRA3O75311 464 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 TULP3O75386 442 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 HOXD9P28356 352 aaPredicted RBP7.45□□□□□ -1.22
BDNF-209ENST00000420794 CCR2P41597 374 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 CCNHP51946 323 aaPredicted RBP7.45□□□□□ -1.22
BDNF-209ENST00000420794 SETDB1Q15047 1291 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 ACOX1Q15067 660 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 FAM83EQ2M2I3 478 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 SLC5A9Q2M3M2 681 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 TSTD2Q5T7W7 516 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 ARMC3Q5W041 872 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 AP1ARQ63HQ0 302 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 FRA10AC1Q70Z53 315 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 CAMK1DQ8IU85 385 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 MFSD6LQ8IWD5 586 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 APCDD1Q8J025 514 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 CYB5D2Q8WUJ1 264 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 FATE1Q969F0 183 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 MFSD3Q96ES6 412 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 OXNAD1Q96HP4 312 aaPredicted RBP7.45□□□□□ -1.22
BDNF-209ENST00000420794 OMDQ99983 421 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 SYTL2Q9HCH5 934 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 MOSPD1Q9UJG1 213 aa7.45□□□□□ -1.22
BDNF-209ENST00000420794 FBXO5Q9UKT4 447 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms