RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 PGLSO95336 258 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 NDST3O95803 873 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 PDGFBP01127 241 aaPredicted RBP12.59□□□□□ -0.39
TMEM53-206ENST00000420706 ATXN1LP0C7T5 689 aaKnown RBP12.59□□□□□ -0.39
TMEM53-206ENST00000420706 ALADP13716 330 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 CA4P22748 312 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 RPS9P46781 194 aaKnown RBP12.59□□□□□ -0.39
TMEM53-206ENST00000420706 SARNPP82979 210 aaKnown RBP12.59□□□□□ -0.39
TMEM53-206ENST00000420706 SATB1Q01826 763 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 CUL1Q13616 776 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 SLC1A5Q15758 541 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 CRY1Q16526 586 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 ARMC12Q5T9G4 340 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 DENND5AQ6IQ26 1287 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 LRRC8BQ6P9F7 803 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 ZNF534Q76KX8 674 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 SYT13Q7L8C5 426 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 LINC00523Q86TU6 105 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 CAND1Q86VP6 1230 aaKnown RBP12.59□□□□□ -0.39
TMEM53-206ENST00000420706 MMAAQ8IVH4 418 aaKnown RBP12.59□□□□□ -0.39
TMEM53-206ENST00000420706 SLC25A41Q8N5S1 370 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 FLCNQ8NFG4 579 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 MYRIPQ8NFW9 859 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 OR52K1Q8NGK4 314 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 FBXO25Q8TCJ0 367 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 PDCD6IPQ8WUM4 868 aaKnown RBP12.59□□□□□ -0.39
TMEM53-206ENST00000420706 PIH1D2Q8WWB5 315 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 RUBCNQ92622 972 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 ARRDC3Q96B67 414 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 FSD1LQ9BXM9 530 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 OSBPL1AQ9BXW6 950 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 CHRDQ9H2X0 955 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 FBRSQ9HAH7 460 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 ARNT2Q9HBZ2 717 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 CASS4Q9NQ75 786 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 ZDHHC18Q9NUE0 388 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 SHOC2Q9UQ13 582 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 PCDHB9Q9Y5E1 797 aa12.59□□□□□ -0.39
TMEM53-206ENST00000420706 A0A1W2PQ67 120 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 TSPAN11A1L157 253 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 ANKRD66B4E2M5 251 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 C1QTNF3-AMACRE9PGA6 284 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 CTIFO43310 598 aaKnown RBP12.58□□□□□ -0.4
TMEM53-206ENST00000420706 RNASEH1O60930 286 aaKnown RBP12.58□□□□□ -0.4
TMEM53-206ENST00000420706 IL1BP01584 269 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 C7P10643 843 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 MLNP12872 115 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 HLA-DPA1P20036 260 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 TNFRSF8P28908 595 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 ECHS1P30084 290 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 SLC8A1P32418 973 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 CHRNA4P43681 627 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 RPS14P62263 151 aaKnown RBP12.58□□□□□ -0.4
TMEM53-206ENST00000420706 CDH17Q12864 832 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 MSLNQ13421 630 aaPredicted RBP12.58□□□□□ -0.4
TMEM53-206ENST00000420706 QPCTQ16769 361 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 ZNF805Q5CZA5 627 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 SIRPB2Q5JXA9 342 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 FAM46CQ5VWP2 391 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 CWF19L1Q69YN2 538 aaKnown RBP12.58□□□□□ -0.4
TMEM53-206ENST00000420706 PPP1R21Q6ZMI0 780 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 CCNI2Q6ZMN8 369 aaPredicted RBP12.58□□□□□ -0.4
TMEM53-206ENST00000420706 DSG4Q86SJ6 1040 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 ZSWIM9Q86XI8 627 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 TMPRSS6Q8IU80 811 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 LPCAT1Q8NF37 534 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 SPOCK2Q92563 424 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 PWWP2AQ96N64 755 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 SERPINB12Q96P63 405 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 PARD6BQ9BYG5 372 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 FAM129AQ9BZQ8 928 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 MKRN2Q9H000 416 aaKnown RBP12.58□□□□□ -0.4
TMEM53-206ENST00000420706 MFSD1Q9H3U5 465 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 C2orf42Q9NWW7 574 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 DKK3Q9UBP4 350 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 PHTF1Q9UMS5 762 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 PPIL1Q9Y3C6 166 aa12.58□□□□□ -0.4
TMEM53-206ENST00000420706 C16orf96A6NNT2 1141 aa12.57□□□□□ -0.4
TMEM53-206ENST00000420706 KPNA3O00505 521 aaPredicted RBP12.57□□□□□ -0.4
TMEM53-206ENST00000420706 PI15O43692 258 aa12.57□□□□□ -0.4
TMEM53-206ENST00000420706 AVILO75366 819 aa12.57□□□□□ -0.4
TMEM53-206ENST00000420706 FGF1P05230 155 aa12.57□□□□□ -0.4
TMEM53-206ENST00000420706 DCNP07585 359 aaKnown RBP12.57□□□□□ -0.4
TMEM53-206ENST00000420706 TIMP2P16035 220 aa12.57□□□□□ -0.4
TMEM53-206ENST00000420706 TPH1P17752 444 aa12.57□□□□□ -0.4
TMEM53-206ENST00000420706 TNNT3P45378 269 aaPredicted RBP12.57□□□□□ -0.4
TMEM53-206ENST00000420706 PSMD8P48556 350 aa12.57□□□□□ -0.4
TMEM53-206ENST00000420706 NPY2RP49146 381 aa12.57□□□□□ -0.4
TMEM53-206ENST00000420706 METAP1P53582 386 aa12.57□□□□□ -0.4
TMEM53-206ENST00000420706 RPL26P61254 145 aaKnown RBP12.57□□□□□ -0.4
TMEM53-206ENST00000420706 VSNL1P62760 191 aa12.57□□□□□ -0.4
TMEM53-206ENST00000420706 POLR2LP62875 67 aaKnown RBP12.57□□□□□ -0.4
TMEM53-206ENST00000420706 CBLBQ13191 982 aa12.57□□□□□ -0.4
TMEM53-206ENST00000420706 GALNT3Q14435 633 aa12.57□□□□□ -0.4
TMEM53-206ENST00000420706 HLTFQ14527 1009 aaKnown RBP eCLIP12.57□□□□□ -0.4
TMEM53-206ENST00000420706 CST6Q15828 149 aa12.57□□□□□ -0.4
TMEM53-206ENST00000420706 POM121L1PQ3SYA9 428 aa12.57□□□□□ -0.4
TMEM53-206ENST00000420706 FNBP1LQ5T0N5 605 aa12.57□□□□□ -0.4
TMEM53-206ENST00000420706 ZNF776Q68DI1 518 aaPredicted RBP12.57□□□□□ -0.4
TMEM53-206ENST00000420706 WDR93Q6P2C0 686 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms