RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 CCDC173Q0VFZ6 552 aa18.82■□□□□ 0.6
PTCD3-204ENST00000418628 TRAF2Q12933 501 aa18.82■□□□□ 0.6
PTCD3-204ENST00000418628 DUOXA1Q1HG43 343 aa18.82■□□□□ 0.6
PTCD3-204ENST00000418628 KIAA1161Q6NSJ0 714 aa18.82■□□□□ 0.6
PTCD3-204ENST00000418628 HORMAD1Q86X24 394 aa18.82■□□□□ 0.6
PTCD3-204ENST00000418628 ZCCHC9Q8N567 271 aaKnown RBP18.82■□□□□ 0.6
PTCD3-204ENST00000418628 CEP76Q8TAP6 659 aa18.82■□□□□ 0.6
PTCD3-204ENST00000418628 ACTL9Q8TC94 416 aa18.82■□□□□ 0.6
PTCD3-204ENST00000418628 SEMA3CQ99985 751 aa18.82■□□□□ 0.6
PTCD3-204ENST00000418628 HINFPQ9BQA5 517 aa18.82■□□□□ 0.6
PTCD3-204ENST00000418628 TLR10Q9BXR5 811 aa18.82■□□□□ 0.6
PTCD3-204ENST00000418628 SCUBE2Q9NQ36 999 aa18.82■□□□□ 0.6
PTCD3-204ENST00000418628 ITM2BQ9Y287 266 aa18.82■□□□□ 0.6
PTCD3-204ENST00000418628 DCHS1Q96JQ0 3298 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 TBC1D3DA0A087WVF3 549 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 TBC1D3IA0A087WXS9 549 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 TBC1D3EA0A087X179 549 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 TBC1D3KA0A087X1G2 549 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 A0A1B0GTW7 788 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 LNP1A1A4G5 178 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 TBC1D3FA6NER0 549 aaPredicted RBP18.81■□□□□ 0.6
PTCD3-204ENST00000418628 FAM47DPA6NHR8 397 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 HACD1B0YJ81 288 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 TBC1D3LB9A6J9 549 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 TSPAN6O43657 245 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 RNGTTO60942 597 aaKnown RBP18.81■□□□□ 0.6
PTCD3-204ENST00000418628 PTMAP06454 111 aaKnown RBP18.81■□□□□ 0.6
PTCD3-204ENST00000418628 MMP2P08253 660 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 TBC1D3HP0C7X1 549 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 CES1P23141 567 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 PTPN3P26045 913 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 MMP12P39900 470 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 OTUD4Q01804 1114 aaKnown RBP18.81■□□□□ 0.6
PTCD3-204ENST00000418628 DSC2Q02487 901 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 BCL2L1Q07817 233 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 NIPAL4Q0D2K0 466 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 AP1B1Q10567 949 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 WASHC5Q12768 1159 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 SF3A2Q15428 464 aaKnown RBP18.81■□□□□ 0.6
PTCD3-204ENST00000418628 UGP2Q16851 508 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 ZNF284Q2VY69 593 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 SLC45A4Q5BKX6 768 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 TRIM61Q5EBN2 209 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 TBC1D3GQ6DHY5 549 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 TBC1D3CQ6IPX1 549 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 TBC1D3Q8IZP1 549 aaPredicted RBP18.81■□□□□ 0.6
PTCD3-204ENST00000418628 TMEM145Q8NBT3 493 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 TFB1MQ8WVM0 346 aaKnown RBP18.81■□□□□ 0.6
PTCD3-204ENST00000418628 TADA1Q96BN2 335 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 HAUS1Q96CS2 278 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 CARD9Q9H257 536 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 DMTF1Q9Y222 760 aa18.81■□□□□ 0.6
PTCD3-204ENST00000418628 A0A1W2PQU0 124 aa18.8■□□□□ 0.6
PTCD3-204ENST00000418628 BCAT2O15382 392 aaPredicted RBP18.8■□□□□ 0.6
PTCD3-204ENST00000418628 TJP3O95049 919 aa18.8■□□□□ 0.6
PTCD3-204ENST00000418628 JCHAINP01591 159 aa18.8■□□□□ 0.6
PTCD3-204ENST00000418628 CETN2P41208 172 aa18.8■□□□□ 0.6
PTCD3-204ENST00000418628 GRIA4P48058 902 aa18.8■□□□□ 0.6
PTCD3-204ENST00000418628 FGL2Q14314 439 aa18.8■□□□□ 0.6
PTCD3-204ENST00000418628 SLC14A2Q15849 920 aa18.8■□□□□ 0.6
PTCD3-204ENST00000418628 TMEM52BQ4KMG9 183 aa18.8■□□□□ 0.6
PTCD3-204ENST00000418628 TEX44Q53QW1 395 aa18.8■□□□□ 0.6
PTCD3-204ENST00000418628 LRRC73Q5JTD7 316 aa18.8■□□□□ 0.6
PTCD3-204ENST00000418628 RGL4Q8IZJ4 473 aa18.8■□□□□ 0.6
PTCD3-204ENST00000418628 ASB12Q8WXK4 309 aa18.8■□□□□ 0.6
PTCD3-204ENST00000418628 TM9SF3Q9HD45 589 aa18.8■□□□□ 0.6
PTCD3-204ENST00000418628 PPIL1Q9Y3C6 166 aa18.8■□□□□ 0.6
PTCD3-204ENST00000418628 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.8■□□□□ 0.6
PTCD3-204ENST00000418628 PLXNB3Q9ULL4 1909 aa18.8■□□□□ 0.6
PTCD3-204ENST00000418628 A0A1W2PQ67 120 aa18.79■□□□□ 0.6
PTCD3-204ENST00000418628 A0A1W2PR77 199 aa18.79■□□□□ 0.6
PTCD3-204ENST00000418628 RIOK3O14730 519 aaKnown RBP18.79■□□□□ 0.6
PTCD3-204ENST00000418628 MTSS1O43312 755 aa18.79■□□□□ 0.6
PTCD3-204ENST00000418628 PGLSO95336 258 aa18.79■□□□□ 0.6
PTCD3-204ENST00000418628 RACK1P63244 317 aaKnown RBP18.79■□□□□ 0.6
PTCD3-204ENST00000418628 IRX4P78413 519 aa18.79■□□□□ 0.6
PTCD3-204ENST00000418628 BNC1Q01954 994 aa18.79■□□□□ 0.6
PTCD3-204ENST00000418628 ELP6Q0PNE2 266 aa18.79■□□□□ 0.6
PTCD3-204ENST00000418628 RALGDSQ12967 914 aa18.79■□□□□ 0.6
PTCD3-204ENST00000418628 SETMARQ53H47 684 aaPredicted RBP18.79■□□□□ 0.6
PTCD3-204ENST00000418628 SEL1L3Q68CR1 1132 aa18.79■□□□□ 0.6
PTCD3-204ENST00000418628 NAPEPLDQ6IQ20 393 aa18.79■□□□□ 0.6
PTCD3-204ENST00000418628 B4GALNT4Q76KP1 1039 aa18.79■□□□□ 0.6
PTCD3-204ENST00000418628 ZC3H18Q86VM9 953 aaKnown RBP18.79■□□□□ 0.6
PTCD3-204ENST00000418628 SNX19Q92543 992 aa18.79■□□□□ 0.6
PTCD3-204ENST00000418628 IMP4Q96G21 291 aaKnown RBP18.79■□□□□ 0.6
PTCD3-204ENST00000418628 TEKT5Q96M29 485 aa18.79■□□□□ 0.6
PTCD3-204ENST00000418628 MCCC1Q96RQ3 725 aaPredicted RBP18.79■□□□□ 0.6
PTCD3-204ENST00000418628 C1QTNF2Q9BXJ5 285 aa18.79■□□□□ 0.6
PTCD3-204ENST00000418628 TDRD1Q9BXT4 1180 aaKnown RBP18.79■□□□□ 0.6
PTCD3-204ENST00000418628 CEP41Q9BYV8 373 aa18.79■□□□□ 0.6
PTCD3-204ENST00000418628 PCDH12Q9NPG4 1184 aa18.79■□□□□ 0.6
PTCD3-204ENST00000418628 RXFP3Q9NSD7 469 aa18.79■□□□□ 0.6
PTCD3-204ENST00000418628 HAUS2Q9NVX0 235 aa18.79■□□□□ 0.6
PTCD3-204ENST00000418628 SLC6A14Q9UN76 642 aa18.79■□□□□ 0.6
PTCD3-204ENST00000418628 PCDHGC4Q9Y5F7 938 aa18.79■□□□□ 0.6
PTCD3-204ENST00000418628 TCRBV7S2A1N4TA0A589 114 aa18.78■□□□□ 0.6
PTCD3-204ENST00000418628 PRR5-ARHGAP8B1AHC4 643 aa18.78■□□□□ 0.6
PTCD3-204ENST00000418628 WNT9AO14904 365 aa18.78■□□□□ 0.6
PTCD3-204ENST00000418628 KHNYNO15037 678 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms