RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 A0A1W2PRU2 124 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 WDR91A4D1P6 747 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 J3KR12 359 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 QSOX1O00391 747 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 TPP1O14773 563 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 CRCPO75575 148 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 POP4O95707 220 aaKnown RBP8.45□□□□□ -1.06
USP54-203ENST00000418501 GSRP00390 522 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 SPATA31D3P0C874 917 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 CYP4F8P98187 520 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 PDGFRLQ15198 375 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 LRRC8EQ6NSJ5 796 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 SPATA31D4Q6ZUB0 917 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 TAS2R42Q7RTR8 314 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 KLHDC8BQ8IXV7 354 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 OXNAD1Q96HP4 312 aaPredicted RBP8.45□□□□□ -1.06
USP54-203ENST00000418501 MRGPRX2Q96LB1 330 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 PLA2G4CQ9UP65 541 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 STK38LQ9Y2H1 464 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 ZNF7P17097 686 aaPredicted RBP8.45□□□□□ -1.06
USP54-203ENST00000418501 BMPR2Q13873 1038 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 TEDDM1Q5T9Z0 273 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 N4BP2L1Q5TBK1 243 aaPredicted RBP8.45□□□□□ -1.06
USP54-203ENST00000418501 RNF43Q68DV7 783 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 GRAMD4Q6IC98 578 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 FAM47EQ6ZV65 393 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 AHI1Q8N157 1196 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 NKAPQ8N5F7 415 aaKnown RBP8.45□□□□□ -1.06
USP54-203ENST00000418501 CNTD1Q8N815 330 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 OR4L1Q8NH43 312 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 SPPL3Q8TCT6 385 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 ACE2Q9BYF1 805 aaPredicted RBP8.45□□□□□ -1.06
USP54-203ENST00000418501 CRISPLD1Q9H336 500 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 RABEP2Q9H5N1 569 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 POPDC3Q9HBV1 291 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 CHRAC1Q9NRG0 131 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 SNX15Q9NRS6 342 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 TAS2R13Q9NYV9 303 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 SORCS3Q9UPU3 1222 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 PCDHB1Q9Y5F3 818 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 C5orf67F2Z3F1 127 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 TMCC1O94876 653 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 OLFM2O95897 454 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 MT-CYBP00156 380 aaPredicted RBP8.45□□□□□ -1.06
USP54-203ENST00000418501 TCTN1Q2MV58 587 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 LILRA6Q6PI73 481 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 KDELC1Q6UW63 502 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 TRPM8Q7Z2W7 1104 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 IGDCC3Q8IVU1 814 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 CPA6Q8N4T0 437 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 DCLK2Q8N568 766 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 LRRN4Q8WUT4 740 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 ISG20Q96AZ6 181 aaKnown RBP8.45□□□□□ -1.06
USP54-203ENST00000418501 LRIG1Q96JA1 1093 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 KLF6Q99612 283 aaPredicted RBP8.45□□□□□ -1.06
USP54-203ENST00000418501 CDH19Q9H159 772 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 MLXIPLQ9NP71 852 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 KCTD5Q9NXV2 234 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 VTI1BQ9UEU0 232 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 TANC1Q9C0D5 1861 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 C2orf78A6NCI8 922 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 TYROBPO43914 113 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 SNX3O60493 162 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 TRIM13O60858 407 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 IL1BP01584 269 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 RHOP08100 348 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 TCF3P15923 654 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 ADRA1AP35348 466 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 ACVRL1P37023 503 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 NRLP54845 237 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 MAXP61244 160 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 ATP6V0D1P61421 351 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 CRADDP78560 199 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 MSLNQ13421 630 aaPredicted RBP8.45□□□□□ -1.06
USP54-203ENST00000418501 EFTUD2Q15029 972 aaKnown RBP eCLIP8.45□□□□□ -1.06
USP54-203ENST00000418501 CHI3L2Q15782 390 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 FAM133BQ5BKY9 247 aaKnown RBP8.45□□□□□ -1.06
USP54-203ENST00000418501 NADSYN1Q6IA69 706 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 ACAD11Q709F0 780 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 C7orf26Q96N11 449 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 MRPL57Q9BQC6 102 aaKnown RBP8.45□□□□□ -1.06
USP54-203ENST00000418501 TRIM56Q9BRZ2 755 aaKnown RBP8.45□□□□□ -1.06
USP54-203ENST00000418501 FEM1AQ9BSK4 669 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 ABCB8Q9NUT2 735 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 PKD2L2Q9NZM6 624 aa8.45□□□□□ -1.06
USP54-203ENST00000418501 RRP15Q9Y3B9 282 aaKnown RBP8.45□□□□□ -1.06
USP54-203ENST00000418501 A0A1W2PPM1 405 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 LILRB3O75022 631 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 SRP72O76094 671 aaKnown RBP8.44□□□□□ -1.06
USP54-203ENST00000418501 CHEK2O96017 543 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 LTA4HP09960 611 aaKnown RBP8.44□□□□□ -1.06
USP54-203ENST00000418501 CSKP41240 450 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 CNGA3Q16281 694 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 ALG1LQ6GMV1 187 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 ERAP2Q6P179 960 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 ARHGAP36Q6ZRI8 547 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 ZNF534Q76KX8 674 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 ZNF683Q8IZ20 524 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 CYP4X1Q8N118 509 aa8.44□□□□□ -1.06
USP54-203ENST00000418501 DCUN1D1Q96GG9 259 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms