RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 UPF1Q92900 1129 aaKnown RBP eCLIP13.32□□□□□ -0.28
BDNF-208ENST00000418212 SLC25A23Q9BV35 468 aa13.32□□□□□ -0.28
BDNF-208ENST00000418212 THG1LQ9NWX6 298 aaKnown RBP13.32□□□□□ -0.28
BDNF-208ENST00000418212 CFAP97Q9P2B7 532 aa13.32□□□□□ -0.28
BDNF-208ENST00000418212 ANKRD6Q9Y2G4 727 aa13.32□□□□□ -0.28
BDNF-208ENST00000418212 ASCC3Q8N3C0 2202 aaKnown RBP13.31□□□□□ -0.28
BDNF-208ENST00000418212 E9PAM4 449 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 CYP7B1O75881 506 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 FESP07332 822 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 MLNP12872 115 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 VCLP18206 1134 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 PTGIRP43119 386 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 PTPN9P43378 593 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 PIK3CGP48736 1102 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 ALDH6A1Q02252 535 aaKnown RBP13.31□□□□□ -0.28
BDNF-208ENST00000418212 SEMG2Q02383 582 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 NRF1Q16656 503 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 LACTB2Q53H82 288 aaPredicted RBP13.31□□□□□ -0.28
BDNF-208ENST00000418212 ESRP1Q6NXG1 681 aaKnown RBP13.31□□□□□ -0.28
BDNF-208ENST00000418212 CHPFQ8IZ52 775 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 ACBD6Q9BR61 282 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 EVLQ9UI08 416 aaPredicted RBP13.31□□□□□ -0.28
BDNF-208ENST00000418212 COL14A1Q05707 1796 aaKnown RBP13.31□□□□□ -0.28
BDNF-208ENST00000418212 RPTORQ8N122 1335 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 PRR5-ARHGAP8B1AHC4 643 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 METTL18O95568 372 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 UGT2B4P06133 528 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 F7P08709 466 aaPredicted RBP13.31□□□□□ -0.28
BDNF-208ENST00000418212 GLUD2P49448 558 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 ARHGAP8P85298 464 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 CNTN1Q12860 1018 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 FRG1Q14331 258 aaKnown RBP13.31□□□□□ -0.28
BDNF-208ENST00000418212 INSCQ1MX18 579 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 DCAF12L1Q5VU92 463 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 OR4L1Q8NH43 312 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 RPL10LQ96L21 214 aaKnown RBP13.31□□□□□ -0.28
BDNF-208ENST00000418212 RHOJQ9H4E5 214 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 SRRM3A6NNA2 597 aaPredicted RBP13.31□□□□□ -0.28
BDNF-208ENST00000418212 CD3EAPO15446 510 aaKnown RBP13.31□□□□□ -0.28
BDNF-208ENST00000418212 LBPP18428 481 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 MAPK1P28482 360 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 MC4RP32245 332 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 TTPAP49638 278 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 ACLYP53396 1101 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 SLC34A1Q06495 639 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 NAB1Q13506 487 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 FAM228AQ86W67 206 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 MAGEB10Q96LZ2 347 aaPredicted RBP13.31□□□□□ -0.28
BDNF-208ENST00000418212 ZCCHC2Q9C0B9 1178 aaKnown RBP13.31□□□□□ -0.28
BDNF-208ENST00000418212 NMUR2Q9GZQ4 415 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 PRDM16Q9HAZ2 1276 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 SAR1AQ9NR31 198 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 SCN3BQ9NY72 215 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 SELENONQ9NZV5 590 aa13.31□□□□□ -0.28
BDNF-208ENST00000418212 PARP4Q9UKK3 1724 aaKnown RBP13.31□□□□□ -0.28
BDNF-208ENST00000418212 NEDD8-MDP1E9PL57 170 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 RGS20O76081 388 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 ANXA5P08758 320 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 FASP25445 335 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 MPP1Q00013 466 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 MTA1Q13330 715 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 TP53BP2Q13625 1128 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 DLG2Q15700 870 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 PPP1R15BQ5SWA1 713 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 LRRC49Q8IUZ0 686 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 STK40Q8N2I9 435 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 HJURPQ8NCD3 748 aaPredicted RBP13.3□□□□□ -0.28
BDNF-208ENST00000418212 OR6Y1Q8NGX8 325 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 PSMG2Q969U7 264 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 ZNF570Q96NI8 536 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 KLHL4Q9C0H6 718 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 ROBO1Q9Y6N7 1651 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 CHD2O14647 1828 aaKnown RBP13.3□□□□□ -0.28
BDNF-208ENST00000418212 RGPD2P0DJD1 1756 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 PHLPP1O60346 1717 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 STBD1O95210 358 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 OCM2P0CE71 109 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 OCMP0CE72 109 aaPredicted RBP13.3□□□□□ -0.28
BDNF-208ENST00000418212 DGKAP23743 735 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 S100A3P33764 101 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 MSLNQ13421 630 aaPredicted RBP13.3□□□□□ -0.28
BDNF-208ENST00000418212 SPRED3Q2MJR0 410 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 AP5B1Q2VPB7 878 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 HFE2Q6ZVN8 426 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 PLD3Q8IV08 490 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 CYP4X1Q8N118 509 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 NKAPQ8N5F7 415 aaKnown RBP13.3□□□□□ -0.28
BDNF-208ENST00000418212 ACMSDQ8TDX5 336 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.3□□□□□ -0.28
BDNF-208ENST00000418212 ITM2BQ9Y287 266 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 DUOX1Q9NRD9 1551 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 MAGEA13PA6NCF6 341 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 IQCF5A8MTL0 148 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 GLUD1P00367 558 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 WASP42768 502 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 CCT8P50990 548 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 NCALDP61601 193 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 OGDHQ02218 1023 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 ABRQ12979 859 aa13.3□□□□□ -0.28
BDNF-208ENST00000418212 ARL14EPQ8N8R7 260 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms