RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 CHP1Q99653 195 aa15.47■□□□□ 0.07
NUP50-204ENST00000417702 TRIM5Q9C035 493 aa15.47■□□□□ 0.07
NUP50-204ENST00000417702 RBSNQ9H1K0 784 aa15.47■□□□□ 0.07
NUP50-204ENST00000417702 NHEJ1Q9H9Q4 299 aaPredicted RBP15.47■□□□□ 0.07
NUP50-204ENST00000417702 TOR4AQ9NXH8 423 aa15.47■□□□□ 0.07
NUP50-204ENST00000417702 FAM221BA6H8Z2 402 aa15.46■□□□□ 0.07
NUP50-204ENST00000417702 C1QTNF9BB2RNN3 333 aa15.46■□□□□ 0.07
NUP50-204ENST00000417702 AKR1B15C9JRZ8 316 aaPredicted RBP15.46■□□□□ 0.07
NUP50-204ENST00000417702 ENC1O14682 589 aa15.46■□□□□ 0.07
NUP50-204ENST00000417702 PROS1P07225 676 aa15.46■□□□□ 0.07
NUP50-204ENST00000417702 KRT7P08729 469 aa15.46■□□□□ 0.07
NUP50-204ENST00000417702 C1QTNF9P0C862 333 aa15.46■□□□□ 0.07
NUP50-204ENST00000417702 ITIH2P19823 946 aa15.46■□□□□ 0.07
NUP50-204ENST00000417702 SCNN1BP51168 640 aa15.46■□□□□ 0.07
NUP50-204ENST00000417702 AP1S1P61966 158 aa15.46■□□□□ 0.07
NUP50-204ENST00000417702 PDK2Q15119 407 aa15.46■□□□□ 0.07
NUP50-204ENST00000417702 TMEM52BQ4KMG9 183 aa15.46■□□□□ 0.07
NUP50-204ENST00000417702 ZFYVE27Q5T4F4 411 aa15.46■□□□□ 0.07
NUP50-204ENST00000417702 SARM1Q6SZW1 724 aa15.46■□□□□ 0.07
NUP50-204ENST00000417702 LRRC49Q8IUZ0 686 aa15.46■□□□□ 0.07
NUP50-204ENST00000417702 MAP7D3Q8IWC1 876 aa15.46■□□□□ 0.07
NUP50-204ENST00000417702 SLC22A18ASQ8N1D0 253 aa15.46■□□□□ 0.07
NUP50-204ENST00000417702 TSC1Q92574 1164 aa15.46■□□□□ 0.07
NUP50-204ENST00000417702 WRAP53Q9BUR4 548 aaKnown RBP15.46■□□□□ 0.07
NUP50-204ENST00000417702 PCDH12Q9NPG4 1184 aa15.46■□□□□ 0.07
NUP50-204ENST00000417702 DNAJC28Q9NX36 388 aa15.46■□□□□ 0.07
NUP50-204ENST00000417702 ATP8A1Q9Y2Q0 1164 aa15.46■□□□□ 0.07
NUP50-204ENST00000417702 TMEM110-MUSTN1A8MSY1 372 aa15.45■□□□□ 0.06
NUP50-204ENST00000417702 DKK1O94907 266 aa15.45■□□□□ 0.06
NUP50-204ENST00000417702 DGKAP23743 735 aa15.45■□□□□ 0.06
NUP50-204ENST00000417702 MAN1A1P33908 653 aa15.45■□□□□ 0.06
NUP50-204ENST00000417702 POLR2LP62875 67 aaKnown RBP15.45■□□□□ 0.06
NUP50-204ENST00000417702 SLC10A7Q0GE19 358 aa15.45■□□□□ 0.06
NUP50-204ENST00000417702 MMRN1Q13201 1228 aa15.45■□□□□ 0.06
NUP50-204ENST00000417702 PDE1CQ14123 709 aaPredicted RBP15.45■□□□□ 0.06
NUP50-204ENST00000417702 KANSL1Q7Z3B3 1105 aa15.45■□□□□ 0.06
NUP50-204ENST00000417702 PARGQ86W56 976 aa15.45■□□□□ 0.06
NUP50-204ENST00000417702 FAM71BQ8TC56 605 aa15.45■□□□□ 0.06
NUP50-204ENST00000417702 CENPTQ96BT3 561 aa15.45■□□□□ 0.06
NUP50-204ENST00000417702 GPR27Q9NS67 375 aa15.45■□□□□ 0.06
NUP50-204ENST00000417702 SPTLC3Q9NUV7 552 aa15.45■□□□□ 0.06
NUP50-204ENST00000417702 PCDHGA1Q9Y5H4 931 aa15.45■□□□□ 0.06
NUP50-204ENST00000417702 TDRD6O60522 2096 aaKnown RBP15.44■□□□□ 0.06
NUP50-204ENST00000417702 SPTY2D1-AS1A0A0U1RR47 76 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.44■□□□□ 0.06
NUP50-204ENST00000417702 TMEM8BA6NDV4 472 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 NEMP2A6NFY4 417 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 H3BM21 787 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 TOR1BO14657 336 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 RIOK3O14730 519 aaKnown RBP15.44■□□□□ 0.06
NUP50-204ENST00000417702 MUSKO15146 869 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 MAFKO60675 156 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 PIAS2O75928 621 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 CD48P09326 243 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 C1SP09871 688 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 CDK4P11802 303 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 IL4RP24394 825 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 ARSEP51690 589 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 THOP1P52888 689 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 TAS2R40P59535 323 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 PFN3P60673 137 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 HNRNPKP61978 463 aaKnown RBP eCLIP15.44■□□□□ 0.06
NUP50-204ENST00000417702 DPYSL3Q14195 570 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 PTK2BQ14289 1009 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 FZD2Q14332 565 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 MESDQ14696 234 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 ATP13A4Q4VNC1 1196 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 ZNF542PQ5EBM4 170 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 MARC1Q5VT66 337 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 GAS2L3Q86XJ1 694 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 RHOT2Q8IXI1 618 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 GALNT15Q8N3T1 639 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 SLC35G2Q8TBE7 412 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 GATA6Q92908 595 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 ECHDC3Q96DC8 303 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 ZNF670Q9BS34 389 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 SCUBE2Q9NQ36 999 aa15.44■□□□□ 0.06
NUP50-204ENST00000417702 IGF2RP11717 2491 aa15.43■□□□□ 0.06
NUP50-204ENST00000417702 A0A1W2PQ67 120 aa15.43■□□□□ 0.06
NUP50-204ENST00000417702 LZTS3O60299 673 aaPredicted RBP15.43■□□□□ 0.06
NUP50-204ENST00000417702 RFPL3O75679 317 aa15.43■□□□□ 0.06
NUP50-204ENST00000417702 PEX11BO96011 259 aa15.43■□□□□ 0.06
NUP50-204ENST00000417702 ALPPL2P10696 532 aa15.43■□□□□ 0.06
NUP50-204ENST00000417702 C6P13671 934 aa15.43■□□□□ 0.06
NUP50-204ENST00000417702 CKMT2P17540 419 aa15.43■□□□□ 0.06
NUP50-204ENST00000417702 IGFALSP35858 605 aa15.43■□□□□ 0.06
NUP50-204ENST00000417702 ARHGAP25P42331 645 aa15.43■□□□□ 0.06
NUP50-204ENST00000417702 MMP13P45452 471 aa15.43■□□□□ 0.06
NUP50-204ENST00000417702 YPEL5P62699 121 aa15.43■□□□□ 0.06
NUP50-204ENST00000417702 TBX2Q13207 712 aaPredicted RBP15.43■□□□□ 0.06
NUP50-204ENST00000417702 DNAJC3Q13217 504 aa15.43■□□□□ 0.06
NUP50-204ENST00000417702 ZNF211Q13398 564 aaPredicted RBP15.43■□□□□ 0.06
NUP50-204ENST00000417702 LRRC14Q15048 493 aa15.43■□□□□ 0.06
NUP50-204ENST00000417702 ANKRD20A8PQ5CZ79 823 aa15.43■□□□□ 0.06
NUP50-204ENST00000417702 DHRS13Q6UX07 377 aa15.43■□□□□ 0.06
NUP50-204ENST00000417702 CCNI2Q6ZMN8 369 aaPredicted RBP15.43■□□□□ 0.06
NUP50-204ENST00000417702 TMPRSS7Q7RTY8 843 aa15.43■□□□□ 0.06
NUP50-204ENST00000417702 ZSWIM9Q86XI8 627 aa15.43■□□□□ 0.06
NUP50-204ENST00000417702 CPNE8Q86YQ8 564 aa15.43■□□□□ 0.06
NUP50-204ENST00000417702 SLC25A45Q8N413 288 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms