RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 SLC5A9Q2M3M2 681 aa14.59□□□□□ -0.07
HDAC9-208ENST00000417496 POTEHQ6S545 545 aa14.59□□□□□ -0.07
HDAC9-208ENST00000417496 PIWIL4Q7Z3Z4 852 aaKnown RBP14.59□□□□□ -0.07
HDAC9-208ENST00000417496 TICAM1Q8IUC6 712 aa14.59□□□□□ -0.07
HDAC9-208ENST00000417496 PELI3Q8N2H9 469 aa14.59□□□□□ -0.07
HDAC9-208ENST00000417496 NCSTNQ92542 709 aa14.59□□□□□ -0.07
HDAC9-208ENST00000417496 VPS28Q9UK41 221 aa14.59□□□□□ -0.07
HDAC9-208ENST00000417496 PRSS51A0A1B0GVH4 220 aa14.59□□□□□ -0.07
HDAC9-208ENST00000417496 PRORSD1PA6NEY8 169 aa14.59□□□□□ -0.07
HDAC9-208ENST00000417496 CCDC160A6NGH7 325 aa14.59□□□□□ -0.07
HDAC9-208ENST00000417496 AP3B1O00203 1094 aa14.59□□□□□ -0.07
HDAC9-208ENST00000417496 GJB3O75712 270 aa14.59□□□□□ -0.07
HDAC9-208ENST00000417496 RTN3O95197 1032 aaPredicted RBP14.59□□□□□ -0.07
HDAC9-208ENST00000417496 NME5P56597 212 aa14.59□□□□□ -0.07
HDAC9-208ENST00000417496 TMEM207Q6UWW9 146 aa14.59□□□□□ -0.07
HDAC9-208ENST00000417496 RBM44Q6ZP01 1051 aaKnown RBP14.59□□□□□ -0.07
HDAC9-208ENST00000417496 SETD3Q86TU7 594 aaPredicted RBP14.59□□□□□ -0.07
HDAC9-208ENST00000417496 CUZD1Q86UP6 607 aa14.59□□□□□ -0.07
HDAC9-208ENST00000417496 PIM3Q86V86 326 aa14.59□□□□□ -0.07
HDAC9-208ENST00000417496 TMEM102Q8N9M5 508 aaPredicted RBP14.59□□□□□ -0.07
HDAC9-208ENST00000417496 AGO3Q9H9G7 860 aaKnown RBP14.59□□□□□ -0.07
HDAC9-208ENST00000417496 NMUR1Q9HB89 426 aa14.59□□□□□ -0.07
HDAC9-208ENST00000417496 KCTD3Q9Y597 815 aa14.59□□□□□ -0.07
HDAC9-208ENST00000417496 C9JVG2 144 aa14.58□□□□□ -0.07
HDAC9-208ENST00000417496 J3KR12 359 aa14.58□□□□□ -0.07
HDAC9-208ENST00000417496 PPP6CO00743 305 aa14.58□□□□□ -0.07
HDAC9-208ENST00000417496 PSMD3O43242 534 aa14.58□□□□□ -0.07
HDAC9-208ENST00000417496 IGLV3-25P01717 112 aa14.58□□□□□ -0.07
HDAC9-208ENST00000417496 SLC5A3P53794 718 aa14.58□□□□□ -0.07
HDAC9-208ENST00000417496 PRKAA2P54646 552 aa14.58□□□□□ -0.07
HDAC9-208ENST00000417496 CDH13P55290 713 aa14.58□□□□□ -0.07
HDAC9-208ENST00000417496 PTPRCAPQ14761 206 aa14.58□□□□□ -0.07
HDAC9-208ENST00000417496 FAM110CQ1W6H9 321 aa14.58□□□□□ -0.07
HDAC9-208ENST00000417496 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.58□□□□□ -0.07
HDAC9-208ENST00000417496 TECRLQ5HYJ1 363 aa14.58□□□□□ -0.07
HDAC9-208ENST00000417496 ZFP1Q6P2D0 407 aa14.58□□□□□ -0.07
HDAC9-208ENST00000417496 FAM110BQ8TC76 370 aa14.58□□□□□ -0.07
HDAC9-208ENST00000417496 LRTOMTQ8WZ04 291 aa14.58□□□□□ -0.07
HDAC9-208ENST00000417496 EXT2Q93063 718 aa14.58□□□□□ -0.07
HDAC9-208ENST00000417496 DNAJC1Q96KC8 554 aaKnown RBP14.58□□□□□ -0.07
HDAC9-208ENST00000417496 PRICKLE1Q96MT3 831 aaPredicted RBP14.58□□□□□ -0.07
HDAC9-208ENST00000417496 HAPLN3Q96S86 360 aa14.58□□□□□ -0.07
HDAC9-208ENST00000417496 ALG9Q9H6U8 611 aa14.58□□□□□ -0.07
HDAC9-208ENST00000417496 ENTPD7Q9NQZ7 604 aa14.58□□□□□ -0.07
HDAC9-208ENST00000417496 IPO11Q9UI26 975 aaKnown RBP14.58□□□□□ -0.07
HDAC9-208ENST00000417496 CRYL1Q9Y2S2 319 aa14.58□□□□□ -0.07
HDAC9-208ENST00000417496 PTGDR2Q9Y5Y4 395 aa14.58□□□□□ -0.07
HDAC9-208ENST00000417496 DICER1Q9UPY3 1922 aaKnown RBP14.58□□□□□ -0.08
HDAC9-208ENST00000417496 TRPC5OSA6NMA1 111 aa14.58□□□□□ -0.08
HDAC9-208ENST00000417496 PSMD12O00232 456 aaPredicted RBP14.58□□□□□ -0.08
HDAC9-208ENST00000417496 VILLO15195 856 aa14.58□□□□□ -0.08
HDAC9-208ENST00000417496 UBDO15205 165 aa14.58□□□□□ -0.08
HDAC9-208ENST00000417496 NPHS1O60500 1241 aa14.58□□□□□ -0.08
HDAC9-208ENST00000417496 IPO13O94829 963 aaKnown RBP14.58□□□□□ -0.08
HDAC9-208ENST00000417496 CHRNA1P02708 482 aa14.58□□□□□ -0.08
HDAC9-208ENST00000417496 CCR1P32246 355 aa14.58□□□□□ -0.08
HDAC9-208ENST00000417496 CPT1AP50416 773 aa14.58□□□□□ -0.08
HDAC9-208ENST00000417496 GEMP55040 296 aa14.58□□□□□ -0.08
HDAC9-208ENST00000417496 PURAQ00577 322 aaKnown RBP14.58□□□□□ -0.08
HDAC9-208ENST00000417496 EIF4EBP2Q13542 120 aaPredicted RBP14.58□□□□□ -0.08
HDAC9-208ENST00000417496 FASTKQ14296 549 aaKnown RBP14.58□□□□□ -0.08
HDAC9-208ENST00000417496 FAM83EQ2M2I3 478 aa14.58□□□□□ -0.08
HDAC9-208ENST00000417496 NADK2Q4G0N4 442 aa14.58□□□□□ -0.08
HDAC9-208ENST00000417496 FAM171BQ6P995 826 aa14.58□□□□□ -0.08
HDAC9-208ENST00000417496 KLHDC8BQ8IXV7 354 aa14.58□□□□□ -0.08
HDAC9-208ENST00000417496 OR6P1Q8NGX9 317 aa14.58□□□□□ -0.08
HDAC9-208ENST00000417496 EME1Q96AY2 570 aa14.58□□□□□ -0.08
HDAC9-208ENST00000417496 PABPC5Q96DU9 382 aaKnown RBP14.58□□□□□ -0.08
HDAC9-208ENST00000417496 AP5M1Q9H0R1 490 aa14.58□□□□□ -0.08
HDAC9-208ENST00000417496 NT5MQ9NPB1 228 aa14.58□□□□□ -0.08
HDAC9-208ENST00000417496 OSER1Q9NX31 292 aa14.58□□□□□ -0.08
HDAC9-208ENST00000417496 CACNA2D2Q9NY47 1150 aa14.58□□□□□ -0.08
HDAC9-208ENST00000417496 GIMAP2Q9UG22 337 aa14.58□□□□□ -0.08
HDAC9-208ENST00000417496 HS3ST4Q9Y661 456 aa14.58□□□□□ -0.08
HDAC9-208ENST00000417496 C7orf72A4D263 438 aa14.57□□□□□ -0.08
HDAC9-208ENST00000417496 UNCXA6NJT0 531 aa14.57□□□□□ -0.08
HDAC9-208ENST00000417496 E9PAM4 449 aa14.57□□□□□ -0.08
HDAC9-208ENST00000417496 SLC22A2O15244 555 aa14.57□□□□□ -0.08
HDAC9-208ENST00000417496 AP1G1O43747 822 aa14.57□□□□□ -0.08
HDAC9-208ENST00000417496 GRIK1P39086 918 aa14.57□□□□□ -0.08
HDAC9-208ENST00000417496 CD86P42081 329 aa14.57□□□□□ -0.08
HDAC9-208ENST00000417496 ARSDP51689 593 aa14.57□□□□□ -0.08
HDAC9-208ENST00000417496 HK2P52789 917 aa14.57□□□□□ -0.08
HDAC9-208ENST00000417496 CDKN2DP55273 166 aa14.57□□□□□ -0.08
HDAC9-208ENST00000417496 MRPS6P82932 125 aaKnown RBP14.57□□□□□ -0.08
HDAC9-208ENST00000417496 POU4F1Q01851 419 aa14.57□□□□□ -0.08
HDAC9-208ENST00000417496 SLC10A7Q0GE19 358 aa14.57□□□□□ -0.08
HDAC9-208ENST00000417496 HERC3Q15034 1050 aa14.57□□□□□ -0.08
HDAC9-208ENST00000417496 FSCN1Q16658 493 aaKnown RBP14.57□□□□□ -0.08
HDAC9-208ENST00000417496 GPR158Q5T848 1215 aa14.57□□□□□ -0.08
HDAC9-208ENST00000417496 CXCL17Q6UXB2 119 aa14.57□□□□□ -0.08
HDAC9-208ENST00000417496 CYHR1Q6ZMK1 362 aa14.57□□□□□ -0.08
HDAC9-208ENST00000417496 ANKRD23Q86SG2 305 aa14.57□□□□□ -0.08
HDAC9-208ENST00000417496 AMIGO2Q86SJ2 522 aa14.57□□□□□ -0.08
HDAC9-208ENST00000417496 SCD5Q86SK9 330 aa14.57□□□□□ -0.08
HDAC9-208ENST00000417496 ADCY4Q8NFM4 1077 aa14.57□□□□□ -0.08
HDAC9-208ENST00000417496 LRCH3Q96II8 777 aa14.57□□□□□ -0.08
HDAC9-208ENST00000417496 NOL6Q9H6R4 1146 aaKnown RBP14.57□□□□□ -0.08
HDAC9-208ENST00000417496 MARCH4Q9P2E8 410 aaPredicted RBP14.57□□□□□ -0.08
HDAC9-208ENST00000417496 A0A087X1B8 175 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms