RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 SPAG17Q6Q759 2223 aa23.29■■□□□ 1.32
SMARCB1-205ENST00000417137 A0A1W2PQU0 124 aa23.29■■□□□ 1.32
SMARCB1-205ENST00000417137 UPK3BL1B0FP48 263 aa23.29■■□□□ 1.32
SMARCB1-205ENST00000417137 C10orf142B7Z368 130 aa23.29■■□□□ 1.32
SMARCB1-205ENST00000417137 UPK3BL2E5RIL1 263 aa23.29■■□□□ 1.32
SMARCB1-205ENST00000417137 TRAFD1O14545 582 aaPredicted RBP23.29■■□□□ 1.32
SMARCB1-205ENST00000417137 KCNK3O14649 394 aa23.29■■□□□ 1.32
SMARCB1-205ENST00000417137 BCAT2O15382 392 aaPredicted RBP23.29■■□□□ 1.32
SMARCB1-205ENST00000417137 HTRA2O43464 458 aaPredicted RBP23.29■■□□□ 1.32
SMARCB1-205ENST00000417137 LATO43561 262 aa23.29■■□□□ 1.32
SMARCB1-205ENST00000417137 KIF5CO60282 957 aa23.29■■□□□ 1.32
SMARCB1-205ENST00000417137 GJB3O75712 270 aa23.29■■□□□ 1.32
SMARCB1-205ENST00000417137 ABL2P42684 1182 aa23.29■■□□□ 1.32
SMARCB1-205ENST00000417137 EIF3EP60228 445 aaKnown RBP23.29■■□□□ 1.32
SMARCB1-205ENST00000417137 ZBTB17Q13105 803 aa23.29■■□□□ 1.32
SMARCB1-205ENST00000417137 CCDC6Q16204 474 aa23.29■■□□□ 1.32
SMARCB1-205ENST00000417137 SETMARQ53H47 684 aaPredicted RBP23.29■■□□□ 1.32
SMARCB1-205ENST00000417137 B4GALNT4Q76KP1 1039 aa23.29■■□□□ 1.32
SMARCB1-205ENST00000417137 ERMP1Q7Z2K6 904 aa23.29■■□□□ 1.32
SMARCB1-205ENST00000417137 CDKL3Q8IVW4 592 aaPredicted RBP23.29■■□□□ 1.32
SMARCB1-205ENST00000417137 PDCD6IPQ8WUM4 868 aaKnown RBP23.29■■□□□ 1.32
SMARCB1-205ENST00000417137 HTR3CQ8WXA8 447 aa23.29■■□□□ 1.32
SMARCB1-205ENST00000417137 AGAP3Q96P47 875 aa23.29■■□□□ 1.32
SMARCB1-205ENST00000417137 QKIQ96PU8 341 aaKnown RBP eCLIP23.29■■□□□ 1.32
SMARCB1-205ENST00000417137 SLC6A14Q9UN76 642 aa23.29■■□□□ 1.32
SMARCB1-205ENST00000417137 DMTF1Q9Y222 760 aa23.29■■□□□ 1.32
SMARCB1-205ENST00000417137 FAM186AA6NE01 2351 aa23.28■■□□□ 1.32
SMARCB1-205ENST00000417137 AREL1O15033 823 aa23.28■■□□□ 1.32
SMARCB1-205ENST00000417137 CFIP05156 583 aa23.28■■□□□ 1.32
SMARCB1-205ENST00000417137 PPP2CBP62714 309 aa23.28■■□□□ 1.32
SMARCB1-205ENST00000417137 PPP2CAP67775 309 aa23.28■■□□□ 1.32
SMARCB1-205ENST00000417137 DSC2Q02487 901 aa23.28■■□□□ 1.32
SMARCB1-205ENST00000417137 TRIM61Q5EBN2 209 aa23.28■■□□□ 1.32
SMARCB1-205ENST00000417137 ARMC12Q5T9G4 340 aa23.28■■□□□ 1.32
SMARCB1-205ENST00000417137 SLC23A3Q6PIS1 610 aa23.28■■□□□ 1.32
SMARCB1-205ENST00000417137 NDUFAF2Q8N183 169 aa23.28■■□□□ 1.32
SMARCB1-205ENST00000417137 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.28■■□□□ 1.32
SMARCB1-205ENST00000417137 CNTD1Q8N815 330 aa23.28■■□□□ 1.32
SMARCB1-205ENST00000417137 SPOCK2Q92563 424 aa23.28■■□□□ 1.32
SMARCB1-205ENST00000417137 TLR10Q9BXR5 811 aa23.28■■□□□ 1.32
SMARCB1-205ENST00000417137 PARD6AQ9NPB6 346 aa23.28■■□□□ 1.32
SMARCB1-205ENST00000417137 RAI2Q9Y5P3 530 aa23.28■■□□□ 1.32
SMARCB1-205ENST00000417137 GPR179Q6PRD1 2367 aa23.27■■□□□ 1.32
SMARCB1-205ENST00000417137 SDK1Q7Z5N4 2213 aa23.27■■□□□ 1.32
SMARCB1-205ENST00000417137 RBP3P10745 1247 aa23.27■■□□□ 1.32
SMARCB1-205ENST00000417137 TGM1P22735 817 aa23.27■■□□□ 1.32
SMARCB1-205ENST00000417137 PTPN3P26045 913 aa23.27■■□□□ 1.32
SMARCB1-205ENST00000417137 MAT2AP31153 395 aaKnown RBP23.27■■□□□ 1.32
SMARCB1-205ENST00000417137 AFF3P51826 1226 aaKnown RBP23.27■■□□□ 1.32
SMARCB1-205ENST00000417137 RACK1P63244 317 aaKnown RBP23.27■■□□□ 1.32
SMARCB1-205ENST00000417137 SGCGQ13326 291 aa23.27■■□□□ 1.32
SMARCB1-205ENST00000417137 KLF1Q13351 362 aaPredicted RBP23.27■■□□□ 1.32
SMARCB1-205ENST00000417137 TEAD4Q15561 434 aa23.27■■□□□ 1.32
SMARCB1-205ENST00000417137 ZNF569Q5MCW4 686 aa23.27■■□□□ 1.32
SMARCB1-205ENST00000417137 DARS2Q6PI48 645 aaKnown RBP23.27■■□□□ 1.32
SMARCB1-205ENST00000417137 PRR23CQ6ZRP0 262 aa23.27■■□□□ 1.32
SMARCB1-205ENST00000417137 ZCCHC9Q8N567 271 aaKnown RBP23.27■■□□□ 1.32
SMARCB1-205ENST00000417137 ARRDC2Q8TBH0 407 aa23.27■■□□□ 1.32
SMARCB1-205ENST00000417137 CXorf40AQ8TE69 158 aa23.27■■□□□ 1.32
SMARCB1-205ENST00000417137 SKA1Q96BD8 255 aa23.27■■□□□ 1.32
SMARCB1-205ENST00000417137 TEKT5Q96M29 485 aa23.27■■□□□ 1.32
SMARCB1-205ENST00000417137 NSMCE3Q96MG7 304 aa23.27■■□□□ 1.32
SMARCB1-205ENST00000417137 PCDH12Q9NPG4 1184 aa23.27■■□□□ 1.32
SMARCB1-205ENST00000417137 TRHDEQ9UKU6 1024 aa23.27■■□□□ 1.32
SMARCB1-205ENST00000417137 PHTF1Q9UMS5 762 aa23.27■■□□□ 1.32
SMARCB1-205ENST00000417137 PCDHB9Q9Y5E1 797 aa23.27■■□□□ 1.32
SMARCB1-205ENST00000417137 RIOK3O14730 519 aaKnown RBP23.26■■□□□ 1.31
SMARCB1-205ENST00000417137 STK10O94804 968 aaKnown RBP23.26■■□□□ 1.31
SMARCB1-205ENST00000417137 CPP00450 1065 aa23.26■■□□□ 1.31
SMARCB1-205ENST00000417137 NIPAL4Q0D2K0 466 aa23.26■■□□□ 1.31
SMARCB1-205ENST00000417137 ZNF284Q2VY69 593 aa23.26■■□□□ 1.31
SMARCB1-205ENST00000417137 TMEM52BQ4KMG9 183 aa23.26■■□□□ 1.31
SMARCB1-205ENST00000417137 PID1Q7Z2X4 250 aa23.26■■□□□ 1.31
SMARCB1-205ENST00000417137 C1orf216Q8TAB5 229 aa23.26■■□□□ 1.31
SMARCB1-205ENST00000417137 SERAC1Q96JX3 654 aa23.26■■□□□ 1.31
SMARCB1-205ENST00000417137 CEP41Q9BYV8 373 aa23.26■■□□□ 1.31
SMARCB1-205ENST00000417137 FRMD8P1Q9BZ68 369 aaPredicted RBP23.26■■□□□ 1.31
SMARCB1-205ENST00000417137 SLC25A51Q9H1U9 297 aa23.26■■□□□ 1.31
SMARCB1-205ENST00000417137 SMOC1Q9H4F8 434 aa23.26■■□□□ 1.31
SMARCB1-205ENST00000417137 GLOD4Q9HC38 313 aa23.26■■□□□ 1.31
SMARCB1-205ENST00000417137 KLHL8Q9P2G9 620 aaPredicted RBP23.26■■□□□ 1.31
SMARCB1-205ENST00000417137 PRAMEF26H0Y7S4 382 aa23.25■■□□□ 1.31
SMARCB1-205ENST00000417137 PGLSO95336 258 aa23.25■■□□□ 1.31
SMARCB1-205ENST00000417137 SYPP08247 313 aa23.25■■□□□ 1.31
SMARCB1-205ENST00000417137 RBL1P28749 1068 aa23.25■■□□□ 1.31
SMARCB1-205ENST00000417137 FAM193AP78312 1265 aa23.25■■□□□ 1.31
SMARCB1-205ENST00000417137 WASHC5Q12768 1159 aa23.25■■□□□ 1.31
SMARCB1-205ENST00000417137 TRAF2Q12933 501 aa23.25■■□□□ 1.31
SMARCB1-205ENST00000417137 TMEM259Q4ZIN3 620 aa23.25■■□□□ 1.31
SMARCB1-205ENST00000417137 LRRC73Q5JTD7 316 aa23.25■■□□□ 1.31
SMARCB1-205ENST00000417137 NAPEPLDQ6IQ20 393 aa23.25■■□□□ 1.31
SMARCB1-205ENST00000417137 SLC13A5Q86YT5 568 aaPredicted RBP23.25■■□□□ 1.31
SMARCB1-205ENST00000417137 KIAA2013Q8IYS2 634 aa23.25■■□□□ 1.31
SMARCB1-205ENST00000417137 MAIP1Q8WWC4 291 aa23.25■■□□□ 1.31
SMARCB1-205ENST00000417137 ORAI3Q9BRQ5 295 aa23.25■■□□□ 1.31
SMARCB1-205ENST00000417137 SLC17A9Q9BYT1 436 aa23.25■■□□□ 1.31
SMARCB1-205ENST00000417137 EBF2Q9HAK2 575 aa23.25■■□□□ 1.31
SMARCB1-205ENST00000417137 TM9SF3Q9HD45 589 aa23.25■■□□□ 1.31
SMARCB1-205ENST00000417137 AASDHPPTQ9NRN7 309 aa23.25■■□□□ 1.31
SMARCB1-205ENST00000417137 ZFR2Q9UPR6 939 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms