RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 CRABP2P29373 138 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 CXCR3P49682 368 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 PSEN1P49768 467 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 RENBPP51606 427 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 CSNK2BP67870 215 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 SLC9B1Q4ZJI4 515 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 TMEM192Q8IY95 271 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 ZNF276Q8N554 614 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 RP9Q8TA86 221 aaKnown RBP12.99□□□□□ -0.33
SCN1B-202ENST00000415950 DNAJB3Q8WWF6 145 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 NARS2Q96I59 477 aaKnown RBP12.99□□□□□ -0.33
SCN1B-202ENST00000415950 OR52B2Q96RD2 323 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 ADGRE3Q9BY15 652 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 GPR88Q9GZN0 384 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 SPATC1LQ9H0A9 340 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 EPB41L1Q9H4G0 881 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 EHD3Q9NZN3 535 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 NCAM2O15394 837 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 TMEM132BQ14DG7 1078 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 PRKD1Q15139 912 aaPredicted RBP12.99□□□□□ -0.33
SCN1B-202ENST00000415950 RGS21Q2M5E4 152 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 OTOP3Q7RTS5 596 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 PTGR2Q8N8N7 351 aaPredicted RBP12.99□□□□□ -0.33
SCN1B-202ENST00000415950 NAT8LQ8N9F0 302 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 SPATA22Q8NHS9 363 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 LMO3Q8TAP4 145 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 SLC35B2Q8TB61 432 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 CSPG4P5Q96PW8 444 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 APOL4Q9BPW4 351 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 MRPL45Q9BRJ2 306 aaKnown RBP12.99□□□□□ -0.33
SCN1B-202ENST00000415950 IPPQ9Y573 584 aa12.99□□□□□ -0.33
SCN1B-202ENST00000415950 MRC1P22897 1456 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 IGKV6D-41A0A0C4DH26 115 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 FAM220BPB1ANY3 271 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 TRIM38O00635 465 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 ABLIM1O14639 778 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 FFAR3O14843 346 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 BIRC5O15392 142 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 GPR42O15529 346 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 TGDSO95455 350 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 MYL4P12829 197 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 BDNFP23560 247 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 THOP1P52888 689 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 PRKCQQ04759 706 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 LPIN1Q14693 890 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 WSCD1Q658N2 575 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 SLC9A4Q6AI14 798 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 CBR4Q8N4T8 237 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 ST13P5Q8NFI4 369 aaPredicted RBP12.98□□□□□ -0.33
SCN1B-202ENST00000415950 CLEC4CQ8WTT0 213 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 APBB2Q92870 758 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 HSPBAP1Q96EW2 488 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 ZFP14Q9HCL3 533 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 KLQ9UEF7 1012 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 ZNF180Q9UJW8 692 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 TOR1BO14657 336 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 NPM3O75607 178 aaKnown RBP12.98□□□□□ -0.33
SCN1B-202ENST00000415950 FGFR1P11362 822 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 S100A3P33764 101 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 KRT20P35900 424 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 SLC5A3P53794 718 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 GRM3Q14832 879 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 TIGD2Q4W5G0 525 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 PLEKHG4Q58EX7 1191 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 CACUL1Q86Y37 369 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 C8orf59Q8N0T1 100 aaPredicted RBP12.98□□□□□ -0.33
SCN1B-202ENST00000415950 C1orf127Q8N9H9 656 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 C18orf25Q96B23 403 aaPredicted RBP12.98□□□□□ -0.33
SCN1B-202ENST00000415950 UGT2B28Q9BY64 529 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 COQ10BQ9H8M1 238 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 SPAG4Q9NPE6 437 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 FBXO5Q9UKT4 447 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 SNX10Q9Y5X0 201 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 PDLIM1O00151 329 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 MFSD11O43934 449 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 SEC24AO95486 1093 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 YAP1P46937 504 aaKnown RBP12.98□□□□□ -0.33
SCN1B-202ENST00000415950 ARL4DP49703 201 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 FSTL4Q6MZW2 842 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 CENPIQ92674 756 aaPredicted RBP12.98□□□□□ -0.33
SCN1B-202ENST00000415950 ESAMQ96AP7 390 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 ASB7Q9H672 318 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 TBC1D13Q9NVG8 400 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 TRNAU1APQ9NX07 287 aaKnown RBP12.98□□□□□ -0.33
SCN1B-202ENST00000415950 ARHGAP28Q9P2N2 729 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 DHRS12A0PJE2 317 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 SLC15A5A6NIM6 579 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 CCR10P46092 362 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 ALDH7A1P49419 539 aaKnown RBP12.98□□□□□ -0.33
SCN1B-202ENST00000415950 ZNF484Q5JVG2 852 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 CASP12Q6UXS9 341 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 GCNT7Q6ZNI0 430 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 RPS27LQ71UM5 84 aaKnown RBP12.98□□□□□ -0.33
SCN1B-202ENST00000415950 TRIM74Q86UV6 250 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 TRIM73Q86UV7 250 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 SVOPQ8N4V2 548 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 KLHL20Q9Y2M5 609 aa12.98□□□□□ -0.33
SCN1B-202ENST00000415950 AFDNP55196 1824 aaKnown RBP12.97□□□□□ -0.33
SCN1B-202ENST00000415950 ZNF541Q9H0D2 1346 aa12.97□□□□□ -0.33
SCN1B-202ENST00000415950 TMEM233B4DJY2 109 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms