RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 SYT13Q7L8C5 426 aa14.69□□□□□ -0.06
SGCE-202ENST00000415788 PRELID2Q8N945 189 aa14.69□□□□□ -0.06
SGCE-202ENST00000415788 C12orf50Q8NA57 414 aaPredicted RBP14.69□□□□□ -0.06
SGCE-202ENST00000415788 TXNDC5Q8NBS9 432 aaKnown RBP14.69□□□□□ -0.06
SGCE-202ENST00000415788 C1orf54Q8WWF1 131 aa14.69□□□□□ -0.06
SGCE-202ENST00000415788 ATG4AQ8WYN0 398 aa14.69□□□□□ -0.06
SGCE-202ENST00000415788 FAM118BQ9BPY3 351 aa14.69□□□□□ -0.06
SGCE-202ENST00000415788 FBRSQ9HAH7 460 aa14.69□□□□□ -0.06
SGCE-202ENST00000415788 FCF1Q9Y324 198 aaKnown RBP14.69□□□□□ -0.06
SGCE-202ENST00000415788 FARP1Q9Y4F1 1045 aaPredicted RBP14.69□□□□□ -0.06
SGCE-202ENST00000415788 ACTL7AQ9Y615 435 aa14.69□□□□□ -0.06
SGCE-202ENST00000415788 MIA3Q5JRA6 1907 aa14.69□□□□□ -0.06
SGCE-202ENST00000415788 TTC34A8MYJ7 566 aa14.68□□□□□ -0.06
SGCE-202ENST00000415788 SMAD6O43541 496 aaKnown RBP14.68□□□□□ -0.06
SGCE-202ENST00000415788 SYNCRIPO60506 623 aaKnown RBP14.68□□□□□ -0.06
SGCE-202ENST00000415788 UBOX5O94941 541 aa14.68□□□□□ -0.06
SGCE-202ENST00000415788 GSRP00390 522 aa14.68□□□□□ -0.06
SGCE-202ENST00000415788 PDGFBP01127 241 aaPredicted RBP14.68□□□□□ -0.06
SGCE-202ENST00000415788 ITGAVP06756 1048 aa14.68□□□□□ -0.06
SGCE-202ENST00000415788 EPHX1P07099 455 aa14.68□□□□□ -0.06
SGCE-202ENST00000415788 VAV1P15498 845 aa14.68□□□□□ -0.06
SGCE-202ENST00000415788 PRKCHP24723 683 aa14.68□□□□□ -0.06
SGCE-202ENST00000415788 CCNG1P51959 295 aa14.68□□□□□ -0.06
SGCE-202ENST00000415788 SNRPD1P62314 119 aaKnown RBP14.68□□□□□ -0.06
SGCE-202ENST00000415788 NSUN2Q08J23 767 aaKnown RBP eCLIP14.68□□□□□ -0.06
SGCE-202ENST00000415788 OASLQ15646 514 aaKnown RBP14.68□□□□□ -0.06
SGCE-202ENST00000415788 MAMSTRQ6ZN01 415 aa14.68□□□□□ -0.06
SGCE-202ENST00000415788 SPEM1Q8N4L4 309 aa14.68□□□□□ -0.06
SGCE-202ENST00000415788 OR2AP1Q8NGE2 309 aa14.68□□□□□ -0.06
SGCE-202ENST00000415788 AGAP11Q8TF27 550 aa14.68□□□□□ -0.06
SGCE-202ENST00000415788 PBXIP1Q96AQ6 731 aa14.68□□□□□ -0.06
SGCE-202ENST00000415788 IL12RB2Q99665 862 aa14.68□□□□□ -0.06
SGCE-202ENST00000415788 ABCF3Q9NUQ8 709 aa14.68□□□□□ -0.06
SGCE-202ENST00000415788 RBM22Q9NW64 420 aaKnown RBP eCLIP14.68□□□□□ -0.06
SGCE-202ENST00000415788 TRHDEQ9UKU6 1024 aa14.68□□□□□ -0.06
SGCE-202ENST00000415788 DRG1Q9Y295 367 aaKnown RBP14.68□□□□□ -0.06
SGCE-202ENST00000415788 SGK1O00141 431 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 ADAM23O75077 832 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 IGSF6O95976 241 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 HOXB2P14652 356 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 RBL1P28749 1068 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 MAPK8P45983 427 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 CSNK1DP48730 415 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 CAMK2GQ13555 558 aaPredicted RBP14.67□□□□□ -0.06
SGCE-202ENST00000415788 ELAVL3Q14576 367 aaKnown RBP14.67□□□□□ -0.06
SGCE-202ENST00000415788 TEX44Q53QW1 395 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 RALGPS1Q5JS13 557 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 DYDC1Q8WWB3 177 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 PTPRN2Q92932 1015 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 SERPINB12Q96P63 405 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 MGME1Q9BQP7 344 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 SEMA4AQ9H3S1 761 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 ZDHHC4Q9NPG8 344 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 SEPT10Q9P0V9 454 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 ZNF148Q9UQR1 794 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 ARL2BPQ9Y2Y0 163 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 ANTXRLA6NF34 631 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 WASH3PC4AMC7 463 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 ALOX15BO15296 676 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 KCNN4O15554 427 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 ZNF821O75541 412 aaPredicted RBP14.67□□□□□ -0.06
SGCE-202ENST00000415788 JCHAINP01591 159 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 DCNP07585 359 aaKnown RBP14.67□□□□□ -0.06
SGCE-202ENST00000415788 HLA-EP13747 358 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 CES1P23141 567 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 PTPN3P26045 913 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 RPL21P46778 160 aaKnown RBP14.67□□□□□ -0.06
SGCE-202ENST00000415788 DGKEP52429 567 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 ZBTB17Q13105 803 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 CRY1Q16526 586 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 CARD16Q5EG05 197 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 C9orf64Q5T6V5 341 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 Q6ZVU0 165 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 LRRN4Q8WUT4 740 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 ART4Q93070 314 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 KLHL29Q96CT2 875 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 TMEM121Q9BTD3 319 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 POLR1EQ9GZS1 481 aaKnown RBP14.67□□□□□ -0.06
SGCE-202ENST00000415788 USP29Q9HBJ7 922 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 DLGAP2Q9P1A6 1054 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 LHX3Q9UBR4 397 aa14.67□□□□□ -0.06
SGCE-202ENST00000415788 NUP205Q92621 2012 aa14.66□□□□□ -0.06
SGCE-202ENST00000415788 MUC22E2RYF6 1773 aaPredicted RBP14.66□□□□□ -0.06
SGCE-202ENST00000415788 NYNRINQ9P2P1 1898 aaKnown RBP14.66□□□□□ -0.06
SGCE-202ENST00000415788 RNF103O00237 685 aa14.66□□□□□ -0.06
SGCE-202ENST00000415788 WASP42768 502 aa14.66□□□□□ -0.06
SGCE-202ENST00000415788 RAD51Q06609 339 aa14.66□□□□□ -0.06
SGCE-202ENST00000415788 CCDC15Q0P6D6 951 aa14.66□□□□□ -0.06
SGCE-202ENST00000415788 WASHC5Q12768 1159 aa14.66□□□□□ -0.06
SGCE-202ENST00000415788 SNX1Q13596 522 aa14.66□□□□□ -0.06
SGCE-202ENST00000415788 GAS6Q14393 721 aa14.66□□□□□ -0.06
SGCE-202ENST00000415788 GRM3Q14832 879 aa14.66□□□□□ -0.06
SGCE-202ENST00000415788 ALG1LQ6GMV1 187 aa14.66□□□□□ -0.06
SGCE-202ENST00000415788 DSG4Q86SJ6 1040 aa14.66□□□□□ -0.06
SGCE-202ENST00000415788 FBXL6Q8N531 539 aa14.66□□□□□ -0.06
SGCE-202ENST00000415788 ZNF366Q8N895 744 aa14.66□□□□□ -0.06
SGCE-202ENST00000415788 OR2A12Q8NGT7 310 aa14.66□□□□□ -0.06
SGCE-202ENST00000415788 ATL2Q8NHH9 583 aa14.66□□□□□ -0.06
SGCE-202ENST00000415788 OR8D1Q8WZ84 308 aa14.66□□□□□ -0.06
SGCE-202ENST00000415788 GRAMD1AQ96CP6 724 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms