RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 C6P13671 934 aa19.53■□□□□ 0.72
UBXN4-202ENST00000415164 MMP8P22894 467 aa19.53■□□□□ 0.72
UBXN4-202ENST00000415164 HTR1BP28222 390 aa19.53■□□□□ 0.72
UBXN4-202ENST00000415164 BLKP51451 505 aa19.53■□□□□ 0.72
UBXN4-202ENST00000415164 PDX1P52945 283 aa19.53■□□□□ 0.72
UBXN4-202ENST00000415164 HDAC4P56524 1084 aa19.53■□□□□ 0.72
UBXN4-202ENST00000415164 POLR2FP61218 127 aaKnown RBP19.53■□□□□ 0.72
UBXN4-202ENST00000415164 FMO1Q01740 532 aa19.53■□□□□ 0.72
UBXN4-202ENST00000415164 CDR2Q01850 454 aa19.53■□□□□ 0.72
UBXN4-202ENST00000415164 CLN3Q13286 438 aa19.53■□□□□ 0.72
UBXN4-202ENST00000415164 LRRC14Q15048 493 aa19.53■□□□□ 0.72
UBXN4-202ENST00000415164 INO80CQ6PI98 192 aaPredicted RBP19.53■□□□□ 0.72
UBXN4-202ENST00000415164 STRADAQ7RTN6 431 aa19.53■□□□□ 0.72
UBXN4-202ENST00000415164 SLFN11Q7Z7L1 901 aa19.53■□□□□ 0.72
UBXN4-202ENST00000415164 B3GNT8Q7Z7M8 397 aa19.53■□□□□ 0.72
UBXN4-202ENST00000415164 FSTL5Q8N475 847 aaPredicted RBP19.53■□□□□ 0.72
UBXN4-202ENST00000415164 FBXO39Q8N4B4 442 aa19.53■□□□□ 0.72
UBXN4-202ENST00000415164 PAF1Q8N7H5 531 aa19.53■□□□□ 0.72
UBXN4-202ENST00000415164 HMCESQ96FZ2 354 aa19.53■□□□□ 0.72
UBXN4-202ENST00000415164 CPEB1Q9BZB8 566 aaKnown RBP19.53■□□□□ 0.72
UBXN4-202ENST00000415164 FOXP3Q9BZS1 431 aa19.53■□□□□ 0.72
UBXN4-202ENST00000415164 KLC2Q9H0B6 622 aa19.53■□□□□ 0.72
UBXN4-202ENST00000415164 FAM207AQ9NSI2 230 aaPredicted RBP19.53■□□□□ 0.72
UBXN4-202ENST00000415164 NOCTQ9UK39 431 aaKnown RBP19.53■□□□□ 0.72
UBXN4-202ENST00000415164 NEU3Q9UQ49 428 aa19.53■□□□□ 0.72
UBXN4-202ENST00000415164 GTF3C3Q9Y5Q9 886 aa19.53■□□□□ 0.72
UBXN4-202ENST00000415164 DOCK4Q8N1I0 1966 aa19.53■□□□□ 0.72
UBXN4-202ENST00000415164 FLNBO75369 2602 aaKnown RBP19.52■□□□□ 0.72
UBXN4-202ENST00000415164 CXorf51AA0A1B0GTR3 108 aa19.52■□□□□ 0.72
UBXN4-202ENST00000415164 CDRT15L2A8MXV6 281 aa19.52■□□□□ 0.72
UBXN4-202ENST00000415164 PLD2O14939 933 aa19.52■□□□□ 0.72
UBXN4-202ENST00000415164 CYP1A1P04798 512 aaPredicted RBP19.52■□□□□ 0.72
UBXN4-202ENST00000415164 RPLP0P05388 317 aaKnown RBP19.52■□□□□ 0.72
UBXN4-202ENST00000415164 GPD1P21695 349 aa19.52■□□□□ 0.72
UBXN4-202ENST00000415164 PTPN9P43378 593 aa19.52■□□□□ 0.72
UBXN4-202ENST00000415164 NSFP46459 744 aaKnown RBP19.52■□□□□ 0.72
UBXN4-202ENST00000415164 HK3P52790 923 aa19.52■□□□□ 0.72
UBXN4-202ENST00000415164 CCL7P80098 99 aa19.52■□□□□ 0.72
UBXN4-202ENST00000415164 ELP6Q0PNE2 266 aa19.52■□□□□ 0.72
UBXN4-202ENST00000415164 ALG11Q2TAA5 492 aa19.52■□□□□ 0.72
UBXN4-202ENST00000415164 TCP11X2Q5H9J9 407 aa19.52■□□□□ 0.72
UBXN4-202ENST00000415164 EFHC2Q5JST6 749 aa19.52■□□□□ 0.72
UBXN4-202ENST00000415164 GKN2Q86XP6 184 aa19.52■□□□□ 0.72
UBXN4-202ENST00000415164 Q8N9G6 341 aaPredicted RBP19.52■□□□□ 0.72
UBXN4-202ENST00000415164 EDEM3Q9BZQ6 932 aa19.52■□□□□ 0.72
UBXN4-202ENST00000415164 STRADBQ9C0K7 418 aa19.52■□□□□ 0.72
UBXN4-202ENST00000415164 VPS16Q9H269 839 aa19.52■□□□□ 0.72
UBXN4-202ENST00000415164 CLSTN2Q9H4D0 955 aa19.52■□□□□ 0.72
UBXN4-202ENST00000415164 RETREG1Q9H6L5 497 aa19.52■□□□□ 0.72
UBXN4-202ENST00000415164 ADAM22Q9P0K1 906 aa19.52■□□□□ 0.72
UBXN4-202ENST00000415164 KLQ9UEF7 1012 aa19.52■□□□□ 0.72
UBXN4-202ENST00000415164 RABGEF1Q9UJ41 708 aa19.52■□□□□ 0.72
UBXN4-202ENST00000415164 OR1A2Q9Y585 309 aa19.52■□□□□ 0.72
UBXN4-202ENST00000415164 CFAP46Q8IYW2 2715 aa19.52■□□□□ 0.71
UBXN4-202ENST00000415164 B8ZZF3 427 aa19.51■□□□□ 0.71
UBXN4-202ENST00000415164 RASA4BC9J798 803 aa19.51■□□□□ 0.71
UBXN4-202ENST00000415164 RASA4O43374 803 aa19.51■□□□□ 0.71
UBXN4-202ENST00000415164 SLC28A2O43868 658 aa19.51■□□□□ 0.71
UBXN4-202ENST00000415164 RASGRP1O95267 797 aa19.51■□□□□ 0.71
UBXN4-202ENST00000415164 PRKCGP05129 697 aa19.51■□□□□ 0.71
UBXN4-202ENST00000415164 ITGA2BP08514 1039 aa19.51■□□□□ 0.71
UBXN4-202ENST00000415164 HGFP14210 728 aa19.51■□□□□ 0.71
UBXN4-202ENST00000415164 CHRNB2P17787 502 aa19.51■□□□□ 0.71
UBXN4-202ENST00000415164 ERCC5P28715 1186 aaPredicted RBP19.51■□□□□ 0.71
UBXN4-202ENST00000415164 ERAP2Q6P179 960 aa19.51■□□□□ 0.71
UBXN4-202ENST00000415164 NYAP1Q6ZVC0 841 aa19.51■□□□□ 0.71
UBXN4-202ENST00000415164 RAB11FIP2Q7L804 512 aa19.51■□□□□ 0.71
UBXN4-202ENST00000415164 RTL3Q8N8U3 475 aaKnown RBP19.51■□□□□ 0.71
UBXN4-202ENST00000415164 VOPP1Q96AW1 172 aa19.51■□□□□ 0.71
UBXN4-202ENST00000415164 TBATAQ96M53 351 aa19.51■□□□□ 0.71
UBXN4-202ENST00000415164 PCMTD1Q96MG8 357 aaPredicted RBP19.51■□□□□ 0.71
UBXN4-202ENST00000415164 CCNL2Q96S94 520 aaPredicted RBP19.51■□□□□ 0.71
UBXN4-202ENST00000415164 GANQ9H2C0 597 aa19.51■□□□□ 0.71
UBXN4-202ENST00000415164 DAAM1Q9Y4D1 1078 aa19.51■□□□□ 0.71
UBXN4-202ENST00000415164 TOR1BO14657 336 aa19.5■□□□□ 0.71
UBXN4-202ENST00000415164 TPM2P07951 284 aa19.5■□□□□ 0.71
UBXN4-202ENST00000415164 JMJD7P0C870 316 aa19.5■□□□□ 0.71
UBXN4-202ENST00000415164 SLC5A2P31639 672 aa19.5■□□□□ 0.71
UBXN4-202ENST00000415164 RFC1P35251 1148 aaPredicted RBP19.5■□□□□ 0.71
UBXN4-202ENST00000415164 UGT1A5P35504 534 aa19.5■□□□□ 0.71
UBXN4-202ENST00000415164 SOX5P35711 763 aa19.5■□□□□ 0.71
UBXN4-202ENST00000415164 INHBCP55103 352 aa19.5■□□□□ 0.71
UBXN4-202ENST00000415164 SRP54P61011 504 aaKnown RBP19.5■□□□□ 0.71
UBXN4-202ENST00000415164 INPP5AQ14642 412 aa19.5■□□□□ 0.71
UBXN4-202ENST00000415164 NFATC4Q14934 902 aa19.5■□□□□ 0.71
UBXN4-202ENST00000415164 SYCP1Q15431 976 aa19.5■□□□□ 0.71
UBXN4-202ENST00000415164 WSCD2Q2TBF2 565 aa19.5■□□□□ 0.71
UBXN4-202ENST00000415164 TMEM52BQ4KMG9 183 aa19.5■□□□□ 0.71
UBXN4-202ENST00000415164 PRICKLE2Q7Z3G6 844 aa19.5■□□□□ 0.71
UBXN4-202ENST00000415164 CLEC14AQ86T13 490 aa19.5■□□□□ 0.71
UBXN4-202ENST00000415164 CASKIN2Q8WXE0 1202 aa19.5■□□□□ 0.71
UBXN4-202ENST00000415164 COL26A1Q96A83 441 aa19.5■□□□□ 0.71
UBXN4-202ENST00000415164 NTAN1Q96AB6 310 aa19.5■□□□□ 0.71
UBXN4-202ENST00000415164 MED8Q96G25 268 aa19.5■□□□□ 0.71
UBXN4-202ENST00000415164 APOOQ9BUR5 198 aa19.5■□□□□ 0.71
UBXN4-202ENST00000415164 NOL6Q9H6R4 1146 aaKnown RBP19.5■□□□□ 0.71
UBXN4-202ENST00000415164 PCDH12Q9NPG4 1184 aa19.5■□□□□ 0.71
UBXN4-202ENST00000415164 DKK3Q9UBP4 350 aa19.5■□□□□ 0.71
UBXN4-202ENST00000415164 UBA2Q9UBT2 640 aaPredicted RBP19.5■□□□□ 0.71
UBXN4-202ENST00000415164 PISDQ9UG56 409 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms