RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 DTNBP1Q96EV8 351 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 NPC1L1Q9UHC9 1359 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 QSOX1O00391 747 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 VIPP01282 170 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 CD52P31358 61 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 SLC12A3P55017 1021 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 PABPC1LQ4VXU2 614 aaKnown RBP18.59■□□□□ 0.57
SHANK3-202ENST00000414786 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.59■□□□□ 0.57
SHANK3-202ENST00000414786 NUP50Q9UKX7 468 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 DMTF1Q9Y222 760 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 RPH3AQ9Y2J0 694 aaPredicted RBP18.59■□□□□ 0.57
SHANK3-202ENST00000414786 NOX1Q9Y5S8 564 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 ENPP3O14638 875 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 ZSCAN5DPP0CG00 497 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 CDH3P22223 829 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 UGT1A5P35504 534 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 TMPRSS11BQ86T26 416 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 STOML2Q9UJZ1 356 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 CNTNAP5Q8WYK1 1306 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 FOXP2O15409 715 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 SLC31A1O15431 190 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 EPHX1P07099 455 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 RAB25P57735 213 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 ALG1LQ6GMV1 187 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 AMIGO1Q86WK6 493 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 PHYKPLQ8IUZ5 450 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 CD302Q8IX05 232 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 SETD7Q8WTS6 366 aaKnown RBP18.59■□□□□ 0.57
SHANK3-202ENST00000414786 LDAHQ9H6V9 325 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 ATP13A3Q9H7F0 1226 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 BRD7Q9NPI1 651 aa18.59■□□□□ 0.57
SHANK3-202ENST00000414786 CCDC162PA2VCL2 907 aa18.58■□□□□ 0.57
SHANK3-202ENST00000414786 C9P02748 559 aa18.58■□□□□ 0.57
SHANK3-202ENST00000414786 FCER2P06734 321 aa18.58■□□□□ 0.57
SHANK3-202ENST00000414786 MYBPC3Q14896 1274 aa18.58■□□□□ 0.57
SHANK3-202ENST00000414786 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.58■□□□□ 0.575e-7■■■■□ 19.5
SHANK3-202ENST00000414786 ARHGEF19Q8IW93 802 aa18.58■□□□□ 0.57
SHANK3-202ENST00000414786 ACTL9Q8TC94 416 aa18.58■□□□□ 0.57
SHANK3-202ENST00000414786 TPRKBQ9Y3C4 175 aa18.58■□□□□ 0.57
SHANK3-202ENST00000414786 BANF1O75531 89 aa18.58■□□□□ 0.57
SHANK3-202ENST00000414786 SLC27A1Q6PCB7 646 aa18.58■□□□□ 0.57
SHANK3-202ENST00000414786 GSDMCQ9BYG8 508 aa18.58■□□□□ 0.57
SHANK3-202ENST00000414786 PLGRKTQ9HBL7 147 aa18.58■□□□□ 0.57
SHANK3-202ENST00000414786 EFCAB6Q5THR3 1501 aa18.58■□□□□ 0.57
SHANK3-202ENST00000414786 H3BNH8 94 aa18.58■□□□□ 0.57
SHANK3-202ENST00000414786 HCN1O60741 890 aa18.58■□□□□ 0.57
SHANK3-202ENST00000414786 DHPSP49366 369 aaPredicted RBP18.58■□□□□ 0.57
SHANK3-202ENST00000414786 ITGA1P56199 1179 aa18.58■□□□□ 0.57
SHANK3-202ENST00000414786 MAPK7Q13164 816 aa18.58■□□□□ 0.57
SHANK3-202ENST00000414786 FBXO48Q5FWF7 155 aa18.58■□□□□ 0.57
SHANK3-202ENST00000414786 REPS2Q8NFH8 660 aa18.58■□□□□ 0.57
SHANK3-202ENST00000414786 SERPINA1P01009 418 aa18.58■□□□□ 0.56
SHANK3-202ENST00000414786 GJB1P08034 283 aa18.58■□□□□ 0.56
SHANK3-202ENST00000414786 SLC26A11Q86WA9 606 aa18.58■□□□□ 0.56
SHANK3-202ENST00000414786 CCDC163A0A0D9SF12 145 aa18.58■□□□□ 0.56
SHANK3-202ENST00000414786 FAM58BPP0C7Q3 252 aa18.58■□□□□ 0.56
SHANK3-202ENST00000414786 BTN3A2P78410 334 aa18.58■□□□□ 0.56
SHANK3-202ENST00000414786 GRSF1Q12849 480 aaKnown RBP eCLIP18.58■□□□□ 0.56
SHANK3-202ENST00000414786 OR52K2Q8NGK3 314 aa18.58■□□□□ 0.56
SHANK3-202ENST00000414786 CYP2W1Q8TAV3 490 aa18.58■□□□□ 0.56
SHANK3-202ENST00000414786 ELOVL4Q9GZR5 314 aa18.58■□□□□ 0.56
SHANK3-202ENST00000414786 GANQ9H2C0 597 aa18.58■□□□□ 0.56
SHANK3-202ENST00000414786 VPS4AQ9UN37 437 aa18.58■□□□□ 0.56
SHANK3-202ENST00000414786 PGM5Q15124 567 aa18.58■□□□□ 0.56
SHANK3-202ENST00000414786 FRRS1Q6ZNA5 592 aa18.58■□□□□ 0.56
SHANK3-202ENST00000414786 QRFPRQ96P65 431 aa18.58■□□□□ 0.56
SHANK3-202ENST00000414786 ADGRA3Q8IWK6 1321 aa18.58■□□□□ 0.56
SHANK3-202ENST00000414786 A0A1B0GTH6 734 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 DDTLA6NHG4 134 aaPredicted RBP18.57■□□□□ 0.56
SHANK3-202ENST00000414786 STBD1O95210 358 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 KCNT2Q6UVM3 1135 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 OAFQ86UD1 273 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 TCP10LQ8TDR4 215 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 HMG20AQ9NP66 347 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 NCDNQ9UBB6 729 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 FBXW2Q9UKT8 454 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 CCNB2O95067 398 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 NELFEP18615 380 aaKnown RBP18.57■□□□□ 0.56
SHANK3-202ENST00000414786 ALDH4A1P30038 563 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 GMFBP60983 142 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 SEMG2Q02383 582 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 SWI5Q1ZZU3 235 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 ZMIZ2Q8NF64 920 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 OR8D1Q8WZ84 308 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 PCDHGB3Q9Y5G1 929 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 UGT2B15P54855 530 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 GRB10Q13322 594 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 DNASE1L3Q13609 305 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 ZNF540Q8NDQ6 660 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 AGBL3Q8NEM8 1001 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 TMCC2O75069 709 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 AP1S2P56377 157 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 ENPEPQ07075 957 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 SLC8B1Q6J4K2 584 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 TFECO14948 347 aaPredicted RBP18.57■□□□□ 0.56
SHANK3-202ENST00000414786 TRAPPC6AO75865 159 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 ALDH3A2P51648 485 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 DGUOKQ16854 277 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 RAVER1Q8IY67 606 aaKnown RBP18.57■□□□□ 0.56
SHANK3-202ENST00000414786 PNO1Q9NRX1 252 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms