RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 GVINP1Q7Z2Y8 2422 aa14.85□□□□□ -0.03
CHD1-202ENST00000414220 USP34Q70CQ2 3546 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 CEP192Q8TEP8 1941 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 TSPAN11A1L157 253 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 C3orf70A6NLC5 250 aaPredicted RBP14.84□□□□□ -0.03
CHD1-202ENST00000414220 MIF4GDA9UHW6 222 aaKnown RBP14.84□□□□□ -0.03
CHD1-202ENST00000414220 TLR4O00206 839 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 RNF103O00237 685 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 FPGTO14772 594 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 AREL1O15033 823 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 YKT6O15498 198 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 CST8O60676 142 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 MAP3K6O95382 1288 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 PEX11BO96011 259 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 CCDC175P0C221 793 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 ZNF883P0CG24 379 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 CTNNA2P26232 953 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 ABL2P42684 1182 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 CDKN2BP42772 138 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 ARRB1P49407 418 aaPredicted RBP14.84□□□□□ -0.03
CHD1-202ENST00000414220 PPIDQ08752 370 aaKnown RBP14.84□□□□□ -0.03
CHD1-202ENST00000414220 PPP2R5EQ16537 467 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 KIF19Q2TAC6 998 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 ZNF284Q2VY69 593 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 HLA-BQ31612 363 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 ERMP1Q7Z2K6 904 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 DCP2Q8IU60 420 aaKnown RBP14.84□□□□□ -0.03
CHD1-202ENST00000414220 LRRC8AQ8IWT6 810 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 PLD5Q8N7P1 536 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 PDCD6IPQ8WUM4 868 aaKnown RBP14.84□□□□□ -0.03
CHD1-202ENST00000414220 MAML1Q92585 1016 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 ORAI3Q9BRQ5 295 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 GOLPH3Q9H4A6 298 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 EBF2Q9HAK2 575 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 FSCN3Q9NQT6 498 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 SALL4Q9UJQ4 1053 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 SNX11Q9Y5W9 270 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 HS3ST3A1Q9Y663 406 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 GON4LQ3T8J9 2241 aa14.84□□□□□ -0.03
CHD1-202ENST00000414220 CFAP69A5D8W1 941 aa14.83□□□□□ -0.04
CHD1-202ENST00000414220 GOLGA6L9A6NEM1 432 aa14.83□□□□□ -0.04
CHD1-202ENST00000414220 IGLON5A6NGN9 336 aa14.83□□□□□ -0.04
CHD1-202ENST00000414220 C10orf142B7Z368 130 aa14.83□□□□□ -0.04
CHD1-202ENST00000414220 MTSS1O43312 755 aa14.83□□□□□ -0.04
CHD1-202ENST00000414220 LZTS3O60299 673 aaPredicted RBP14.83□□□□□ -0.04
CHD1-202ENST00000414220 ZNF189O75820 626 aaPredicted RBP14.83□□□□□ -0.04
CHD1-202ENST00000414220 PAK4O96013 591 aaPredicted RBP14.83□□□□□ -0.04
CHD1-202ENST00000414220 PRLRP16471 622 aa14.83□□□□□ -0.04
CHD1-202ENST00000414220 RGRP47804 291 aa14.83□□□□□ -0.04
CHD1-202ENST00000414220 CCT8P50990 548 aa14.83□□□□□ -0.04
CHD1-202ENST00000414220 MAXP61244 160 aa14.83□□□□□ -0.04
CHD1-202ENST00000414220 FAM193AP78312 1265 aa14.83□□□□□ -0.04
CHD1-202ENST00000414220 INAVAQ3KP66 663 aa14.83□□□□□ -0.04
CHD1-202ENST00000414220 TMEM52BQ4KMG9 183 aa14.83□□□□□ -0.04
CHD1-202ENST00000414220 TMEM259Q4ZIN3 620 aa14.83□□□□□ -0.04
CHD1-202ENST00000414220 ARMC12Q5T9G4 340 aa14.83□□□□□ -0.04
CHD1-202ENST00000414220 SEL1L3Q68CR1 1132 aa14.83□□□□□ -0.04
CHD1-202ENST00000414220 DENND6BQ8NEG7 585 aa14.83□□□□□ -0.04
CHD1-202ENST00000414220 KLK6Q92876 244 aa14.83□□□□□ -0.04
CHD1-202ENST00000414220 LENG8Q96PV6 779 aaPredicted RBP14.83□□□□□ -0.04
CHD1-202ENST00000414220 SEMA3CQ99985 751 aa14.83□□□□□ -0.04
CHD1-202ENST00000414220 NOD2Q9HC29 1040 aa14.83□□□□□ -0.04
CHD1-202ENST00000414220 TM7SF3Q9NS93 570 aa14.83□□□□□ -0.04
CHD1-202ENST00000414220 PHTF1Q9UMS5 762 aa14.83□□□□□ -0.04
CHD1-202ENST00000414220 EFR3BQ9Y2G0 817 aa14.83□□□□□ -0.04
CHD1-202ENST00000414220 ATP8A1Q9Y2Q0 1164 aa14.83□□□□□ -0.04
CHD1-202ENST00000414220 PCDHB9Q9Y5E1 797 aa14.83□□□□□ -0.04
CHD1-202ENST00000414220 ADGRG1Q9Y653 693 aa14.83□□□□□ -0.04
CHD1-202ENST00000414220 hCG_1818297A0A087WSY0 165 aa14.82□□□□□ -0.04
CHD1-202ENST00000414220 DCDC2BA2VCK2 349 aa14.82□□□□□ -0.04
CHD1-202ENST00000414220 A6NNZ2 444 aa14.82□□□□□ -0.04
CHD1-202ENST00000414220 RIOK3O14730 519 aaKnown RBP14.82□□□□□ -0.04
CHD1-202ENST00000414220 MUSKO15146 869 aa14.82□□□□□ -0.04
CHD1-202ENST00000414220 TJP3O95049 919 aa14.82□□□□□ -0.04
CHD1-202ENST00000414220 CPP00450 1065 aa14.82□□□□□ -0.04
CHD1-202ENST00000414220 JCHAINP01591 159 aa14.82□□□□□ -0.04
CHD1-202ENST00000414220 CYP2A6P11509 494 aaPredicted RBP14.82□□□□□ -0.04
CHD1-202ENST00000414220 CR2P20023 1033 aa14.82□□□□□ -0.04
CHD1-202ENST00000414220 CSRP1P21291 193 aaKnown RBP14.82□□□□□ -0.04
CHD1-202ENST00000414220 CTSKP43235 329 aa14.82□□□□□ -0.04
CHD1-202ENST00000414220 EPHB1P54762 984 aa14.82□□□□□ -0.04
CHD1-202ENST00000414220 SLC10A2Q12908 348 aaPredicted RBP14.82□□□□□ -0.04
CHD1-202ENST00000414220 TAZQ16635 292 aa14.82□□□□□ -0.04
CHD1-202ENST00000414220 TFB1MQ8WVM0 346 aaKnown RBP14.82□□□□□ -0.04
CHD1-202ENST00000414220 ECHDC3Q96DC8 303 aa14.82□□□□□ -0.04
CHD1-202ENST00000414220 ALS2CR12Q96Q35 445 aa14.82□□□□□ -0.04
CHD1-202ENST00000414220 LGMNQ99538 433 aa14.82□□□□□ -0.04
CHD1-202ENST00000414220 C1QTNF2Q9BXJ5 285 aa14.82□□□□□ -0.04
CHD1-202ENST00000414220 ERVMER34-1Q9H9K5 563 aa14.82□□□□□ -0.04
CHD1-202ENST00000414220 PCDH12Q9NPG4 1184 aa14.82□□□□□ -0.04
CHD1-202ENST00000414220 KCTD5Q9NXV2 234 aa14.82□□□□□ -0.04
CHD1-202ENST00000414220 SEPT10Q9P0V9 454 aa14.82□□□□□ -0.04
CHD1-202ENST00000414220 ZFR2Q9UPR6 939 aaKnown RBP14.82□□□□□ -0.04
CHD1-202ENST00000414220 PCDHGC4Q9Y5F7 938 aa14.82□□□□□ -0.04
CHD1-202ENST00000414220 PCDHGB2Q9Y5G2 931 aa14.82□□□□□ -0.04
CHD1-202ENST00000414220 TNRC6BQ9UPQ9 1833 aaKnown RBP14.82□□□□□ -0.04
CHD1-202ENST00000414220 NYNRINQ9P2P1 1898 aaKnown RBP14.82□□□□□ -0.04
CHD1-202ENST00000414220 NUMA1Q14980 2115 aa14.81□□□□□ -0.04
CHD1-202ENST00000414220 A0A1W2PR77 199 aa14.81□□□□□ -0.04
CHD1-202ENST00000414220 GRID2IPA4D2P6 1211 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms