RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 NSMCE1Q8WV22 266 aa14.95□□□□□ -0.02
LIMS4-201ENST00000413601 FAF2Q96CS3 445 aa14.95□□□□□ -0.02
LIMS4-201ENST00000413601 LENG8Q96PV6 779 aaPredicted RBP14.95□□□□□ -0.02
LIMS4-201ENST00000413601 PANX2Q96RD6 677 aa14.95□□□□□ -0.02
LIMS4-201ENST00000413601 PCDH12Q9NPG4 1184 aa14.95□□□□□ -0.02
LIMS4-201ENST00000413601 ANGPTL2Q9UKU9 493 aa14.95□□□□□ -0.02
LIMS4-201ENST00000413601 TFR2Q9UP52 801 aa14.95□□□□□ -0.02
LIMS4-201ENST00000413601 LRRD1A4D1F6 860 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 SOWAHDA6NJG2 315 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 RIOK3O14730 519 aaKnown RBP14.94□□□□□ -0.02
LIMS4-201ENST00000413601 YKT6O15498 198 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 TM7SF2O76062 418 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 ITGAVP06756 1048 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 TNNT1P13805 278 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 SPINK2P20155 84 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 EPHA8P29322 1005 aaPredicted RBP14.94□□□□□ -0.02
LIMS4-201ENST00000413601 HSPA9P38646 679 aaKnown RBP14.94□□□□□ -0.02
LIMS4-201ENST00000413601 GARSP41250 739 aaKnown RBP14.94□□□□□ -0.02
LIMS4-201ENST00000413601 GRK6P43250 576 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 MMP13P45452 471 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 NOP2P46087 812 aaKnown RBP14.94□□□□□ -0.02
LIMS4-201ENST00000413601 RXRGP48443 463 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 SUOXP51687 545 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 MAXP61244 160 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 AP1S1P61966 158 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 ELP6Q0PNE2 266 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 GALNT2Q10471 571 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 SPA17Q15506 151 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 TMEM52BQ4KMG9 183 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 MARC1Q5VT66 337 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 KDM7AQ6ZMT4 941 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 PTAR1Q7Z6K3 402 aaPredicted RBP14.94□□□□□ -0.02
LIMS4-201ENST00000413601 GLRX5Q86SX6 157 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 LRRC49Q8IUZ0 686 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 SLC22A18ASQ8N1D0 253 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 BBS5Q8N3I7 341 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 OXR1Q8N573 874 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 PAF1Q8N7H5 531 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 PNPLA1Q8N8W4 532 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 LRRN4Q8WUT4 740 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 ASB12Q8WXK4 309 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 RNF157Q96PX1 679 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 CDC6Q99741 560 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 CAAP1Q9H8G2 361 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 COQ6Q9Y2Z9 468 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 PCDHA13Q9Y5I0 950 aa14.94□□□□□ -0.02
LIMS4-201ENST00000413601 ARID1BQ8NFD5 2236 aaPredicted RBP14.93□□□□□ -0.02
LIMS4-201ENST00000413601 C3orf70A6NLC5 250 aaPredicted RBP14.93□□□□□ -0.02
LIMS4-201ENST00000413601 TRAFD1O14545 582 aaPredicted RBP14.93□□□□□ -0.02
LIMS4-201ENST00000413601 FPGTO14772 594 aa14.93□□□□□ -0.02
LIMS4-201ENST00000413601 SDC3O75056 442 aa14.93□□□□□ -0.02
LIMS4-201ENST00000413601 FTH1P19P0C7X4 201 aa14.93□□□□□ -0.02
LIMS4-201ENST00000413601 CR2P20023 1033 aa14.93□□□□□ -0.02
LIMS4-201ENST00000413601 COMTP21964 271 aa14.93□□□□□ -0.02
LIMS4-201ENST00000413601 CYLC1P35663 651 aaPredicted RBP14.93□□□□□ -0.02
LIMS4-201ENST00000413601 SLC1A1P43005 524 aa14.93□□□□□ -0.02
LIMS4-201ENST00000413601 SHC2P98077 582 aa14.93□□□□□ -0.02
LIMS4-201ENST00000413601 GBE1Q04446 702 aa14.93□□□□□ -0.02
LIMS4-201ENST00000413601 SLC10A2Q12908 348 aaPredicted RBP14.93□□□□□ -0.02
LIMS4-201ENST00000413601 IFI16Q16666 785 aaKnown RBP14.93□□□□□ -0.02
LIMS4-201ENST00000413601 ERAP2Q6P179 960 aa14.93□□□□□ -0.02
LIMS4-201ENST00000413601 KYAT3Q6YP21 454 aaKnown RBP14.93□□□□□ -0.02
LIMS4-201ENST00000413601 SLCO6A1Q86UG4 719 aa14.93□□□□□ -0.02
LIMS4-201ENST00000413601 EID2Q8N6I1 236 aa14.93□□□□□ -0.02
LIMS4-201ENST00000413601 FAM174AQ8TBP5 190 aa14.93□□□□□ -0.02
LIMS4-201ENST00000413601 CENPTQ96BT3 561 aa14.93□□□□□ -0.02
LIMS4-201ENST00000413601 ECHDC3Q96DC8 303 aa14.93□□□□□ -0.02
LIMS4-201ENST00000413601 NUDCD1Q96RS6 583 aa14.93□□□□□ -0.02
LIMS4-201ENST00000413601 MGME1Q9BQP7 344 aa14.93□□□□□ -0.02
LIMS4-201ENST00000413601 NOD2Q9HC29 1040 aa14.93□□□□□ -0.02
LIMS4-201ENST00000413601 NT5MQ9NPB1 228 aa14.93□□□□□ -0.02
LIMS4-201ENST00000413601 SCUBE2Q9NQ36 999 aa14.93□□□□□ -0.02
LIMS4-201ENST00000413601 WASF3Q9UPY6 502 aa14.93□□□□□ -0.02
LIMS4-201ENST00000413601 ATP8A1Q9Y2Q0 1164 aa14.93□□□□□ -0.02
LIMS4-201ENST00000413601 PCDHGC4Q9Y5F7 938 aa14.93□□□□□ -0.02
LIMS4-201ENST00000413601 EPN1Q9Y6I3 576 aaPredicted RBP14.93□□□□□ -0.02
LIMS4-201ENST00000413601 LRP4O75096 1905 aa14.92□□□□□ -0.02
LIMS4-201ENST00000413601 PLXNB3Q9ULL4 1909 aa14.92□□□□□ -0.02
LIMS4-201ENST00000413601 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.92□□□□□ -0.02
LIMS4-201ENST00000413601 GOLGA8CPA6NN73 597 aa14.92□□□□□ -0.02
LIMS4-201ENST00000413601 SPOPO43791 374 aa14.92□□□□□ -0.02
LIMS4-201ENST00000413601 HYAL3O43820 417 aaPredicted RBP14.92□□□□□ -0.02
LIMS4-201ENST00000413601 KRT1P04264 644 aa14.92□□□□□ -0.02
LIMS4-201ENST00000413601 ATXN1LP0C7T5 689 aaKnown RBP14.92□□□□□ -0.02
LIMS4-201ENST00000413601 FECHP22830 423 aa14.92□□□□□ -0.02
LIMS4-201ENST00000413601 CCNCP24863 283 aa14.92□□□□□ -0.02
LIMS4-201ENST00000413601 IGFALSP35858 605 aa14.92□□□□□ -0.02
LIMS4-201ENST00000413601 MMP12P39900 470 aa14.92□□□□□ -0.02
LIMS4-201ENST00000413601 LIG3P49916 1009 aa14.92□□□□□ -0.02
LIMS4-201ENST00000413601 HADHBP55084 474 aaKnown RBP14.92□□□□□ -0.02
LIMS4-201ENST00000413601 INAVAQ3KP66 663 aa14.92□□□□□ -0.02
LIMS4-201ENST00000413601 ZNF542PQ5EBM4 170 aa14.92□□□□□ -0.02
LIMS4-201ENST00000413601 LRRC38Q5VT99 294 aa14.92□□□□□ -0.02
LIMS4-201ENST00000413601 KANSL1Q7Z3B3 1105 aa14.92□□□□□ -0.02
LIMS4-201ENST00000413601 DCP2Q8IU60 420 aaKnown RBP14.92□□□□□ -0.02
LIMS4-201ENST00000413601 TMTC1Q8IUR5 882 aa14.92□□□□□ -0.02
LIMS4-201ENST00000413601 RHOT1Q8IXI2 618 aa14.92□□□□□ -0.02
LIMS4-201ENST00000413601 TEX26Q8N6G2 289 aa14.92□□□□□ -0.02
LIMS4-201ENST00000413601 DENND6BQ8NEG7 585 aa14.92□□□□□ -0.02
LIMS4-201ENST00000413601 PDCD6IPQ8WUM4 868 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms