RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 CAMK1DQ8IU85 385 aa16.67■□□□□ 0.26
SCAMP4-203ENST00000411971 SFTPA2Q8IWL1 248 aa16.67■□□□□ 0.26
SCAMP4-203ENST00000411971 ARHGAP12Q8IWW6 846 aa16.67■□□□□ 0.26
SCAMP4-203ENST00000411971 NPWQ8N729 165 aa16.67■□□□□ 0.26
SCAMP4-203ENST00000411971 MAPK15Q8TD08 544 aa16.67■□□□□ 0.26
SCAMP4-203ENST00000411971 TSACCQ96A04 125 aaPredicted RBP16.67■□□□□ 0.26
SCAMP4-203ENST00000411971 KCTD15Q96SI1 283 aaPredicted RBP16.67■□□□□ 0.26
SCAMP4-203ENST00000411971 PCDH12Q9NPG4 1184 aa16.67■□□□□ 0.26
SCAMP4-203ENST00000411971 ANO10Q9NW15 660 aa16.67■□□□□ 0.26
SCAMP4-203ENST00000411971 APOBEC3BQ9UH17 382 aaKnown RBP16.67■□□□□ 0.26
SCAMP4-203ENST00000411971 RABGEF1Q9UJ41 708 aa16.67■□□□□ 0.26
SCAMP4-203ENST00000411971 ZSCAN5CA6NGD5 496 aaPredicted RBP16.66■□□□□ 0.26
SCAMP4-203ENST00000411971 YY2O15391 372 aa16.66■□□□□ 0.26
SCAMP4-203ENST00000411971 LZTS3O60299 673 aaPredicted RBP16.66■□□□□ 0.26
SCAMP4-203ENST00000411971 TSHRP16473 764 aa16.66■□□□□ 0.26
SCAMP4-203ENST00000411971 GM2AP17900 193 aa16.66■□□□□ 0.26
SCAMP4-203ENST00000411971 HS1BP3Q53T59 392 aa16.66■□□□□ 0.26
SCAMP4-203ENST00000411971 PELI3Q8N2H9 469 aa16.66■□□□□ 0.26
SCAMP4-203ENST00000411971 PLA2G15Q8NCC3 412 aa16.66■□□□□ 0.26
SCAMP4-203ENST00000411971 TSEN2Q8NCE0 465 aaKnown RBP16.66■□□□□ 0.26
SCAMP4-203ENST00000411971 ATXN7L3BQ96GX2 97 aa16.66■□□□□ 0.26
SCAMP4-203ENST00000411971 FCRL3Q96P31 734 aaPredicted RBP16.66■□□□□ 0.26
SCAMP4-203ENST00000411971 SNRNP25Q9BV90 132 aaKnown RBP16.66■□□□□ 0.26
SCAMP4-203ENST00000411971 DUSP23Q9BVJ7 150 aa16.66■□□□□ 0.26
SCAMP4-203ENST00000411971 CPEB1Q9BZB8 566 aaKnown RBP16.66■□□□□ 0.26
SCAMP4-203ENST00000411971 SALL4Q9UJQ4 1053 aa16.66■□□□□ 0.26
SCAMP4-203ENST00000411971 ENTPD2Q9Y5L3 495 aa16.66■□□□□ 0.26
SCAMP4-203ENST00000411971 UNC13CQ8NB66 2214 aa16.66■□□□□ 0.26
SCAMP4-203ENST00000411971 HELZ2Q9BYK8 2649 aaKnown RBP16.66■□□□□ 0.26
SCAMP4-203ENST00000411971 TTC24A2A3L6 582 aaPredicted RBP16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 H3BM21 787 aa16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 TPP1O14773 563 aa16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 PRAMEF11O60813 436 aa16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 TPM2P07951 284 aa16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 C6P13671 934 aa16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 TCF4P15884 667 aa16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 ACTN2P35609 894 aa16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 PAPOLAP51003 745 aaKnown RBP16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 THOP1P52888 689 aa16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 RALGDSQ12967 914 aa16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 ALG11Q2TAA5 492 aa16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 PARP15Q460N3 678 aa16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 AFMIDQ63HM1 303 aa16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 PLEKHA7Q6IQ23 1121 aa16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 SASS6Q6UVJ0 657 aa16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 MACC1Q6ZN28 852 aa16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 LRRC69Q6ZNQ3 347 aa16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 ZSCAN30Q86W11 494 aa16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 CXorf40AQ8TE69 158 aa16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 CASKIN2Q8WXE0 1202 aa16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 DEPDC7Q96QD5 511 aa16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 SUV39H2Q9H5I1 410 aa16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 TMEM63CQ9P1W3 806 aa16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 UBA2Q9UBT2 640 aaPredicted RBP16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 PCSK1NQ9UHG2 260 aa16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 AP4E1Q9UPM8 1137 aa16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 SATB2Q9UPW6 733 aa16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 OR1A2Q9Y585 309 aa16.65■□□□□ 0.26
SCAMP4-203ENST00000411971 LRRC53A6NM62 1247 aa16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 LMO7DNF2Z398 122 aa16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 RIOK3O14730 519 aaKnown RBP16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 DXOO77932 396 aaKnown RBP16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 FERP16591 822 aa16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 MMP12P39900 470 aa16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 LSSP48449 732 aa16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 DUSP3P51452 185 aaPredicted RBP16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 TPI1P60174 286 aa16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 YPEL5P62699 121 aa16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 TYRO3Q06418 890 aa16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 UGP2Q16851 508 aa16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 C3orf38Q5JPI3 329 aa16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 C6orf132Q5T0Z8 1188 aa16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 FAXCQ5TGI0 409 aa16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 DCUN1D2Q6PH85 259 aa16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 ZNF571Q7Z3V5 609 aaPredicted RBP16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 ARHGEF26Q96DR7 871 aa16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 UBL7Q96S82 380 aaPredicted RBP16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 IL12RB2Q99665 862 aa16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 DHX35Q9H5Z1 703 aaKnown RBP16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 CATSPERBQ9H7T0 1116 aa16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 POLR1BQ9H9Y6 1135 aa16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 USP29Q9HBJ7 922 aa16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 CPNE5Q9HCH3 593 aa16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 RTN4Q9NQC3 1192 aaKnown RBP16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 SPASTQ9UBP0 616 aa16.64■□□□□ 0.25
SCAMP4-203ENST00000411971 TMEM191CA6NGB0 347 aa16.63■□□□□ 0.25
SCAMP4-203ENST00000411971 DDX3XO00571 662 aaKnown RBP eCLIP16.63■□□□□ 0.256e-12■□□□□ 10.5
SCAMP4-203ENST00000411971 RRP8O43159 456 aaKnown RBP16.63■□□□□ 0.25
SCAMP4-203ENST00000411971 ERCC2P18074 760 aa16.63■□□□□ 0.25
SCAMP4-203ENST00000411971 CDK11BP21127 795 aaKnown RBP16.63■□□□□ 0.25
SCAMP4-203ENST00000411971 PSMA2P25787 234 aa16.63■□□□□ 0.25
SCAMP4-203ENST00000411971 LIG3P49916 1009 aa16.63■□□□□ 0.25
SCAMP4-203ENST00000411971 INPP5AQ14642 412 aa16.63■□□□□ 0.25
SCAMP4-203ENST00000411971 NR0B2Q15466 257 aa16.63■□□□□ 0.25
SCAMP4-203ENST00000411971 HID1Q8IV36 788 aa16.63■□□□□ 0.25
SCAMP4-203ENST00000411971 KYQ8NBH2 561 aa16.63■□□□□ 0.25
SCAMP4-203ENST00000411971 PCDH19Q8TAB3 1148 aa16.63■□□□□ 0.25
SCAMP4-203ENST00000411971 VCPIP1Q96JH7 1222 aa16.63■□□□□ 0.25
SCAMP4-203ENST00000411971 NAP1L5Q96NT1 182 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms