RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 SLC16A2P36021 539 aa5.37□□□□□ -1.55
LSM5-206ENST00000409987 CPOXP36551 454 aa5.37□□□□□ -1.55
LSM5-206ENST00000409987 PSMB10P40306 273 aa5.37□□□□□ -1.55
LSM5-206ENST00000409987 HADHAP40939 763 aa5.37□□□□□ -1.55
LSM5-206ENST00000409987 ARHGAP25P42331 645 aa5.37□□□□□ -1.55
LSM5-206ENST00000409987 RPS13P62277 151 aaKnown RBP5.37□□□□□ -1.55
LSM5-206ENST00000409987 TMEM115Q12893 351 aaPredicted RBP5.37□□□□□ -1.55
LSM5-206ENST00000409987 DAZAP2Q15038 168 aaPredicted RBP5.37□□□□□ -1.55
LSM5-206ENST00000409987 TMEM266Q2M3C6 531 aa5.37□□□□□ -1.55
LSM5-206ENST00000409987 CDC73Q6P1J9 531 aa5.37□□□□□ -1.55
LSM5-206ENST00000409987 FAM47EQ6ZV65 393 aa5.37□□□□□ -1.55
LSM5-206ENST00000409987 PRIMA1Q86XR5 153 aa5.37□□□□□ -1.55
LSM5-206ENST00000409987 CEP57L1Q8IYX8 460 aa5.37□□□□□ -1.55
LSM5-206ENST00000409987 AVL9Q8NBF6 648 aa5.37□□□□□ -1.55
LSM5-206ENST00000409987 SIGLEC11Q96RL6 698 aa5.37□□□□□ -1.55
LSM5-206ENST00000409987 NCAPGQ9BPX3 1015 aa5.37□□□□□ -1.55
LSM5-206ENST00000409987 MORF4L1Q9UBU8 362 aa5.37□□□□□ -1.55
LSM5-206ENST00000409987 AGO2Q9UKV8 859 aaKnown RBP5.37□□□□□ -1.55
LSM5-206ENST00000409987 MKLN1Q9UL63 735 aa5.37□□□□□ -1.55
LSM5-206ENST00000409987 CAPN7Q9Y6W3 813 aa5.37□□□□□ -1.55
LSM5-206ENST00000409987 ZNF335Q9H4Z2 1342 aaPredicted RBP5.37□□□□□ -1.55
LSM5-206ENST00000409987 UBE2CO00762 179 aa5.36□□□□□ -1.55
LSM5-206ENST00000409987 RNMTO43148 476 aaKnown RBP5.36□□□□□ -1.55
LSM5-206ENST00000409987 SLC25A17O43808 307 aa5.36□□□□□ -1.55
LSM5-206ENST00000409987 UNGP13051 313 aaPredicted RBP5.36□□□□□ -1.55
LSM5-206ENST00000409987 POU1F1P28069 291 aa5.36□□□□□ -1.55
LSM5-206ENST00000409987 EPHB2P29323 1055 aa5.36□□□□□ -1.55
LSM5-206ENST00000409987 PBX3P40426 434 aa5.36□□□□□ -1.55
LSM5-206ENST00000409987 PIK3CAP42336 1068 aa5.36□□□□□ -1.55
LSM5-206ENST00000409987 YWHAZP63104 245 aaKnown RBP5.36□□□□□ -1.55
LSM5-206ENST00000409987 SUPT20HL1Q3ZLR7 823 aa5.36□□□□□ -1.55
LSM5-206ENST00000409987 ASPHD1Q5U4P2 390 aa5.36□□□□□ -1.55
LSM5-206ENST00000409987 ATG9BQ674R7 924 aa5.36□□□□□ -1.55
LSM5-206ENST00000409987 TXNDC8Q6A555 127 aa5.36□□□□□ -1.55
LSM5-206ENST00000409987 ZNF793Q6ZN11 406 aa5.36□□□□□ -1.55
LSM5-206ENST00000409987 MFSD6Q6ZSS7 791 aa5.36□□□□□ -1.55
LSM5-206ENST00000409987 IKBIPQ70UQ0 350 aa5.36□□□□□ -1.55
LSM5-206ENST00000409987 CADM3Q8N126 398 aa5.36□□□□□ -1.55
LSM5-206ENST00000409987 SLC25A41Q8N5S1 370 aa5.36□□□□□ -1.55
LSM5-206ENST00000409987 KCTD6Q8NC69 237 aa5.36□□□□□ -1.55
LSM5-206ENST00000409987 DDB2Q92466 427 aa5.36□□□□□ -1.55
LSM5-206ENST00000409987 ATOH1Q92858 354 aaPredicted RBP5.36□□□□□ -1.55
LSM5-206ENST00000409987 SORCS2Q96PQ0 1159 aa5.36□□□□□ -1.55
LSM5-206ENST00000409987 SEZ6LQ9BYH1 1024 aa5.36□□□□□ -1.55
LSM5-206ENST00000409987 SCPEP1Q9HB40 452 aa5.36□□□□□ -1.55
LSM5-206ENST00000409987 WDR6Q9NNW5 1121 aaKnown RBP5.36□□□□□ -1.55
LSM5-206ENST00000409987 PNRC2Q9NPJ4 139 aaKnown RBP5.36□□□□□ -1.55
LSM5-206ENST00000409987 TMEM184CQ9NVA4 438 aa5.36□□□□□ -1.55
LSM5-206ENST00000409987 HCFC1R1Q9NWW0 138 aa5.36□□□□□ -1.55
LSM5-206ENST00000409987 FLRT1Q9NZU1 646 aa5.36□□□□□ -1.55
LSM5-206ENST00000409987 LIMA1Q9UHB6 759 aaKnown RBP5.36□□□□□ -1.55
LSM5-206ENST00000409987 INTS6Q9UL03 887 aaKnown RBP5.36□□□□□ -1.55
LSM5-206ENST00000409987 KCNE2Q9Y6J6 123 aa5.36□□□□□ -1.55
LSM5-206ENST00000409987 RUSC2Q8N2Y8 1516 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 A0A0G2JK05 382 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 PI4K2BG5E9Z4 385 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 SNAP23O00161 211 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 SH2B2O14492 632 aaPredicted RBP5.35□□□□□ -1.55
LSM5-206ENST00000409987 PRPF4O43172 522 aaKnown RBP eCLIP5.35□□□□□ -1.55
LSM5-206ENST00000409987 LIASO43766 372 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 SLC2A4P14672 509 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 HOXD9P28356 352 aaPredicted RBP5.35□□□□□ -1.55
LSM5-206ENST00000409987 EIF2DP41214 584 aaKnown RBP5.35□□□□□ -1.55
LSM5-206ENST00000409987 MSH2P43246 934 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 CENPAP49450 140 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 CLDN2P57739 230 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 OLR1P78380 273 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 ZNF91Q05481 1191 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 RNPS1Q15287 305 aaKnown RBP5.35□□□□□ -1.55
LSM5-206ENST00000409987 MED22Q15528 200 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 SMTNL2Q2TAL5 461 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 C1orf141Q5JVX7 400 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 SLC18B1Q6NT16 456 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 CYP20A1Q6UW02 462 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 DNAJB7Q7Z6W7 309 aaPredicted RBP5.35□□□□□ -1.55
LSM5-206ENST00000409987 SERPINA11Q86U17 422 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 C17orf53Q8N3J3 647 aaPredicted RBP5.35□□□□□ -1.55
LSM5-206ENST00000409987 DPP10Q8N608 796 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 LRRC57Q8N9N7 239 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 JAKMIP2Q96AA8 810 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 INTS12Q96CB8 462 aaKnown RBP5.35□□□□□ -1.55
LSM5-206ENST00000409987 DESI2Q9BSY9 194 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 TUBB6Q9BUF5 446 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 MRIQ9BWK5 157 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 SEMA4CQ9C0C4 833 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 RABEP2Q9H5N1 569 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 THSD1Q9NS62 852 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 RNF146Q9NTX7 359 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 NCKIPSDQ9NZQ3 722 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 MTRRQ9UBK8 725 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 SLCO3A1Q9UIG8 710 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 A4GNTQ9UNA3 340 aa5.35□□□□□ -1.55
LSM5-206ENST00000409987 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.35□□□□□ -1.55
LSM5-206ENST00000409987 TAF4O00268 1085 aa5.34□□□□□ -1.55
LSM5-206ENST00000409987 EBAG9O00559 213 aa5.34□□□□□ -1.55
LSM5-206ENST00000409987 ADAM10O14672 748 aa5.34□□□□□ -1.55
LSM5-206ENST00000409987 TOP3BO95985 862 aaKnown RBP5.34□□□□□ -1.55
LSM5-206ENST00000409987 ZNF8P17098 575 aaPredicted RBP5.34□□□□□ -1.55
LSM5-206ENST00000409987 CTPS1P17812 591 aa5.34□□□□□ -1.55
LSM5-206ENST00000409987 NFKBIAP25963 317 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms