RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 PPP2R3CQ969Q6 453 aa5.57□□□□□ -1.52
EPHA4-202ENST00000409854 SERAC1Q96JX3 654 aa5.57□□□□□ -1.52
EPHA4-202ENST00000409854 ASB16Q96NS5 453 aa5.57□□□□□ -1.52
EPHA4-202ENST00000409854 LRRC3BQ96PB8 259 aa5.57□□□□□ -1.52
EPHA4-202ENST00000409854 SMC6Q96SB8 1091 aa5.57□□□□□ -1.52
EPHA4-202ENST00000409854 RBBP8Q99708 897 aa5.57□□□□□ -1.52
EPHA4-202ENST00000409854 NSMCE4AQ9NXX6 385 aa5.57□□□□□ -1.52
EPHA4-202ENST00000409854 PLK2Q9NYY3 685 aa5.57□□□□□ -1.52
EPHA4-202ENST00000409854 ZFATQ9P243 1243 aa5.57□□□□□ -1.52
EPHA4-202ENST00000409854 HS3ST2Q9Y278 367 aa5.57□□□□□ -1.52
EPHA4-202ENST00000409854 PSAT1Q9Y617 370 aa5.57□□□□□ -1.52
EPHA4-202ENST00000409854 PLXNA2O75051 1894 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 FAM47DPA6NHR8 397 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 HOXC11O43248 304 aaPredicted RBP5.56□□□□□ -1.52
EPHA4-202ENST00000409854 LDB2O43679 373 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 PAX7P23759 505 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 FSHRP23945 695 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 FCARP24071 287 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 GP5P40197 560 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 NEK3P51956 506 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 CSE1LP55060 971 aaKnown RBP5.56□□□□□ -1.52
EPHA4-202ENST00000409854 AP1S1P61966 158 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 LAMB3Q13751 1172 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 EML3Q32P44 896 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 GRTP1Q5TC63 336 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 LGSNQ5TDP6 509 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 SYCE2Q6PIF2 218 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 EP400NLQ6ZTU2 488 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 GALNT7Q86SF2 657 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 SLC25A41Q8N5S1 370 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 OR13J1Q8NGT2 312 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 OSCP1Q8WVF1 389 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 ISG20Q96AZ6 181 aaKnown RBP5.56□□□□□ -1.52
EPHA4-202ENST00000409854 TIFAQ96CG3 184 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 MRRFQ96E11 262 aaKnown RBP5.56□□□□□ -1.52
EPHA4-202ENST00000409854 IFT43Q96FT9 208 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 APOPT1Q96IL0 206 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 LINC00597Q9H2U6 94 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 GDE1Q9NZC3 331 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 SLC17A6Q9P2U8 582 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 TICRRQ7Z2Z1 1910 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 TRIM49D1C9J1S8 452 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 NEDD8-MDP1E9PL57 170 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 RFXAPO00287 272 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 ZWINTO95229 277 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 ASMTLO95671 621 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 MT-CO1P00395 513 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 TYRP14679 529 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 KRT4P19013 534 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 PAMP19021 973 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 NUMBP49757 651 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 SCNN1BP51168 640 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 LIMK2P53671 638 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 RHOAP61586 193 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 TRAF2Q12933 501 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 CBX2Q14781 532 aaPredicted RBP5.56□□□□□ -1.52
EPHA4-202ENST00000409854 FAM78AQ5JUQ0 283 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 LY6G5CQ5SRR4 150 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 RARS2Q5T160 578 aaKnown RBP5.56□□□□□ -1.52
EPHA4-202ENST00000409854 ESRP1Q6NXG1 681 aaKnown RBP5.56□□□□□ -1.52
EPHA4-202ENST00000409854 SRLQ86TD4 932 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 C4orf33Q8N1A6 199 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 ACMSDQ8TDX5 336 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 SMARCD2Q92925 531 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 BHMTQ93088 406 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 EXOC2Q96KP1 924 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 BBS2Q9BXC9 721 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 CEP44Q9C0F1 390 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 C20orf96Q9NUD7 363 aaPredicted RBP5.56□□□□□ -1.52
EPHA4-202ENST00000409854 INTS9Q9NV88 658 aaKnown RBP5.56□□□□□ -1.52
EPHA4-202ENST00000409854 IL1RAPL1Q9NZN1 696 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 LMCD1Q9NZU5 365 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 SLC2A6Q9UGQ3 507 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 GGT7Q9UJ14 662 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 GGA2Q9UJY4 613 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 FCF1Q9Y324 198 aaKnown RBP5.56□□□□□ -1.52
EPHA4-202ENST00000409854 WNT6Q9Y6F9 365 aa5.56□□□□□ -1.52
EPHA4-202ENST00000409854 TNRC18O15417 2968 aaPredicted RBP5.56□□□□□ -1.52
EPHA4-202ENST00000409854 TM9SF1O15321 606 aa5.55□□□□□ -1.52
EPHA4-202ENST00000409854 LINC01565O15544 149 aa5.55□□□□□ -1.52
EPHA4-202ENST00000409854 HTRA2O43464 458 aaPredicted RBP5.55□□□□□ -1.52
EPHA4-202ENST00000409854 SMAD6O43541 496 aaKnown RBP5.55□□□□□ -1.52
EPHA4-202ENST00000409854 MT-ND3P03897 115 aa5.55□□□□□ -1.52
EPHA4-202ENST00000409854 CYP17A1P05093 508 aa5.55□□□□□ -1.52
EPHA4-202ENST00000409854 ITGA2BP08514 1039 aa5.55□□□□□ -1.52
EPHA4-202ENST00000409854 PABPC1P11940 636 aaKnown RBP5.55□□□□□ -1.52
EPHA4-202ENST00000409854 SRCP12931 536 aa5.55□□□□□ -1.52
EPHA4-202ENST00000409854 MAPK8P45983 427 aa5.55□□□□□ -1.52
EPHA4-202ENST00000409854 WDR4P57081 412 aaKnown RBP5.55□□□□□ -1.52
EPHA4-202ENST00000409854 ADAM15Q13444 863 aa5.55□□□□□ -1.52
EPHA4-202ENST00000409854 GALNT3Q14435 633 aa5.55□□□□□ -1.52
EPHA4-202ENST00000409854 HSP90AA5PQ58FG0 334 aa5.55□□□□□ -1.52
EPHA4-202ENST00000409854 TCEAL5Q5H9L2 206 aa5.55□□□□□ -1.52
EPHA4-202ENST00000409854 KDELC2Q7Z4H8 507 aa5.55□□□□□ -1.52
EPHA4-202ENST00000409854 ADIPOR2Q86V24 386 aa5.55□□□□□ -1.52
EPHA4-202ENST00000409854 BRSK1Q8TDC3 778 aa5.55□□□□□ -1.52
EPHA4-202ENST00000409854 FGF13Q92913 245 aa5.55□□□□□ -1.52
EPHA4-202ENST00000409854 ATP2A3Q93084 1043 aa5.55□□□□□ -1.52
EPHA4-202ENST00000409854 AGAP2Q99490 1192 aa5.55□□□□□ -1.52
EPHA4-202ENST00000409854 EPN3Q9H201 632 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms