RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 C16orf82Q7Z2V1 217 aa4.25□□□□□ -1.73
PMS1-203ENST00000409593 NR2C2APQ86WQ0 139 aa4.25□□□□□ -1.73
PMS1-203ENST00000409593 ZNF354CQ86Y25 554 aa4.25□□□□□ -1.73
PMS1-203ENST00000409593 DOCK7Q96N67 2140 aa4.25□□□□□ -1.73
PMS1-203ENST00000409593 PSMD1Q99460 953 aa4.25□□□□□ -1.73
PMS1-203ENST00000409593 INTS2Q9H0H0 1204 aaKnown RBP4.25□□□□□ -1.73
PMS1-203ENST00000409593 SLC45A1Q9Y2W3 748 aa4.25□□□□□ -1.73
PMS1-203ENST00000409593 NOTCH4Q99466 2003 aa4.24□□□□□ -1.73
PMS1-203ENST00000409593 BTBD18B2RXH4 712 aa4.24□□□□□ -1.73
PMS1-203ENST00000409593 KLRF2D3W0D1 207 aa4.24□□□□□ -1.73
PMS1-203ENST00000409593 CXCR3P49682 368 aa4.24□□□□□ -1.73
PMS1-203ENST00000409593 COMPP49747 757 aaPredicted RBP4.24□□□□□ -1.73
PMS1-203ENST00000409593 GAS1P54826 345 aa4.24□□□□□ -1.73
PMS1-203ENST00000409593 CDH15P55291 814 aa4.24□□□□□ -1.73
PMS1-203ENST00000409593 CLDN2P57739 230 aa4.24□□□□□ -1.73
PMS1-203ENST00000409593 TUBA1BP68363 451 aa4.24□□□□□ -1.73
PMS1-203ENST00000409593 ITGADQ13349 1161 aa4.24□□□□□ -1.73
PMS1-203ENST00000409593 TAF11Q15544 211 aa4.24□□□□□ -1.73
PMS1-203ENST00000409593 XKR9Q5GH70 373 aa4.24□□□□□ -1.73
PMS1-203ENST00000409593 LRRC8EQ6NSJ5 796 aa4.24□□□□□ -1.73
PMS1-203ENST00000409593 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.24□□□□□ -1.73
PMS1-203ENST00000409593 ARMC9Q7Z3E5 817 aa4.24□□□□□ -1.73
PMS1-203ENST00000409593 TADA2BQ86TJ2 420 aa4.24□□□□□ -1.73
PMS1-203ENST00000409593 CPXCR1Q8N123 301 aa4.24□□□□□ -1.73
PMS1-203ENST00000409593 TCP11L2Q8N4U5 519 aa4.24□□□□□ -1.73
PMS1-203ENST00000409593 PLD5Q8N7P1 536 aa4.24□□□□□ -1.73
PMS1-203ENST00000409593 MYRIPQ8NFW9 859 aa4.24□□□□□ -1.73
PMS1-203ENST00000409593 MAELQ96JY0 434 aaKnown RBP4.24□□□□□ -1.73
PMS1-203ENST00000409593 ADGRG7Q96K78 797 aa4.24□□□□□ -1.73
PMS1-203ENST00000409593 SIN3AQ96ST3 1273 aa4.24□□□□□ -1.73
PMS1-203ENST00000409593 TMEM160Q9NX00 188 aa4.24□□□□□ -1.73
PMS1-203ENST00000409593 KIAA1456Q9P272 454 aa4.24□□□□□ -1.73
PMS1-203ENST00000409593 A3GALT2U3KPV4 340 aa4.24□□□□□ -1.73
PMS1-203ENST00000409593 EME2A4GXA9 379 aaPredicted RBP4.23□□□□□ -1.73
PMS1-203ENST00000409593 HNRNPA1P09651 372 aaKnown RBP eCLIP4.23□□□□□ -1.73
PMS1-203ENST00000409593 FMO4P31512 558 aa4.23□□□□□ -1.73
PMS1-203ENST00000409593 NR1H2P55055 460 aa4.23□□□□□ -1.73
PMS1-203ENST00000409593 RPL36AP83881 106 aaKnown RBP4.23□□□□□ -1.73
PMS1-203ENST00000409593 GRSF1Q12849 480 aaKnown RBP eCLIP4.23□□□□□ -1.73
PMS1-203ENST00000409593 MYBPHQ13203 477 aa4.23□□□□□ -1.73
PMS1-203ENST00000409593 TRPC3Q13507 836 aa4.23□□□□□ -1.73
PMS1-203ENST00000409593 SOWAHAQ2M3V2 549 aa4.23□□□□□ -1.73
PMS1-203ENST00000409593 CCDC129Q6ZRS4 1044 aa4.23□□□□□ -1.73
PMS1-203ENST00000409593 NEK10Q6ZWH5 1172 aa4.23□□□□□ -1.73
PMS1-203ENST00000409593 MORC4Q8TE76 937 aa4.23□□□□□ -1.73
PMS1-203ENST00000409593 ERGIC1Q969X5 290 aa4.23□□□□□ -1.73
PMS1-203ENST00000409593 MTBPQ96DY7 904 aa4.23□□□□□ -1.73
PMS1-203ENST00000409593 BBS4Q96RK4 519 aa4.23□□□□□ -1.73
PMS1-203ENST00000409593 PLSCR4Q9NRQ2 329 aa4.23□□□□□ -1.73
PMS1-203ENST00000409593 CISD1Q9NZ45 108 aaKnown RBP4.23□□□□□ -1.73
PMS1-203ENST00000409593 MALT1Q9UDY8 824 aa4.23□□□□□ -1.73
PMS1-203ENST00000409593 CARD8Q9Y2G2 431 aa4.23□□□□□ -1.73
PMS1-203ENST00000409593 GOLGA6L10A0A0M3HER8 536 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 A0A0U1RQF3 1178 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 A0A0U1RQJ8 604 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 hDV102S1A0JD36 115 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 DENND3A2RUS2 1198 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 RRN3P2A6NIE6 340 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 SMTNL1A8MU46 457 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 TEX22C9J3V5 150 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 TPD52L2O43399 206 aaKnown RBP4.22□□□□□ -1.73
PMS1-203ENST00000409593 MTA2O94776 668 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 PPP1R3DO95685 299 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 URODP06132 367 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 GGT5P36269 586 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 PEX5P50542 639 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 EEF1A2Q05639 463 aaKnown RBP4.22□□□□□ -1.73
PMS1-203ENST00000409593 COASYQ13057 564 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 DHX34Q14147 1143 aaKnown RBP4.22□□□□□ -1.73
PMS1-203ENST00000409593 ZNF766Q5HY98 468 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 TMEM81Q6P7N7 255 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 MPHOSPH8Q99549 860 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 MXRA8Q9BRK3 442 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 C1QTNF4Q9BXJ3 329 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 HEMGNQ9BXL5 484 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 IL25Q9H293 177 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 BEX4Q9NWD9 120 aaPredicted RBP4.22□□□□□ -1.73
PMS1-203ENST00000409593 GGA3Q9NZ52 723 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 IFITM10A6NMD0 228 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 BCAT2O15382 392 aaPredicted RBP4.22□□□□□ -1.73
PMS1-203ENST00000409593 TACC1O75410 805 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 AFPP02771 609 aaKnown RBP4.22□□□□□ -1.73
PMS1-203ENST00000409593 GALTP07902 379 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 SSTR2P30874 369 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 KRTAP10-7P60409 375 aaPredicted RBP4.22□□□□□ -1.73
PMS1-203ENST00000409593 RPP30P78346 268 aaKnown RBP4.22□□□□□ -1.73
PMS1-203ENST00000409593 TLE2Q04725 743 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 SNTA1Q13424 505 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 SF3B4Q15427 424 aaKnown RBP eCLIP4.22□□□□□ -1.73
PMS1-203ENST00000409593 GPR68Q15743 365 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 SPSB3Q6PJ21 355 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 RRM2BQ7LG56 351 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 PGBD5Q8N414 524 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 LILRB1Q8NHL6 650 aaPredicted RBP4.22□□□□□ -1.73
PMS1-203ENST00000409593 USP13Q92995 863 aaPredicted RBP4.22□□□□□ -1.73
PMS1-203ENST00000409593 KIF1BPQ96EK5 621 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 IGSF21Q96ID5 467 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 LRFN5Q96NI6 719 aa4.22□□□□□ -1.73
PMS1-203ENST00000409593 MMTAG2Q9BU76 263 aaKnown RBP4.22□□□□□ -1.73
PMS1-203ENST00000409593 RETREG1Q9H6L5 497 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms