RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 LEKR1Q6ZMV7 388 aa17.1■□□□□ 0.33
SCRN1-203ENST00000409570 VASH2Q86V25 355 aa17.1■□□□□ 0.33
SCRN1-203ENST00000409570 CXorf40AQ8TE69 158 aa17.1■□□□□ 0.33
SCRN1-203ENST00000409570 C18orf8Q96DM3 657 aa17.1■□□□□ 0.33
SCRN1-203ENST00000409570 CFAP57Q96MR6 1250 aa17.1■□□□□ 0.33
SCRN1-203ENST00000409570 SIX2Q9NPC8 291 aa17.1■□□□□ 0.33
SCRN1-203ENST00000409570 CHMP5Q9NZZ3 219 aa17.1■□□□□ 0.33
SCRN1-203ENST00000409570 PRAMEF33A0A0G2JMD5 474 aa17.09■□□□□ 0.33
SCRN1-203ENST00000409570 FAM170AA1A519 330 aa17.09■□□□□ 0.33
SCRN1-203ENST00000409570 PRAMEF10O60809 474 aa17.09■□□□□ 0.33
SCRN1-203ENST00000409570 SFTPCP11686 197 aa17.09■□□□□ 0.33
SCRN1-203ENST00000409570 ETFBP38117 255 aa17.09■□□□□ 0.33
SCRN1-203ENST00000409570 PEX5P50542 639 aa17.09■□□□□ 0.33
SCRN1-203ENST00000409570 GEMIN4P57678 1058 aaKnown RBP17.09■□□□□ 0.33
SCRN1-203ENST00000409570 ZFP36L1Q07352 338 aaKnown RBP17.09■□□□□ 0.33
SCRN1-203ENST00000409570 MANEALQ5VSG8 457 aa17.09■□□□□ 0.33
SCRN1-203ENST00000409570 NLRP14Q86W24 1093 aa17.09■□□□□ 0.33
SCRN1-203ENST00000409570 ZFAND4Q86XD8 727 aa17.09■□□□□ 0.33
SCRN1-203ENST00000409570 GKN2Q86XP6 184 aa17.09■□□□□ 0.33
SCRN1-203ENST00000409570 TMEM35BQ8NCS4 154 aa17.09■□□□□ 0.33
SCRN1-203ENST00000409570 HTR3CQ8WXA8 447 aa17.09■□□□□ 0.33
SCRN1-203ENST00000409570 WRAP53Q9BUR4 548 aaKnown RBP17.09■□□□□ 0.33
SCRN1-203ENST00000409570 SEPT10Q9P0V9 454 aa17.09■□□□□ 0.33
SCRN1-203ENST00000409570 DNAI1Q9UI46 699 aa17.09■□□□□ 0.33
SCRN1-203ENST00000409570 TMEM59LQ9UK28 342 aa17.09■□□□□ 0.33
SCRN1-203ENST00000409570 DNAJC12Q9UKB3 198 aa17.09■□□□□ 0.33
SCRN1-203ENST00000409570 COQ6Q9Y2Z9 468 aa17.09■□□□□ 0.33
SCRN1-203ENST00000409570 RELNP78509 3460 aa17.08■□□□□ 0.33
SCRN1-203ENST00000409570 GTPBP10A4D1E9 387 aaKnown RBP17.08■□□□□ 0.32
SCRN1-203ENST00000409570 AGRPO00253 132 aa17.08■□□□□ 0.32
SCRN1-203ENST00000409570 RASGRP1O95267 797 aa17.08■□□□□ 0.32
SCRN1-203ENST00000409570 FGFR1OPO95684 399 aaKnown RBP17.08■□□□□ 0.32
SCRN1-203ENST00000409570 TIMP2P16035 220 aa17.08■□□□□ 0.32
SCRN1-203ENST00000409570 MAPKAPK2P49137 400 aa17.08■□□□□ 0.32
SCRN1-203ENST00000409570 NRG1Q02297 640 aaPredicted RBP17.08■□□□□ 0.32
SCRN1-203ENST00000409570 WSCD2Q2TBF2 565 aa17.08■□□□□ 0.32
SCRN1-203ENST00000409570 TMEM52BQ4KMG9 183 aa17.08■□□□□ 0.32
SCRN1-203ENST00000409570 RAB6CQ53S08 254 aa17.08■□□□□ 0.32
SCRN1-203ENST00000409570 C2CD6Q53TS8 623 aa17.08■□□□□ 0.32
SCRN1-203ENST00000409570 ENPP7Q6UWV6 458 aa17.08■□□□□ 0.32
SCRN1-203ENST00000409570 ZNF574Q6ZN55 896 aaPredicted RBP17.08■□□□□ 0.32
SCRN1-203ENST00000409570 RD3Q7Z3Z2 195 aa17.08■□□□□ 0.32
SCRN1-203ENST00000409570 DTX1Q86Y01 620 aa17.08■□□□□ 0.32
SCRN1-203ENST00000409570 CCNJLQ8IV13 435 aa17.08■□□□□ 0.32
SCRN1-203ENST00000409570 FAM71AQ8IYT1 594 aa17.08■□□□□ 0.32
SCRN1-203ENST00000409570 GPR156Q8NFN8 814 aa17.08■□□□□ 0.32
SCRN1-203ENST00000409570 OR6C4Q8NGE1 309 aa17.08■□□□□ 0.32
SCRN1-203ENST00000409570 RAB6CQ9H0N0 254 aa17.08■□□□□ 0.32
SCRN1-203ENST00000409570 MAGEH1Q9H213 219 aa17.08■□□□□ 0.32
SCRN1-203ENST00000409570 FOXJ2Q9P0K8 574 aa17.08■□□□□ 0.32
SCRN1-203ENST00000409570 NEU3Q9UQ49 428 aa17.08■□□□□ 0.32
SCRN1-203ENST00000409570 TMEM110-MUSTN1A8MSY1 372 aa17.07■□□□□ 0.32
SCRN1-203ENST00000409570 GOLGA8SH3BPF8 625 aa17.07■□□□□ 0.32
SCRN1-203ENST00000409570 RHOQP17081 205 aa17.07■□□□□ 0.32
SCRN1-203ENST00000409570 SRP54P61011 504 aaKnown RBP17.07■□□□□ 0.32
SCRN1-203ENST00000409570 CYP4F2P78329 520 aa17.07■□□□□ 0.32
SCRN1-203ENST00000409570 NFATC4Q14934 902 aa17.07■□□□□ 0.32
SCRN1-203ENST00000409570 LRRC14Q15048 493 aa17.07■□□□□ 0.32
SCRN1-203ENST00000409570 KCTD16Q68DU8 428 aa17.07■□□□□ 0.32
SCRN1-203ENST00000409570 CREBRFQ8IUR6 639 aa17.07■□□□□ 0.32
SCRN1-203ENST00000409570 Q8N9G6 341 aaPredicted RBP17.07■□□□□ 0.32
SCRN1-203ENST00000409570 USP7Q93009 1102 aa17.07■□□□□ 0.32
SCRN1-203ENST00000409570 FUCA2Q9BTY2 467 aa17.07■□□□□ 0.32
SCRN1-203ENST00000409570 APOOQ9BUR5 198 aa17.07■□□□□ 0.32
SCRN1-203ENST00000409570 MAGEB5Q9BZ81 275 aa17.07■□□□□ 0.32
SCRN1-203ENST00000409570 TMEM248Q9NWD8 314 aa17.07■□□□□ 0.32
SCRN1-203ENST00000409570 DKK3Q9UBP4 350 aa17.07■□□□□ 0.32
SCRN1-203ENST00000409570 OR12D3Q9UGF7 316 aa17.07■□□□□ 0.32
SCRN1-203ENST00000409570 APPL1Q9UKG1 709 aa17.07■□□□□ 0.32
SCRN1-203ENST00000409570 HPCAL4Q9UM19 191 aa17.07■□□□□ 0.32
SCRN1-203ENST00000409570 C9orf172C9J069 976 aa17.06■□□□□ 0.32
SCRN1-203ENST00000409570 FAM72CH0Y354 149 aa17.06■□□□□ 0.32
SCRN1-203ENST00000409570 KDELR3O43731 214 aa17.06■□□□□ 0.32
SCRN1-203ENST00000409570 PPFIA2O75334 1257 aa17.06■□□□□ 0.32
SCRN1-203ENST00000409570 TMCC1O94876 653 aa17.06■□□□□ 0.32
SCRN1-203ENST00000409570 CLCA4Q14CN2 919 aa17.06■□□□□ 0.32
SCRN1-203ENST00000409570 FAM72AQ5TYM5 149 aa17.06■□□□□ 0.32
SCRN1-203ENST00000409570 FAM72DQ6L9T8 149 aa17.06■□□□□ 0.32
SCRN1-203ENST00000409570 RWDD4Q6NW29 188 aaKnown RBP17.06■□□□□ 0.32
SCRN1-203ENST00000409570 TMPRSS9Q7Z410 1059 aa17.06■□□□□ 0.32
SCRN1-203ENST00000409570 FAM72BQ86X60 149 aa17.06■□□□□ 0.32
SCRN1-203ENST00000409570 LURAP1LQ8IV03 231 aa17.06■□□□□ 0.32
SCRN1-203ENST00000409570 SLITRK4Q8IW52 837 aa17.06■□□□□ 0.32
SCRN1-203ENST00000409570 ZSCAN1Q8NBB4 408 aa17.06■□□□□ 0.32
SCRN1-203ENST00000409570 NETO2Q8NC67 525 aa17.06■□□□□ 0.32
SCRN1-203ENST00000409570 TMEM159Q96B96 161 aa17.06■□□□□ 0.32
SCRN1-203ENST00000409570 GDAP1L1Q96MZ0 367 aa17.06■□□□□ 0.32
SCRN1-203ENST00000409570 RBM15Q96T37 977 aaKnown RBP eCLIP17.06■□□□□ 0.323e-6■■■■□ 20.7
SCRN1-203ENST00000409570 TTYH3Q9C0H2 523 aa17.06■□□□□ 0.32
SCRN1-203ENST00000409570 PDCL3Q9H2J4 239 aa17.06■□□□□ 0.32
SCRN1-203ENST00000409570 RETREG1Q9H6L5 497 aa17.06■□□□□ 0.32
SCRN1-203ENST00000409570 GEMIN8Q9NWZ8 242 aaKnown RBP17.06■□□□□ 0.32
SCRN1-203ENST00000409570 KLQ9UEF7 1012 aa17.06■□□□□ 0.32
SCRN1-203ENST00000409570 A0A1W2PQC6 194 aa17.05■□□□□ 0.32
SCRN1-203ENST00000409570 RAMP2O60895 175 aa17.05■□□□□ 0.32
SCRN1-203ENST00000409570 GLB1P16278 677 aa17.05■□□□□ 0.32
SCRN1-203ENST00000409570 HTR1BP28222 390 aa17.05■□□□□ 0.32
SCRN1-203ENST00000409570 ADRA1BP35368 520 aa17.05■□□□□ 0.32
SCRN1-203ENST00000409570 MAPK10P53779 464 aa17.05■□□□□ 0.32
SCRN1-203ENST00000409570 BPIFB4P59827 614 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms