RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 C17orf99Q6UX52 265 aa13.08□□□□□ -0.32
PTPRN-202ENST00000409251 TTC30AQ86WT1 665 aa13.08□□□□□ -0.32
PTPRN-202ENST00000409251 FIBCD1Q8N539 461 aa13.08□□□□□ -0.32
PTPRN-202ENST00000409251 RNF186Q9NXI6 227 aa13.08□□□□□ -0.32
PTPRN-202ENST00000409251 ZDHHC2Q9UIJ5 367 aa13.08□□□□□ -0.32
PTPRN-202ENST00000409251 CORINQ9Y5Q5 1042 aa13.08□□□□□ -0.32
PTPRN-202ENST00000409251 PMM2O15305 246 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 CHADO15335 359 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 PPARGP37231 505 aaPredicted RBP13.07□□□□□ -0.32
PTPRN-202ENST00000409251 GSTM4Q03013 218 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 CACNB2Q08289 660 aaPredicted RBP13.07□□□□□ -0.32
PTPRN-202ENST00000409251 SOWAHAQ2M3V2 549 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 MORN1Q5T089 497 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 METTL21CQ5VZV1 264 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 NANOGP8Q6NSW7 305 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 CCDC81Q6ZN84 652 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 KCTD8Q6ZWB6 473 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 KBTBD7Q8WVZ9 684 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 TSR3Q9UJK0 312 aaKnown RBP13.07□□□□□ -0.32
PTPRN-202ENST00000409251 WDR37Q9Y2I8 494 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 DICER1Q9UPY3 1922 aaKnown RBP13.07□□□□□ -0.32
PTPRN-202ENST00000409251 NR5A2O00482 541 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 TGM2P21980 687 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 SEPHS1P49903 392 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 PITX1P78337 314 aaPredicted RBP13.07□□□□□ -0.32
PTPRN-202ENST00000409251 FPGSQ05932 587 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 KCNA10Q16322 511 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 FBXO47Q5MNV8 452 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 LRRC38Q5VT99 294 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 ZNF280DQ6N043 979 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 CCDC80Q76M96 950 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 PCDH19Q8TAB3 1148 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 SNRNP25Q9BV90 132 aaKnown RBP13.07□□□□□ -0.32
PTPRN-202ENST00000409251 ATXN3LQ9H3M9 355 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 STN1Q9H668 368 aaKnown RBP13.07□□□□□ -0.32
PTPRN-202ENST00000409251 SPC25Q9HBM1 224 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 SLC38A7Q9NVC3 462 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 EXD2Q9NVH0 621 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 PPME1Q9Y570 386 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 A0A087WXM4 84 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 PSMD11O00231 422 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 MATN2O00339 956 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 BIRC5O15392 142 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 MED7O43513 233 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 NRP2O60462 931 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 C2P06681 752 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 AKR1A1P14550 325 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 NCK1P16333 377 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 PURAQ00577 322 aaKnown RBP13.07□□□□□ -0.32
PTPRN-202ENST00000409251 PPP1R3AQ16821 1122 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 SLC2A7Q6PXP3 512 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 DCDC5Q6ZRR9 648 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 BTLAQ7Z6A9 289 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 CROCCP3Q8IVE0 287 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 BORCS5Q969J3 196 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 HDAC11Q96DB2 347 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 FRMD8Q9BZ67 464 aaPredicted RBP13.07□□□□□ -0.32
PTPRN-202ENST00000409251 ZNF696Q9H7X3 374 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 DNAJC28Q9NX36 388 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 SORCS3Q9UPU3 1222 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 GPC6Q9Y625 555 aaPredicted RBP13.07□□□□□ -0.32
PTPRN-202ENST00000409251 C5orf42Q9H799 3197 aa13.07□□□□□ -0.32
PTPRN-202ENST00000409251 HEATR9A2RTY3 570 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 TMEM221A6NGB7 291 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 RRN3P2A6NIE6 340 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 C3orf70A6NLC5 250 aaPredicted RBP13.06□□□□□ -0.32
PTPRN-202ENST00000409251 HUS1O60921 280 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 B3GAT3O94766 335 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 TCEA1P23193 301 aaKnown RBP13.06□□□□□ -0.32
PTPRN-202ENST00000409251 PBX3P40426 434 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 BRCC3P46736 316 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 HSPA13P48723 471 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 AP3M2P53677 418 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 ATN1P54259 1190 aaPredicted RBP13.06□□□□□ -0.32
PTPRN-202ENST00000409251 ZFP1Q6P2D0 407 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 FAM35AQ86V20 835 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 XYLT1Q86Y38 959 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 SLC15A3Q8IY34 581 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.06□□□□□ -0.32
PTPRN-202ENST00000409251 GTF3C2Q8WUA4 911 aaPredicted RBP13.06□□□□□ -0.32
PTPRN-202ENST00000409251 SIGLEC10Q96LC7 697 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 ACE2Q9BYF1 805 aaPredicted RBP13.06□□□□□ -0.32
PTPRN-202ENST00000409251 ASB7Q9H672 318 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 SIAEQ9HAT2 523 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 MIOSQ9NXC5 875 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 FNDC3AQ9Y2H6 1198 aaKnown RBP13.06□□□□□ -0.32
PTPRN-202ENST00000409251 SLC27A5Q9Y2P5 690 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 PRG3Q9Y2Y8 225 aaPredicted RBP13.06□□□□□ -0.32
PTPRN-202ENST00000409251 CEP290O15078 2479 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 HDAC3O15379 428 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 SERPINB7O75635 380 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 BEST1O76090 585 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 ADSLP30566 484 aaPredicted RBP13.06□□□□□ -0.32
PTPRN-202ENST00000409251 GPD2P43304 727 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 CXCR3P49682 368 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 RPL14P50914 215 aaKnown RBP13.06□□□□□ -0.32
PTPRN-202ENST00000409251 CLCNKBP51801 687 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 SLC12A2P55011 1212 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 MAP3K7CLP57077 242 aa13.06□□□□□ -0.32
PTPRN-202ENST00000409251 FKBP1BP68106 108 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms