RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 TPP2P29144 1249 aaPredicted RBP8.39□□□□□ -1.07
SNX13-201ENST00000409076 ITGADQ13349 1161 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 REP15Q6BDI9 236 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 NAPEPLDQ6IQ20 393 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 SH2D5Q6ZV89 423 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 RIOX2Q8IUF8 465 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 ABI1Q8IZP0 508 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 CDYL2Q8N8U2 506 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 RPRD1AQ96P16 312 aaPredicted RBP8.39□□□□□ -1.07
SNX13-201ENST00000409076 EFHD1Q9BUP0 239 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 RGS18Q9NS28 235 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 RAP2CQ9Y3L5 183 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 ASCC3Q8N3C0 2202 aaKnown RBP8.39□□□□□ -1.07
SNX13-201ENST00000409076 IQCF5A8MTL0 148 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 G3V2L1 256 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 M0QZ92 97 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 PIGRP01833 764 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 GSNP06396 782 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 GRK4P32298 578 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 CD68P34810 354 aaPredicted RBP8.38□□□□□ -1.07
SNX13-201ENST00000409076 LILRA4P59901 499 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 GTF2H3Q13889 308 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 DPYSL2Q16555 572 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 AP5B1Q2VPB7 878 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 SLC25A52Q3SY17 297 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 CCDC153Q494R4 210 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 SPANXN3Q5MJ09 141 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 RAP1GAP2Q684P5 730 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 FAM117BQ6P1L5 589 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 CXCL17Q6UXB2 119 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 CLEC20AQ6ZU45 233 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 C16orf59Q7L2K0 433 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 OR13C4Q8NGS5 318 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 ZNF560Q96MR9 790 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 PLEKHG4BQ96PX9 1271 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 SSU72Q9NP77 194 aaKnown RBP8.38□□□□□ -1.07
SNX13-201ENST00000409076 SMPD4Q9NXE4 827 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 RRN3Q9NYV6 651 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 MOCS1Q9NZB8 636 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 MORF4L1Q9UBU8 362 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 ZNF180Q9UJW8 692 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 CNTN6Q9UQ52 1028 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 PRORSD1PA6NEY8 169 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 J3KR12 359 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 ABCD1P33897 745 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 RAB10P61026 200 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 YBX1P67809 324 aaKnown RBP8.38□□□□□ -1.07
SNX13-201ENST00000409076 TBC1D25Q3MII6 688 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 ZRANB3Q5FWF4 1079 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 ARMC12Q5T9G4 340 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 EPGNQ6UW88 154 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 GALNT5Q7Z7M9 940 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 GIPC3Q8TF64 312 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 JADE3Q92613 823 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 MYLPFQ96A32 169 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 COLEC11Q9BWP8 271 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 TMEM30AQ9NV96 361 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 MAP3K20Q9NYL2 800 aaKnown RBP8.38□□□□□ -1.07
SNX13-201ENST00000409076 LMCD1Q9NZU5 365 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 ARL5AQ9Y689 179 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 COL5A3P25940 1745 aaPredicted RBP8.38□□□□□ -1.07
SNX13-201ENST00000409076 CCL15-CCL14A0A0B4J2E2 113 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 C7orf72A4D263 438 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 I6L893 689 aaPredicted RBP8.38□□□□□ -1.07
SNX13-201ENST00000409076 EI24O14681 340 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 GMNNO75496 209 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 TRMUO75648 421 aaKnown RBP8.38□□□□□ -1.07
SNX13-201ENST00000409076 TFAP2AP05549 437 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 SMPD1P17405 629 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 TPSB2P20231 275 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 NOS2P35228 1153 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 PGFP49763 221 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 NDST2P52849 883 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 DIO3P55073 304 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 MTTPP55157 894 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 FOXA1P55317 472 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 OCA2Q04671 838 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 TUBB3Q13509 450 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 DDX39BQ13838 428 aaKnown RBP8.38□□□□□ -1.07
SNX13-201ENST00000409076 GRB7Q14451 532 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 TPSAB1Q15661 275 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 PSMD5Q16401 504 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 CCL15Q16663 113 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 GSTA3Q16772 222 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 AAK1Q2M2I8 961 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 SHCBP1Q8NEM2 672 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 GIPC2Q8TF65 315 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 ANKRD49Q8WVL7 239 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 PBXIP1Q96AQ6 731 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 FCRL2Q96LA5 508 aaPredicted RBP8.38□□□□□ -1.07
SNX13-201ENST00000409076 EGFL8Q99944 293 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 RTKNQ9BST9 563 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 THUMPD3Q9BV44 507 aaKnown RBP8.38□□□□□ -1.07
SNX13-201ENST00000409076 ROGDIQ9GZN7 287 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 STK39Q9UEW8 545 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 ZNHIT2Q9UHR6 403 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 OAZ3Q9UMX2 235 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 SH3BP1Q9Y3L3 701 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 IPPQ9Y573 584 aa8.38□□□□□ -1.07
SNX13-201ENST00000409076 RAD54BQ9Y620 910 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms