RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 LCN1P1Q5VSP4 162 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 GJB7Q6PEY0 223 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 DRICH1Q6PGQ1 229 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-203ENST00000409050 MPP5Q8N3R9 675 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 LRRC71Q8N4P6 559 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 CHCHD4Q8N4Q1 142 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 C12orf50Q8NA57 414 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-203ENST00000409050 ANKRD52Q8NB46 1076 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 CSGALNACT1Q8TDX6 532 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 DCAKDQ8WVC6 231 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 TBC1D10AQ9BXI6 508 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 RTFDC1Q9BY42 306 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-203ENST00000409050 DEFB129Q9H1M3 183 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 DSN1Q9H410 356 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 PTPRMP28827 1452 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 CEP152O94986 1710 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 GRIN2DO15399 1336 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 OR6C75A6NL08 312 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 TRMUO75648 421 aaKnown RBP6.14□□□□□ -1.43
SCN1A-203ENST00000409050 POMCP01189 267 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 LYNP07948 512 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 TNNI3P19429 210 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 GLRBP48167 497 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 ARFIP1P53367 373 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 INHBEP58166 350 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 MVKQ03426 396 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 PTAR1Q7Z6K3 402 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-203ENST00000409050 ZZZ3Q8IYH5 903 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 PGAM4Q8N0Y7 254 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 SMYD1Q8NB12 490 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 EPS8L1Q8TE68 723 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 C12orf66Q96MD2 445 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 MBOAT7Q96N66 472 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 MTMR9Q96QG7 549 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 VPS35Q96QK1 796 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 OSGEPQ9NPF4 335 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 EIF2B3Q9NR50 452 aaKnown RBP6.14□□□□□ -1.43
SCN1A-203ENST00000409050 ARL15Q9NXU5 204 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 PTTG2Q9NZH5 202 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 PTGFRNQ9P2B2 879 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 PCDH10Q9P2E7 1040 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 ZNF214Q9UL59 606 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-203ENST00000409050 PCDHGB1Q9Y5G3 927 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 KCNE2Q9Y6J6 123 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 V9GYQ6 96 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 CNTNAP2Q9UHC6 1331 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 SUV39H1O43463 412 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 VAPBO95292 243 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 APOC1P02654 83 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 FGBP02675 491 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 THRBP10828 461 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 PRPS2P11908 318 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 PIK3CBP42338 1070 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 SCNN1BP51168 640 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 PITPNAQ00169 270 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 PLCL1Q15111 1095 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 TEAD4Q15561 434 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 ZNF621Q6ZSS3 439 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 THAP5Q7Z6K1 395 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 ARMC8Q8IUR7 673 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 TMEM126BQ8IUX1 230 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 TMEM192Q8IY95 271 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 CLP1Q92989 425 aaKnown RBP6.14□□□□□ -1.43
SCN1A-203ENST00000409050 MNTQ99583 582 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 APOL2Q9BQE5 337 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 ZYG11BQ9C0D3 744 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 NXF3Q9H4D5 531 aaKnown RBP6.14□□□□□ -1.43
SCN1A-203ENST00000409050 PAK6Q9NQU5 681 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-203ENST00000409050 A0A1W2PQ72 361 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 A0A1W2PRG6 482 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 FAM196BA6NMK8 535 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 PDCD5O14737 125 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 ADAMDEC1O15204 470 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 TRUB2O95900 331 aaKnown RBP6.13□□□□□ -1.43
SCN1A-203ENST00000409050 AMHP03971 560 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 GYS1P13807 737 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 OMPP47874 163 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 SLC12A3P55017 1021 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 SCN1BQ07699 218 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 OTUD3Q5T2D3 398 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-203ENST00000409050 FAXCQ5TGI0 409 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 PLET1Q6UQ28 207 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 RPTNQ6XPR3 784 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 RAB43Q86YS6 212 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 POC5Q8NA72 575 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 ZNF540Q8NDQ6 660 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 UBASH3BQ8TF42 649 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 PNMA5Q96PV4 448 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 HTATIP2Q9BUP3 242 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 ST6GALNAC4Q9H4F1 302 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 KLHL1Q9NR64 748 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 TAS2R7Q9NYW3 318 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 NUDT4Q9NZJ9 180 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 STOX2Q9P2F5 926 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-203ENST00000409050 CKLFQ9UBR5 152 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 TSR3Q9UJK0 312 aaKnown RBP6.13□□□□□ -1.43
SCN1A-203ENST00000409050 ARHGEF33A8MVX0 844 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 DHX15O43143 795 aaKnown RBP6.13□□□□□ -1.43
SCN1A-203ENST00000409050 TMCC2O75069 709 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 TSPAN9O75954 239 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms