RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 HMBSP08397 361 aa17.78■□□□□ 0.44
SMPD4-202ENST00000409031 IL1R1P14778 569 aa17.78■□□□□ 0.44
SMPD4-202ENST00000409031 PHC1P78364 1004 aa17.78■□□□□ 0.44
SMPD4-202ENST00000409031 REP15Q6BDI9 236 aa17.78■□□□□ 0.44
SMPD4-202ENST00000409031 ZYG11AQ6WRX3 759 aa17.78■□□□□ 0.44
SMPD4-202ENST00000409031 MARVELD2Q8N4S9 558 aa17.78■□□□□ 0.44
SMPD4-202ENST00000409031 TOP1MTQ969P6 601 aa17.78■□□□□ 0.44
SMPD4-202ENST00000409031 FBXL8Q96CD0 374 aa17.78■□□□□ 0.44
SMPD4-202ENST00000409031 REXO5Q96IC2 774 aaKnown RBP17.78■□□□□ 0.44
SMPD4-202ENST00000409031 TMEM134Q9H6X4 195 aa17.78■□□□□ 0.44
SMPD4-202ENST00000409031 CLN6Q9NWW5 311 aa17.78■□□□□ 0.44
SMPD4-202ENST00000409031 SFMBT1Q9UHJ3 866 aa17.78■□□□□ 0.44
SMPD4-202ENST00000409031 KRT87PA6NCN2 255 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 TRIM64CA6NLI5 447 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 AQP12BA6NM10 295 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 ASS1P00966 412 aaKnown RBP17.77■□□□□ 0.44
SMPD4-202ENST00000409031 WARSP23381 471 aaKnown RBP17.77■□□□□ 0.44
SMPD4-202ENST00000409031 ANXA11P50995 505 aaKnown RBP17.77■□□□□ 0.44
SMPD4-202ENST00000409031 LIMK2P53671 638 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 MPP1Q00013 466 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 C5orf22Q49AR2 442 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 ZC3H12AQ5D1E8 599 aaKnown RBP17.77■□□□□ 0.44
SMPD4-202ENST00000409031 PPM1JQ5JR12 505 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 AQP12AQ8IXF9 295 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 CPSF7Q8N684 471 aaKnown RBP17.77■□□□□ 0.44
SMPD4-202ENST00000409031 RPRD1AQ96P16 312 aaPredicted RBP17.77■□□□□ 0.44
SMPD4-202ENST00000409031 LHX5Q9H2C1 402 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 KAT8Q9H7Z6 458 aaKnown RBP17.77■□□□□ 0.44
SMPD4-202ENST00000409031 PLK4O00444 970 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 ACKR2O00590 384 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 DLDP09622 509 aaKnown RBP17.77■□□□□ 0.44
SMPD4-202ENST00000409031 CKMT2P17540 419 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 C11orf88Q6PI97 169 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 XKR5Q6UX68 686 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 GCNT7Q6ZNI0 430 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 FAM183BPQ6ZVS7 135 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 KRT74Q7RTS7 529 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 EPHX4Q8IUS5 362 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 ADGRF2Q8IZF7 708 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 CAMKK1Q8N5S9 505 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 PPP3R2Q96LZ3 170 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 WDR18Q9BV38 432 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 SAMHD1Q9Y3Z3 626 aaKnown RBP17.77■□□□□ 0.44
SMPD4-202ENST00000409031 M0QX08 132 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 EPN2O95208 641 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 GSTM1P09488 218 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 GRK3P35626 688 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 CLCN3P51790 818 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 SLC16A1P53985 500 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 CDH15P55291 814 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 SLC18A2Q05940 514 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 ZSWIM7Q19AV6 140 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 FAM182BQ5T319 152 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 NT5DC4Q86YG4 428 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 GPSM1Q86YR5 675 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 UNC5BQ8IZJ1 945 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 OR2T12Q8NG77 320 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 Q96MT0 163 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 MTFR1LQ9H019 292 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 ATXN3LQ9H3M9 355 aa17.77■□□□□ 0.44
SMPD4-202ENST00000409031 STX11O75558 287 aa17.77■□□□□ 0.43
SMPD4-202ENST00000409031 FADS2O95864 444 aaKnown RBP17.77■□□□□ 0.43
SMPD4-202ENST00000409031 MYL3P08590 195 aa17.77■□□□□ 0.43
SMPD4-202ENST00000409031 POLD2P49005 469 aa17.77■□□□□ 0.43
SMPD4-202ENST00000409031 ADIGQ0VDE8 80 aa17.77■□□□□ 0.43
SMPD4-202ENST00000409031 TIGD2Q4W5G0 525 aa17.77■□□□□ 0.43
SMPD4-202ENST00000409031 LIN28AQ9H9Z2 209 aaKnown RBP17.77■□□□□ 0.43
SMPD4-202ENST00000409031 DDTLA6NHG4 134 aaPredicted RBP17.76■□□□□ 0.43
SMPD4-202ENST00000409031 BCKDKO14874 412 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 TULP3O75386 442 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 MTHFRP42898 656 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 C11orf91Q3C1V1 193 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 IQSEC1Q6DN90 963 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 TMCO6Q96DC7 493 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 LGMNQ99538 433 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 SDCBP2Q9H190 292 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 LMCD1Q9NZU5 365 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 PSMD11O00231 422 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 FBP2O00757 339 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 NOS1APO75052 506 aaPredicted RBP17.76■□□□□ 0.43
SMPD4-202ENST00000409031 UGT2B4P06133 528 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 SERPINF2P08697 491 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 NOS2P35228 1153 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 SRP54P61011 504 aaKnown RBP17.76■□□□□ 0.43
SMPD4-202ENST00000409031 FBXO47Q5MNV8 452 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 TUBA3EQ6PEY2 450 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 ZNF621Q6ZSS3 439 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 SLC44A2Q8IWA5 706 aaPredicted RBP17.76■□□□□ 0.43
SMPD4-202ENST00000409031 PLD5Q8N7P1 536 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 SLC4A11Q8NBS3 891 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 PIK3R3Q92569 461 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 CRYL1Q9Y2S2 319 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 TYROBPO43914 113 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 TAL1P17542 331 aaPredicted RBP17.76■□□□□ 0.43
SMPD4-202ENST00000409031 DSG3P32926 999 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 NNMTP40261 264 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 TUBA1BP68363 451 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 SCN1BQ07699 218 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 CA9Q16790 459 aa17.76■□□□□ 0.43
SMPD4-202ENST00000409031 IL23RQ5VWK5 629 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms