RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 ZMPSTE24O75844 475 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 DCTN3O75935 186 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 PRKCGP05129 697 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 SCTRP47872 440 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 CSRP3P50461 194 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 PRAMEP78395 509 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 SETDB1Q15047 1291 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 SLC41A1Q8IVJ1 513 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 MFN1Q8IWA4 741 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 LMNTD2Q8IXW0 634 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 PLD6Q8N2A8 252 aaKnown RBP19.1■□□□□ 0.65
USP39-202ENST00000409025 FITM2Q8N6M3 262 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 TDRD5Q8NAT2 981 aaKnown RBP19.1■□□□□ 0.65
USP39-202ENST00000409025 SPPL3Q8TCT6 385 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 BRSK1Q8TDC3 778 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 DDI1Q8WTU0 396 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 MFSD1Q9H3U5 465 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 ZNF358Q9NW07 568 aa19.1■□□□□ 0.65
USP39-202ENST00000409025 TMCC1O94876 653 aa19.09■□□□□ 0.65
USP39-202ENST00000409025 UBOX5O94941 541 aa19.09■□□□□ 0.65
USP39-202ENST00000409025 GMPRP36959 345 aa19.09■□□□□ 0.65
USP39-202ENST00000409025 CSKP41240 450 aa19.09■□□□□ 0.65
USP39-202ENST00000409025 MAGEA9P43362 315 aa19.09■□□□□ 0.65
USP39-202ENST00000409025 CLCN4P51793 760 aa19.09■□□□□ 0.65
USP39-202ENST00000409025 IRF9Q00978 393 aa19.09■□□□□ 0.65
USP39-202ENST00000409025 SLC12A1Q13621 1099 aa19.09■□□□□ 0.65
USP39-202ENST00000409025 PCLAFQ15004 111 aa19.09■□□□□ 0.65
USP39-202ENST00000409025 INO80DQ53TQ3 878 aaPredicted RBP19.09■□□□□ 0.65
USP39-202ENST00000409025 LINGO4Q6UY18 593 aa19.09■□□□□ 0.65
USP39-202ENST00000409025 CCDC91Q7Z6B0 441 aa19.09■□□□□ 0.65
USP39-202ENST00000409025 LCA5Q86VQ0 697 aa19.09■□□□□ 0.65
USP39-202ENST00000409025 OR6P1Q8NGX9 317 aa19.09■□□□□ 0.65
USP39-202ENST00000409025 RFWD2Q8NHY2 731 aa19.09■□□□□ 0.65
USP39-202ENST00000409025 MICAL1Q8TDZ2 1067 aa19.09■□□□□ 0.65
USP39-202ENST00000409025 HDAC10Q969S8 669 aa19.09■□□□□ 0.65
USP39-202ENST00000409025 COPG2Q9UBF2 871 aa19.09■□□□□ 0.65
USP39-202ENST00000409025 DCTN4Q9UJW0 460 aa19.09■□□□□ 0.65
USP39-202ENST00000409025 CHKBQ9Y259 395 aa19.09■□□□□ 0.65
USP39-202ENST00000409025 OR51B4Q9Y5P0 310 aa19.09■□□□□ 0.65
USP39-202ENST00000409025 MTCL1Q9Y4B5 1905 aaKnown RBP19.08■□□□□ 0.65
USP39-202ENST00000409025 SNNO75324 88 aaPredicted RBP19.08■□□□□ 0.65
USP39-202ENST00000409025 HAUS5O94927 633 aa19.08■□□□□ 0.65
USP39-202ENST00000409025 FGF19O95750 216 aa19.08■□□□□ 0.65
USP39-202ENST00000409025 CD160O95971 181 aa19.08■□□□□ 0.65
USP39-202ENST00000409025 CPA3P15088 417 aa19.08■□□□□ 0.65
USP39-202ENST00000409025 KCNA4P22459 653 aa19.08■□□□□ 0.65
USP39-202ENST00000409025 DNAJB1P25685 340 aa19.08■□□□□ 0.65
USP39-202ENST00000409025 OCRLQ01968 901 aa19.08■□□□□ 0.65
USP39-202ENST00000409025 UBE3AQ05086 875 aa19.08■□□□□ 0.65
USP39-202ENST00000409025 GALNTL6Q49A17 601 aa19.08■□□□□ 0.65
USP39-202ENST00000409025 MPPE1Q53F39 396 aa19.08■□□□□ 0.65
USP39-202ENST00000409025 MBLAC2Q68D91 279 aa19.08■□□□□ 0.65
USP39-202ENST00000409025 RTL10Q7L3V2 364 aa19.08■□□□□ 0.65
USP39-202ENST00000409025 PTAR1Q7Z6K3 402 aaPredicted RBP19.08■□□□□ 0.65
USP39-202ENST00000409025 RNF135Q8IUD6 432 aa19.08■□□□□ 0.65
USP39-202ENST00000409025 BBS7Q8IWZ6 715 aa19.08■□□□□ 0.65
USP39-202ENST00000409025 C10orf67Q8IYJ2 551 aa19.08■□□□□ 0.65
USP39-202ENST00000409025 DCAF4L2Q8NA75 395 aa19.08■□□□□ 0.65
USP39-202ENST00000409025 BHMTQ93088 406 aa19.08■□□□□ 0.65
USP39-202ENST00000409025 RMDN1Q96DB5 314 aa19.08■□□□□ 0.65
USP39-202ENST00000409025 ELMO2Q96JJ3 720 aa19.08■□□□□ 0.65
USP39-202ENST00000409025 TDRD1Q9BXT4 1180 aaKnown RBP19.08■□□□□ 0.65
USP39-202ENST00000409025 SLC46A2Q9BY10 475 aa19.08■□□□□ 0.65
USP39-202ENST00000409025 MTIF3Q9H2K0 278 aaKnown RBP19.08■□□□□ 0.65
USP39-202ENST00000409025 FBXO6Q9NRD1 293 aaPredicted RBP19.08■□□□□ 0.65
USP39-202ENST00000409025 RIMKLBQ9ULI2 386 aa19.08■□□□□ 0.65
USP39-202ENST00000409025 SLC12A4Q9UP95 1085 aa19.08■□□□□ 0.65
USP39-202ENST00000409025 KCTD3Q9Y597 815 aa19.08■□□□□ 0.65
USP39-202ENST00000409025 LEFTY2O00292 366 aa19.08■□□□□ 0.64
USP39-202ENST00000409025 PHGDHO43175 533 aaKnown RBP19.08■□□□□ 0.64
USP39-202ENST00000409025 COL6A2P12110 1019 aa19.08■□□□□ 0.64
USP39-202ENST00000409025 STMN1P16949 149 aa19.08■□□□□ 0.64
USP39-202ENST00000409025 CRABP2P29373 138 aa19.08■□□□□ 0.64
USP39-202ENST00000409025 LEPRP48357 1165 aaKnown RBP19.08■□□□□ 0.64
USP39-202ENST00000409025 RAB10P61026 200 aa19.08■□□□□ 0.64
USP39-202ENST00000409025 ACVR1Q04771 509 aa19.08■□□□□ 0.64
USP39-202ENST00000409025 NSUN2Q08J23 767 aaKnown RBP eCLIP19.08■□□□□ 0.64
USP39-202ENST00000409025 MPP7Q5T2T1 576 aa19.08■□□□□ 0.64
USP39-202ENST00000409025 GALNT7Q86SF2 657 aa19.08■□□□□ 0.64
USP39-202ENST00000409025 CRLF3Q8IUI8 442 aa19.08■□□□□ 0.64
USP39-202ENST00000409025 GPATCH11Q8N954 259 aa19.08■□□□□ 0.64
USP39-202ENST00000409025 NSMCE3Q96MG7 304 aa19.08■□□□□ 0.64
USP39-202ENST00000409025 LRRC37BQ96QE4 947 aa19.08■□□□□ 0.64
USP39-202ENST00000409025 NMRAL1Q9HBL8 299 aa19.08■□□□□ 0.64
USP39-202ENST00000409025 THAP1Q9NVV9 213 aa19.08■□□□□ 0.64
USP39-202ENST00000409025 VPS51Q9UID3 782 aa19.08■□□□□ 0.64
USP39-202ENST00000409025 MID2Q9UJV3 735 aa19.08■□□□□ 0.64
USP39-202ENST00000409025 ARL5AQ9Y689 179 aa19.08■□□□□ 0.64
USP39-202ENST00000409025 CAPN7Q9Y6W3 813 aa19.08■□□□□ 0.64
USP39-202ENST00000409025 A0A0G2JND7 137 aa19.07■□□□□ 0.64
USP39-202ENST00000409025 LINC01553A4QN01 128 aa19.07■□□□□ 0.64
USP39-202ENST00000409025 NRG2O14511 850 aaPredicted RBP19.07■□□□□ 0.64
USP39-202ENST00000409025 CRTAMO95727 393 aa19.07■□□□□ 0.64
USP39-202ENST00000409025 APOA4P06727 396 aa19.07■□□□□ 0.64
USP39-202ENST00000409025 FGF3P11487 239 aaPredicted RBP19.07■□□□□ 0.64
USP39-202ENST00000409025 AVPR1AP37288 418 aa19.07■□□□□ 0.64
USP39-202ENST00000409025 ARSDP51689 593 aa19.07■□□□□ 0.64
USP39-202ENST00000409025 ARFIP2P53365 341 aa19.07■□□□□ 0.64
USP39-202ENST00000409025 SLC12A2P55011 1212 aa19.07■□□□□ 0.64
USP39-202ENST00000409025 POU4F1Q01851 419 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms