RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 GKAP1Q5VSY0 366 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 PRAMEF17Q5VTA0 474 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 TBC1D9BQ66K14 1250 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 ANKRD23Q86SG2 305 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 ADGRA1Q86SQ6 560 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 CHSY1Q86X52 802 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 ADGRF4Q8IZF3 695 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 ARL14EPQ8N8R7 260 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 ARHGEF26Q96DR7 871 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 MMABQ96EY8 250 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 SAT2Q96F10 170 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 CNDP2Q96KP4 475 aaKnown RBP4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 TMEM68Q96MH6 324 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 SLC6A13Q9NSD5 602 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 GIMAP4Q9NUV9 329 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 ADAM21Q9UKJ8 722 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 SLC4A4Q9Y6R1 1079 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 ABCC5O15440 1437 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 PRG4Q92954 1404 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 CEP170Q5SW79 1584 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 A0A1W2PQF6 199 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 FAM170AA1A519 330 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 SLC22A23A1A5C7 686 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 TARSL2A2RTX5 802 aaKnown RBP4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 F8W810 466 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 HCRTR2O43614 444 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 ERAL1O75616 437 aaKnown RBP4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 MTA2O94776 668 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 OR2C1O95371 312 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 PGM3O95394 542 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 INSRRP14616 1297 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 CIITAP33076 1130 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 SLC16A2P36021 539 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 PLA2G5P39877 138 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 EFNA5P52803 228 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 ZBED6P86452 979 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 CDC16Q13042 620 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 ZNF268Q14587 947 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 ADIPOQQ15848 244 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 JADE1Q6IE81 842 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 GLDNQ6ZMI3 551 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 UBE2Q1Q7Z7E8 422 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 KIAA2013Q8IYS2 634 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 HACE1Q8IYU2 909 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 POC5Q8NA72 575 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 POMGNT2Q8NAT1 580 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 RNF183Q96D59 192 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 ZC3HAV1LQ96H79 300 aaKnown RBP4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 ZNF333Q96JL9 665 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 EFHD1Q9BUP0 239 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 C1QTNF1Q9BXJ1 281 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 MRPL1Q9BYD6 325 aaKnown RBP4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 RABEP2Q9H5N1 569 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 POLR1BQ9H9Y6 1135 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 PAPOLBQ9NRJ5 636 aaKnown RBP4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 ASB6Q9NWX5 421 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 MARCH4Q9P2E8 410 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 CPSF2Q9P2I0 782 aaKnown RBP4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 SERGEFQ9UGK8 458 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 MYRFQ9Y2G1 1151 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 DAPK1P53355 1430 aa4.95□□□□□ -1.62
HMGB3P18-201ENST00000406327 LRRIQ1Q96JM4 1722 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 ATP10BO94823 1461 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 GPATCH8Q9UKJ3 1502 aaKnown RBP4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 FOXO6A8MYZ6 492 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 RHODO00212 210 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 MGST3O14880 152 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 PRPF4O43172 522 aaKnown RBP eCLIP4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 SEC14L5O43304 696 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 HS6ST1O60243 411 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 GJB3O75712 270 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 NEURL1O76050 574 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 RPN1P04843 607 aaKnown RBP4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 ADRB2P07550 413 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 MYZAPP0CAP1 466 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 ACTN1P12814 892 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 PIK3CAP42336 1068 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 SLC15A1P46059 708 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 F2RL1P55085 397 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 RRP1P56182 461 aaKnown RBP4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 YPEL5P62699 121 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 CEBPZQ03701 1054 aaKnown RBP4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 SLC18A2Q05940 514 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 FGFBP1Q14512 234 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 DRAP1Q14919 205 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 KRT24Q2M2I5 525 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 TCTN1Q2MV58 587 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 PROSER3Q2NL68 480 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 C15orf59Q2T9L4 293 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 SLC9C1Q4G0N8 1177 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 SYTL3Q4VX76 610 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 FCRLBQ6BAA4 426 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 FAM57BQ71RH2 274 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 SERPINA11Q86U17 422 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 DDIASQ8IXT1 998 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 OR4N2Q8NGD1 307 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 PRPF31Q8WWY3 499 aaKnown RBP4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 LARP4BQ92615 738 aaKnown RBP4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 MAP4K1Q92918 833 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 RADILQ96JH8 1075 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms