RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 A0A0G2JPF8 293 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 MANSC4A6NHS7 340 aaPredicted RBP5.9□□□□□ -1.46
HDAC9-203ENST00000406072 HNRNPCL3B7ZW38 293 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 DFFAO00273 331 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 TIMM44O43615 452 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 SERPINB7O75635 380 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 B3GALNT1O75752 331 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 HLA-DRAP01903 254 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 HNRNPCL4P0DMR1 293 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 SFNP31947 248 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 ABCG1P45844 678 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 RPS9P46781 194 aaKnown RBP5.9□□□□□ -1.46
HDAC9-203ENST00000406072 ACOT2P49753 483 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 CCT8P50990 548 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 CD83Q01151 205 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 TNK2Q07912 1038 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 MERTKQ12866 999 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 EPS8Q12929 822 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 PGM5Q15124 567 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 C5orf22Q49AR2 442 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 COLEC12Q5KU26 742 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 CES3Q6UWW8 571 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 THAP5Q7Z6K1 395 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 P2RY8Q86VZ1 359 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 RASAL3Q86YV0 1011 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 HIPK1Q86Z02 1210 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 RAVER1Q8IY67 606 aaKnown RBP5.9□□□□□ -1.46
HDAC9-203ENST00000406072 MIER2Q8N344 545 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 ZNF276Q8N554 614 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 DNAJB14Q8TBM8 379 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 TAS1R2Q8TE23 839 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 SLC7A3Q8WY07 619 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 PRR11Q96HE9 360 aaPredicted RBP5.9□□□□□ -1.46
HDAC9-203ENST00000406072 NODALQ96S42 347 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 RBBP8Q99708 897 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 NAT9Q9BTE0 207 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 FRMD8P1Q9BZ68 369 aaPredicted RBP5.9□□□□□ -1.46
HDAC9-203ENST00000406072 PCDHAC1Q9H158 963 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 TBC1D13Q9NVG8 400 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 C3orf18Q9UK00 162 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 IFT52Q9Y366 437 aa5.9□□□□□ -1.46
HDAC9-203ENST00000406072 INO80B-WBP1J3KQ70 363 aa5.9□□□□□ -1.47
HDAC9-203ENST00000406072 PLOD3O60568 738 aa5.9□□□□□ -1.47
HDAC9-203ENST00000406072 MSH3P20585 1137 aa5.9□□□□□ -1.47
HDAC9-203ENST00000406072 HOXD13P35453 343 aa5.9□□□□□ -1.47
HDAC9-203ENST00000406072 SNRPFP62306 86 aaKnown RBP5.9□□□□□ -1.47
HDAC9-203ENST00000406072 SLC13A2Q13183 592 aa5.9□□□□□ -1.47
HDAC9-203ENST00000406072 FRG1Q14331 258 aaKnown RBP5.9□□□□□ -1.47
HDAC9-203ENST00000406072 PRKD1Q15139 912 aaPredicted RBP5.9□□□□□ -1.47
HDAC9-203ENST00000406072 BMT2Q1RMZ1 405 aa5.9□□□□□ -1.47
HDAC9-203ENST00000406072 MTERF2Q49AM1 385 aa5.9□□□□□ -1.47
HDAC9-203ENST00000406072 ATP6AP1LQ52LC2 224 aa5.9□□□□□ -1.47
HDAC9-203ENST00000406072 AMIGO1Q86WK6 493 aa5.9□□□□□ -1.47
HDAC9-203ENST00000406072 CBWD2Q8IUF1 395 aa5.9□□□□□ -1.47
HDAC9-203ENST00000406072 SPPL2CQ8IUH8 684 aa5.9□□□□□ -1.47
HDAC9-203ENST00000406072 KATNAL2Q8IYT4 538 aa5.9□□□□□ -1.47
HDAC9-203ENST00000406072 UTP15Q8TED0 518 aaKnown RBP5.9□□□□□ -1.47
HDAC9-203ENST00000406072 SLC44A1Q8WWI5 657 aa5.9□□□□□ -1.47
HDAC9-203ENST00000406072 PHF21BQ96EK2 531 aa5.9□□□□□ -1.47
HDAC9-203ENST00000406072 MSANTD3Q96H12 275 aa5.9□□□□□ -1.47
HDAC9-203ENST00000406072 ZNF486Q96H40 463 aaPredicted RBP5.9□□□□□ -1.47
HDAC9-203ENST00000406072 INO80BQ9C086 356 aaPredicted RBP5.9□□□□□ -1.47
HDAC9-203ENST00000406072 MIR1-1HGQ9H1L0 117 aa5.9□□□□□ -1.47
HDAC9-203ENST00000406072 KCTD10Q9H3F6 313 aa5.9□□□□□ -1.47
HDAC9-203ENST00000406072 ST6GALNAC4Q9H4F1 302 aa5.9□□□□□ -1.47
HDAC9-203ENST00000406072 GBA2Q9HCG7 927 aaPredicted RBP5.9□□□□□ -1.47
HDAC9-203ENST00000406072 SSU72Q9NP77 194 aaKnown RBP5.9□□□□□ -1.47
HDAC9-203ENST00000406072 PNPLA8Q9NP80 782 aa5.9□□□□□ -1.47
HDAC9-203ENST00000406072 XPNPEP1Q9NQW7 623 aa5.9□□□□□ -1.47
HDAC9-203ENST00000406072 TMLHEQ9NVH6 421 aa5.9□□□□□ -1.47
HDAC9-203ENST00000406072 RBAKQ9NYW8 714 aaPredicted RBP5.9□□□□□ -1.47
HDAC9-203ENST00000406072 TMEM9Q9P0T7 183 aa5.9□□□□□ -1.47
HDAC9-203ENST00000406072 MLXQ9UH92 298 aa5.9□□□□□ -1.47
HDAC9-203ENST00000406072 POU2F3Q9UKI9 436 aa5.9□□□□□ -1.47
HDAC9-203ENST00000406072 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.9□□□□□ -1.47
HDAC9-203ENST00000406072 DRG1Q9Y295 367 aaKnown RBP5.9□□□□□ -1.47
HDAC9-203ENST00000406072 FAM240BA0A1B0GVZ2 78 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 F8VP50 259 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 DHX15O43143 795 aaKnown RBP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 NDUFS2O75306 463 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 RECQL5O94762 991 aaPredicted RBP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 ZNF682O95780 498 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 CLIC3O95833 236 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 DLDP09622 509 aaKnown RBP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 TGFB3P10600 412 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 VARSP26640 1264 aaKnown RBP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 POU1F1P28069 291 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 GABRB2P47870 512 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 JAK3P52333 1124 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 MADCAM1Q13477 382 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 SEMA3AQ14563 771 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 SUZ12Q15022 739 aaKnown RBP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 ACAP2Q15057 778 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 RBBP7Q16576 425 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 DGKKQ5KSL6 1271 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 SNAP47Q5SQN1 464 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 SLFN12LQ6IEE8 588 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 DUS1LQ6P1R4 473 aaKnown RBP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 VSIG10LQ86VR7 867 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 DEPDC4Q8N2C3 294 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms