RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 ZSWIM9Q86XI8 627 aa15.52■□□□□ 0.08
TPM1-207ENST00000403994 TP53I13Q8NBR0 393 aaPredicted RBP15.52■□□□□ 0.08
TPM1-207ENST00000403994 TSEN2Q8NCE0 465 aaKnown RBP15.52■□□□□ 0.08
TPM1-207ENST00000403994 SYN2Q92777 582 aaPredicted RBP15.52■□□□□ 0.08
TPM1-207ENST00000403994 APOLD1Q96LR9 279 aa15.52■□□□□ 0.08
TPM1-207ENST00000403994 TUBGCP5Q96RT8 1024 aa15.52■□□□□ 0.08
TPM1-207ENST00000403994 C1QTNF7Q9BXJ2 289 aa15.52■□□□□ 0.08
TPM1-207ENST00000403994 SP110Q9HB58 689 aa15.52■□□□□ 0.08
TPM1-207ENST00000403994 MRPL47Q9HD33 250 aaKnown RBP15.52■□□□□ 0.08
TPM1-207ENST00000403994 PCDH12Q9NPG4 1184 aa15.52■□□□□ 0.08
TPM1-207ENST00000403994 CWC15Q9P013 229 aaKnown RBP15.52■□□□□ 0.08
TPM1-207ENST00000403994 PNMA8BQ9ULN7 279 aaPredicted RBP15.52■□□□□ 0.08
TPM1-207ENST00000403994 URB1O60287 2271 aaKnown RBP15.52■□□□□ 0.07
TPM1-207ENST00000403994 ATRXP46100 2492 aa15.51■□□□□ 0.07
TPM1-207ENST00000403994 NEMP2A6NFY4 417 aa15.51■□□□□ 0.07
TPM1-207ENST00000403994 K7ESM1 405 aa15.51■□□□□ 0.07
TPM1-207ENST00000403994 BUB1BO60566 1050 aaPredicted RBP15.51■□□□□ 0.07
TPM1-207ENST00000403994 PALMO75781 387 aa15.51■□□□□ 0.07
TPM1-207ENST00000403994 TM7SF2O76062 418 aa15.51■□□□□ 0.07
TPM1-207ENST00000403994 JUNDP17535 347 aa15.51■□□□□ 0.07
TPM1-207ENST00000403994 XPAP23025 273 aaPredicted RBP15.51■□□□□ 0.07
TPM1-207ENST00000403994 HCAR3P49019 387 aa15.51■□□□□ 0.07
TPM1-207ENST00000403994 THOP1P52888 689 aa15.51■□□□□ 0.07
TPM1-207ENST00000403994 EIF2B5Q13144 721 aaKnown RBP15.51■□□□□ 0.07
TPM1-207ENST00000403994 TARDBPQ13148 414 aaKnown RBP eCLIP15.51■□□□□ 0.07
TPM1-207ENST00000403994 DPYSL2Q16555 572 aa15.51■□□□□ 0.07
TPM1-207ENST00000403994 TMEM52BQ4KMG9 183 aa15.51■□□□□ 0.07
TPM1-207ENST00000403994 BRAT1Q6PJG6 821 aa15.51■□□□□ 0.07
TPM1-207ENST00000403994 MACC1Q6ZN28 852 aa15.51■□□□□ 0.07
TPM1-207ENST00000403994 CAMK1DQ8IU85 385 aa15.51■□□□□ 0.07
TPM1-207ENST00000403994 TP53INP2Q8IXH6 220 aa15.51■□□□□ 0.07
TPM1-207ENST00000403994 RBFAQ8N0V3 343 aa15.51■□□□□ 0.07
TPM1-207ENST00000403994 FAM181AQ8N9Y4 354 aa15.51■□□□□ 0.07
TPM1-207ENST00000403994 HCAR2Q8TDS4 363 aa15.51■□□□□ 0.07
TPM1-207ENST00000403994 ZNF641Q96N77 438 aaPredicted RBP15.51■□□□□ 0.07
TPM1-207ENST00000403994 CINPQ9BW66 212 aaPredicted RBP15.51■□□□□ 0.07
TPM1-207ENST00000403994 THAP2Q9H0W7 228 aa15.51■□□□□ 0.07
TPM1-207ENST00000403994 SUV39H2Q9H5I1 410 aa15.51■□□□□ 0.07
TPM1-207ENST00000403994 ATP13A3Q9H7F0 1226 aa15.51■□□□□ 0.07
TPM1-207ENST00000403994 ZWILCHQ9H900 591 aa15.51■□□□□ 0.07
TPM1-207ENST00000403994 MBNL1Q9NR56 388 aaKnown RBP15.51■□□□□ 0.07
TPM1-207ENST00000403994 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.51■□□□□ 0.07
TPM1-207ENST00000403994 APOBEC3BQ9UH17 382 aaKnown RBP15.51■□□□□ 0.07
TPM1-207ENST00000403994 IPO11Q9UI26 975 aaKnown RBP15.51■□□□□ 0.07
TPM1-207ENST00000403994 LHX6Q9UPM6 363 aa15.51■□□□□ 0.07
TPM1-207ENST00000403994 COQ6Q9Y2Z9 468 aa15.51■□□□□ 0.07
TPM1-207ENST00000403994 ASXL3Q9C0F0 2248 aa15.51■□□□□ 0.07
TPM1-207ENST00000403994 H3BRJ5 948 aa15.5■□□□□ 0.07
TPM1-207ENST00000403994 MUSKO15146 869 aa15.5■□□□□ 0.07
TPM1-207ENST00000403994 AQP9O43315 295 aa15.5■□□□□ 0.07
TPM1-207ENST00000403994 GYPCP04921 128 aa15.5■□□□□ 0.07
TPM1-207ENST00000403994 SERPING1P05155 500 aa15.5■□□□□ 0.07
TPM1-207ENST00000403994 MYF5P13349 255 aa15.5■□□□□ 0.07
TPM1-207ENST00000403994 C6P13671 934 aa15.5■□□□□ 0.07
TPM1-207ENST00000403994 SERPINA4P29622 427 aa15.5■□□□□ 0.07
TPM1-207ENST00000403994 CSNK1DP48730 415 aa15.5■□□□□ 0.07
TPM1-207ENST00000403994 UBASH3AP57075 661 aa15.5■□□□□ 0.07
TPM1-207ENST00000403994 ZBED6P86452 979 aa15.5■□□□□ 0.07
TPM1-207ENST00000403994 IL10RBQ08334 325 aa15.5■□□□□ 0.07
TPM1-207ENST00000403994 ACAP1Q15027 740 aa15.5■□□□□ 0.07
TPM1-207ENST00000403994 UGP2Q16851 508 aa15.5■□□□□ 0.07
TPM1-207ENST00000403994 CFAP58Q5T655 872 aa15.5■□□□□ 0.07
TPM1-207ENST00000403994 ZCCHC8Q6NZY4 707 aaKnown RBP15.5■□□□□ 0.07
TPM1-207ENST00000403994 SRLQ86TD4 932 aa15.5■□□□□ 0.07
TPM1-207ENST00000403994 NIPA2Q8N8Q9 360 aa15.5■□□□□ 0.07
TPM1-207ENST00000403994 DCBLD1Q8N8Z6 715 aa15.5■□□□□ 0.07
TPM1-207ENST00000403994 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.5■□□□□ 0.07
TPM1-207ENST00000403994 LRRC61Q9BV99 259 aa15.5■□□□□ 0.07
TPM1-207ENST00000403994 DUSP23Q9BVJ7 150 aa15.5■□□□□ 0.07
TPM1-207ENST00000403994 TCEAL2Q9H3H9 227 aaPredicted RBP15.5■□□□□ 0.07
TPM1-207ENST00000403994 USP29Q9HBJ7 922 aa15.5■□□□□ 0.07
TPM1-207ENST00000403994 CLCA2Q9UQC9 943 aa15.5■□□□□ 0.07
TPM1-207ENST00000403994 ATP8A1Q9Y2Q0 1164 aa15.5■□□□□ 0.07
TPM1-207ENST00000403994 BZW2Q9Y6E2 419 aaKnown RBP15.5■□□□□ 0.07
TPM1-207ENST00000403994 CSNK1G3Q9Y6M4 447 aa15.5■□□□□ 0.07
TPM1-207ENST00000403994 TOR1BO14657 336 aa15.49■□□□□ 0.07
TPM1-207ENST00000403994 PRKCGP05129 697 aa15.49■□□□□ 0.07
TPM1-207ENST00000403994 ARL4AP40617 200 aa15.49■□□□□ 0.07
TPM1-207ENST00000403994 YPEL5P62699 121 aa15.49■□□□□ 0.07
TPM1-207ENST00000403994 SLC25A11Q02978 314 aaKnown RBP15.49■□□□□ 0.07
TPM1-207ENST00000403994 PTK2BQ14289 1009 aa15.49■□□□□ 0.07
TPM1-207ENST00000403994 RFTN1Q14699 578 aaPredicted RBP15.49■□□□□ 0.07
TPM1-207ENST00000403994 TMCO4Q5TGY1 634 aa15.49■□□□□ 0.07
TPM1-207ENST00000403994 TXNRD3NBQ6F5E7 133 aa15.49■□□□□ 0.07
TPM1-207ENST00000403994 ERAP2Q6P179 960 aa15.49■□□□□ 0.07
TPM1-207ENST00000403994 POLNQ7Z5Q5 900 aa15.49■□□□□ 0.07
TPM1-207ENST00000403994 PHACTR4Q8IZ21 702 aa15.49■□□□□ 0.07
TPM1-207ENST00000403994 LZTR1Q8N653 840 aa15.49■□□□□ 0.07
TPM1-207ENST00000403994 HSPH1Q92598 858 aa15.49■□□□□ 0.07
TPM1-207ENST00000403994 ECHDC3Q96DC8 303 aa15.49■□□□□ 0.07
TPM1-207ENST00000403994 IQCDQ96DY2 449 aa15.49■□□□□ 0.07
TPM1-207ENST00000403994 BTBD6Q96KE9 485 aa15.49■□□□□ 0.07
TPM1-207ENST00000403994 CSPG4P5Q96PW8 444 aa15.49■□□□□ 0.07
TPM1-207ENST00000403994 NUP85Q9BW27 656 aa15.49■□□□□ 0.07
TPM1-207ENST00000403994 ETNK2Q9NVF9 386 aa15.49■□□□□ 0.07
TPM1-207ENST00000403994 ANAPC7Q9UJX3 599 aa15.49■□□□□ 0.07
TPM1-207ENST00000403994 CAPN11Q9UMQ6 739 aa15.49■□□□□ 0.07
TPM1-207ENST00000403994 MGAQ8IWI9 3026 aa15.49■□□□□ 0.07
TPM1-207ENST00000403994 ATMQ13315 3056 aa15.48■□□□□ 0.07
TPM1-207ENST00000403994 RP1P56715 2156 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms