RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 PNMA6AP0CW24 399 aaPredicted RBP12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 CASRP41180 1078 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 RNASE9P60153 205 aaKnown RBP12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 SLC20A2Q08357 652 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 KCNAB2Q13303 367 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 MYLK3Q32MK0 819 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 CCDC40Q4G0X9 1142 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 BRMS1LQ5PSV4 323 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 CERCAMQ5T4B2 595 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 RETSATQ6NUM9 610 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 FOXR2Q6PJQ5 311 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 RD3Q7Z3Z2 195 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 ZSCAN30Q86W11 494 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 PLPP6Q8IY26 295 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 DRC7Q8IY82 874 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 FSTL5Q8N475 847 aaPredicted RBP12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 PLA2G15Q8NCC3 412 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 CCL4L1Q8NHW4 92 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 OR1E3Q8WZA6 343 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 ARHGEF2Q92974 986 aaKnown RBP12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 ISG20Q96AZ6 181 aaKnown RBP12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 PGAP3Q96FM1 320 aaPredicted RBP12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 C1orf74Q96LT6 269 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 CRACR2AQ9BSW2 395 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 KLC2Q9H0B6 622 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 ZNF71Q9NQZ8 489 aaPredicted RBP12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 SEPT10Q9P0V9 454 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 PCDHGC3Q9UN70 934 aa12.03□□□□□ -0.48
SPTLC1P3-201ENST00000403408 PPP1R3GB7ZBB8 358 aa12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 KRIT1O00522 736 aa12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 TM7SF2O76062 418 aa12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 FGF3P11487 239 aaPredicted RBP12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 LIFP15018 202 aa12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 FLT3P36888 993 aa12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 SULT1E1P49888 294 aa12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 SRP54P61011 504 aaKnown RBP12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 HLTFQ14527 1009 aaKnown RBP eCLIP12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 NFATC4Q14934 902 aa12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 ELOCQ15369 112 aa12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 C4orf17Q53FE4 359 aa12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 EFHC2Q5JST6 749 aa12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 MANEALQ5VSG8 457 aa12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 BORAQ6PGQ7 559 aa12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 ENPP7Q6UWV6 458 aa12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 ZNF783Q6ZMS7 281 aa12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 NLRP14Q86W24 1093 aa12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 PELI3Q8N2H9 469 aa12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 RYBPQ8N488 228 aaPredicted RBP12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 RCBTB1Q8NDN9 531 aa12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 OR2AP1Q8NGE2 309 aa12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 RBM15Q96T37 977 aaKnown RBP eCLIP12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 NUDT22Q9BRQ3 303 aa12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 APOOQ9BUR5 198 aa12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 ADNPQ9H2P0 1102 aa12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 RDH14Q9HBH5 336 aa12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 MRPL40Q9NQ50 206 aaKnown RBP12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 SEPT3Q9UH03 358 aa12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 DACH1Q9UI36 760 aa12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 DOLKQ9UPQ8 538 aa12.02□□□□□ -0.49
SPTLC1P3-201ENST00000403408 MED13Q9UHV7 2174 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 TMEM202A6NGA9 273 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 FAM72CH0Y354 149 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 DUX1O43812 170 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 GSRP00390 522 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 ALPIP09923 528 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 SLC9A1P19634 815 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 PEX5P50542 639 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 OR1D5P58170 312 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 KRT85P78386 507 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 DEUP1Q05D60 604 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 INPP5AQ14642 412 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 ARHGAP44Q17R89 818 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 TMEM52BQ4KMG9 183 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 C2CD6Q53TS8 623 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 PHF19Q5T6S3 580 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 FAM72AQ5TYM5 149 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 FAM72DQ6L9T8 149 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 GDPD4Q6W3E5 623 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 TTC7BQ86TV6 843 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 FAM72BQ86X60 149 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 ZSWIM9Q86XI8 627 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 ZSCAN1Q8NBB4 408 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 SHC3Q92529 594 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 GSDMAQ96QA5 445 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 ZYG11BQ9C0D3 744 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 NOL6Q9H6R4 1146 aaKnown RBP12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 FGF22Q9HCT0 170 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 FBN2P35556 2912 aa12.01□□□□□ -0.49
SPTLC1P3-201ENST00000403408 K7EM74 188 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 TOR1BO14657 336 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 NKX2-8O15522 239 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 RASGRP1O95267 797 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 POP4O95707 220 aaKnown RBP12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 PRKCGP05129 697 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 RNF224P0DH78 156 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 CTSEP14091 401 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 GLB1P16278 677 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 GM2AP17900 193 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 UGT1A3P35503 534 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms