RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 KDELR1P24390 212 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 BMXP51813 675 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 CDH15P55291 814 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 LSM3P62310 102 aaKnown RBP10.04□□□□□ -0.8
PTPRM-203ENST00000400060 FUT2Q10981 343 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 DAG1Q14118 895 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 DCAF6Q58WW2 860 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 GPAT2Q6NUI2 795 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 TMPRSS11AQ6ZMR5 421 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 NPAS2Q99743 824 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 PRRG3Q9BZD7 231 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 EPB41L4BQ9H329 900 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 VPS51Q9UID3 782 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 ZNF222Q9UK12 451 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 EFCAB14O75071 495 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 SMIM18P0DKX4 95 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 HSF2Q03933 536 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 HABP4Q5JVS0 413 aaKnown RBP10.04□□□□□ -0.8
PTPRM-203ENST00000400060 ERICH5Q6P6B1 374 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 FAM131AQ6UXB0 335 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 GRAMD2AQ8IUY3 354 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 ZC3H3Q8IXZ2 948 aaKnown RBP10.04□□□□□ -0.8
PTPRM-203ENST00000400060 C9orf43Q8TAL5 461 aaPredicted RBP10.04□□□□□ -0.8
PTPRM-203ENST00000400060 CPT1BQ92523 772 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 USP18Q9UMW8 372 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 ST14Q9Y5Y6 855 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 LOC100506127A0A0U1RQW1 187 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 NCAM2O15394 837 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 NPHS1O60500 1241 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 UPK1BO75841 260 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 XRCC1P18887 633 aaPredicted RBP10.04□□□□□ -0.8
PTPRM-203ENST00000400060 EPGNQ6UW88 154 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 ZYG11AQ6WRX3 759 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 ABHD11Q8NFV4 315 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 NSUN6Q8TEA1 469 aaKnown RBP10.04□□□□□ -0.8
PTPRM-203ENST00000400060 OTUB1Q96FW1 271 aaPredicted RBP10.04□□□□□ -0.8
PTPRM-203ENST00000400060 CRELD1Q96HD1 420 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 TNIP3Q96KP6 325 aa10.04□□□□□ -0.8
PTPRM-203ENST00000400060 RPF1Q9H9Y2 349 aaKnown RBP10.04□□□□□ -0.8
PTPRM-203ENST00000400060 IRGMA1A4Y4 181 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 SYNCRIPO60506 623 aaKnown RBP10.03□□□□□ -0.8
PTPRM-203ENST00000400060 NTSR2O95665 410 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 HSMCR30P0CW71 290 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 PSKH1P11801 424 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 POLR2CP19387 275 aaPredicted RBP10.03□□□□□ -0.8
PTPRM-203ENST00000400060 CASP7P55210 303 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 UBXN2AP68543 259 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 QRICH1Q2TAL8 776 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 ZIK1Q3SY52 487 aaPredicted RBP10.03□□□□□ -0.8
PTPRM-203ENST00000400060 TBRG1Q3YBR2 411 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 CBWD6Q4V339 395 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 CBWD3Q5JTY5 395 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 CBWD5Q5RIA9 395 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 RC3H1Q5TC82 1133 aaKnown RBP10.03□□□□□ -0.8
PTPRM-203ENST00000400060 C16orf86Q6ZW13 317 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 PTF1AQ7RTS3 328 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 CATSPER4Q7RTX7 472 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 SPATA19Q7Z5L4 167 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 FBXO33Q7Z6M2 555 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 RIOX2Q8IUF8 465 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 TBC1D15Q8TC07 691 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 VMP1Q96GC9 406 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 SH3YL1Q96HL8 342 aaPredicted RBP10.03□□□□□ -0.8
PTPRM-203ENST00000400060 MRPL57Q9BQC6 102 aaKnown RBP10.03□□□□□ -0.8
PTPRM-203ENST00000400060 TINF2Q9BSI4 451 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 ANKEF1Q9NU02 776 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.03□□□□□ -0.8
PTPRM-203ENST00000400060 FAM240BA0A1B0GVZ2 78 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 USP17L15C9J2P7 530 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 USP17L13C9JLJ4 530 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 USP17L11C9JVI0 530 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 USP17L18D6R9N7 530 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 USP17L22D6RA61 530 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 USP17L17D6RBQ6 530 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 USP17L19D6RCP7 530 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 USP17L20D6RJB6 530 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 ANXA9O76027 345 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 PCSK2P16519 638 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 CD72P21854 359 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 ITKQ08881 620 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 USP17L24Q0WX57 530 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 SIGIRRQ6IA17 410 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 ANKRD26P1Q6NSI1 321 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 USP17L6PQ6QN14 398 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 IFNL1Q8IU54 200 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 ANKRD53Q8N9V6 530 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 PJA1Q8NG27 643 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 OR10T2Q8NGX3 314 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 URGCPQ8TCY9 931 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 SNX19Q92543 992 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 FRMD6Q96NE9 622 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 TSEN34Q9BSV6 310 aaKnown RBP10.03□□□□□ -0.8
PTPRM-203ENST00000400060 RIOX1Q9H6W3 641 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 GPBP1L1Q9HC44 474 aaPredicted RBP10.03□□□□□ -0.8
PTPRM-203ENST00000400060 ADPRHL2Q9NX46 363 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 KIAA1257Q9ULG3 409 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 SSR3Q9UNL2 185 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 IGSF9BQ9UPX0 1349 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 ARHGEF33A8MVX0 844 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 USP17L10C9JJH3 530 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms