RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 FAM86C2PA6NEL3 165 aa7.59□□□□□ -1.19
USP16-204ENST00000399976 C16orf96A6NNT2 1141 aa7.59□□□□□ -1.19
USP16-204ENST00000399976 SEMA4FO95754 770 aa7.59□□□□□ -1.19
USP16-204ENST00000399976 CD27P26842 260 aa7.59□□□□□ -1.19
USP16-204ENST00000399976 ADRA1AP35348 466 aa7.59□□□□□ -1.19
USP16-204ENST00000399976 CKAP4Q07065 602 aaKnown RBP7.59□□□□□ -1.19
USP16-204ENST00000399976 WHAMMP3Q1A5X7 153 aa7.59□□□□□ -1.19
USP16-204ENST00000399976 SETMARQ53H47 684 aaPredicted RBP7.59□□□□□ -1.19
USP16-204ENST00000399976 ERAP2Q6P179 960 aa7.59□□□□□ -1.19
USP16-204ENST00000399976 ARHGAP36Q6ZRI8 547 aa7.59□□□□□ -1.19
USP16-204ENST00000399976 SDR16C5Q8N3Y7 309 aa7.59□□□□□ -1.19
USP16-204ENST00000399976 CNTD1Q8N815 330 aa7.59□□□□□ -1.19
USP16-204ENST00000399976 ST13P5Q8NFI4 369 aaPredicted RBP7.59□□□□□ -1.19
USP16-204ENST00000399976 ATL2Q8NHH9 583 aa7.59□□□□□ -1.19
USP16-204ENST00000399976 C1orf216Q8TAB5 229 aa7.59□□□□□ -1.19
USP16-204ENST00000399976 PTCD2Q8WV60 388 aaKnown RBP7.59□□□□□ -1.19
USP16-204ENST00000399976 PIH1D2Q8WWB5 315 aa7.59□□□□□ -1.19
USP16-204ENST00000399976 HHIPQ96QV1 700 aa7.59□□□□□ -1.19
USP16-204ENST00000399976 KLHL11Q9NVR0 708 aa7.59□□□□□ -1.19
USP16-204ENST00000399976 PCDHGB2Q9Y5G2 931 aa7.59□□□□□ -1.19
USP16-204ENST00000399976 RNF103O00237 685 aa7.59□□□□□ -1.2
USP16-204ENST00000399976 NDST3O95803 873 aa7.59□□□□□ -1.2
USP16-204ENST00000399976 CPP00450 1065 aa7.59□□□□□ -1.2
USP16-204ENST00000399976 ATP1A1P05023 1023 aaKnown RBP7.59□□□□□ -1.2
USP16-204ENST00000399976 MLNP12872 115 aa7.59□□□□□ -1.2
USP16-204ENST00000399976 VIPR1P32241 457 aa7.59□□□□□ -1.2
USP16-204ENST00000399976 GJC1P36383 396 aa7.59□□□□□ -1.2
USP16-204ENST00000399976 YPEL5P62699 121 aa7.59□□□□□ -1.2
USP16-204ENST00000399976 ADCY2Q08462 1091 aa7.59□□□□□ -1.2
USP16-204ENST00000399976 ZBTB17Q13105 803 aa7.59□□□□□ -1.2
USP16-204ENST00000399976 ARMC12Q5T9G4 340 aa7.59□□□□□ -1.2
USP16-204ENST00000399976 NAPEPLDQ6IQ20 393 aa7.59□□□□□ -1.2
USP16-204ENST00000399976 USP45Q70EL2 814 aa7.59□□□□□ -1.2
USP16-204ENST00000399976 PARS2Q7L3T8 475 aaKnown RBP7.59□□□□□ -1.2
USP16-204ENST00000399976 HOOK3Q86VS8 718 aa7.59□□□□□ -1.2
USP16-204ENST00000399976 CREG2Q8IUH2 290 aa7.59□□□□□ -1.2
USP16-204ENST00000399976 ZNF567Q8N184 647 aa7.59□□□□□ -1.2
USP16-204ENST00000399976 TTC16Q8NEE8 873 aa7.59□□□□□ -1.2
USP16-204ENST00000399976 TRIM44Q96DX7 344 aaPredicted RBP7.59□□□□□ -1.2
USP16-204ENST00000399976 RPL10LQ96L21 214 aaKnown RBP7.59□□□□□ -1.2
USP16-204ENST00000399976 ORAI3Q9BRQ5 295 aa7.59□□□□□ -1.2
USP16-204ENST00000399976 LRRC40Q9H9A6 602 aa7.59□□□□□ -1.2
USP16-204ENST00000399976 MRM3Q9HC36 420 aaKnown RBP7.59□□□□□ -1.2
USP16-204ENST00000399976 COL6A3P12111 3177 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 USP27XA6NNY8 438 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 GPR89AB7ZAQ6 455 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 K7ERQ8 282 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 MUSKO15146 869 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 SPINT1O43278 529 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 ZNF500O60304 480 aaPredicted RBP7.58□□□□□ -1.2
USP16-204ENST00000399976 GPR89BP0CG08 455 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 HLA-EP13747 358 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 TIMP2P16035 220 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 CD68P34810 354 aaPredicted RBP7.58□□□□□ -1.2
USP16-204ENST00000399976 FNTBP49356 437 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 TAS2R38P59533 333 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 GNG11P61952 73 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 AP1B1Q10567 949 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 FRG1Q14331 258 aaKnown RBP7.58□□□□□ -1.2
USP16-204ENST00000399976 UGP2Q16851 508 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 ANKRD20A2Q5SQ80 823 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 ANKRD20A1Q5TYW2 823 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 ANKRD20A3Q5VUR7 823 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 SLC23A3Q6PIS1 610 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 LINGO4Q6UY18 593 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 KYAT3Q6YP21 454 aaKnown RBP7.58□□□□□ -1.2
USP16-204ENST00000399976 PCGF5Q86SE9 256 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 PRPF39Q86UA1 669 aaKnown RBP7.58□□□□□ -1.2
USP16-204ENST00000399976 HORMAD1Q86X24 394 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 TSEN2Q8NCE0 465 aaKnown RBP7.58□□□□□ -1.2
USP16-204ENST00000399976 MCUQ8NE86 351 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 RUBCNQ92622 972 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 LGMNQ99538 433 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 OMDQ99983 421 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 FBXL12Q9NXK8 326 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 BCCIPQ9P287 314 aaKnown RBP eCLIP7.58□□□□□ -1.2
USP16-204ENST00000399976 HEY1Q9Y5J3 304 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 F5P12259 2224 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 A0A0J9YYE9 177 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 A0A1W2PPC4 97 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 KLHL33A6NCF5 533 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 BHMG1C9JSJ3 638 aaPredicted RBP7.58□□□□□ -1.2
USP16-204ENST00000399976 MID1O15344 667 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 TRBC1P01850 177 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 FGGP02679 453 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 PSMD8P48556 350 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 CNTN1Q12860 1018 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 PTK6Q13882 451 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 CDKN3Q16667 212 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 LONRF2Q1L5Z9 754 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 ARSIQ5FYB1 569 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 IL27RAQ6UWB1 636 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 PRELID2Q8N945 189 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 CHST14Q8NCH0 376 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 HMGB4Q8WW32 186 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 COQ10AQ96MF6 247 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 NOD2Q9HC29 1040 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 PILRBQ9UKJ0 227 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 SARDHQ9UL12 918 aa7.58□□□□□ -1.2
USP16-204ENST00000399976 FAM187AA6NFU0 413 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms