RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 FEM1CQ96JP0 617 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 OSBPL9Q96SU4 736 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 SUSD2Q9UGT4 822 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 PHTF1Q9UMS5 762 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 DMTF1Q9Y222 760 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 PIEZO1Q92508 2521 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 TBC1D3DA0A087WVF3 549 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 TBC1D3IA0A087WXS9 549 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 TBC1D3EA0A087X179 549 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 TBC1D3KA0A087X1G2 549 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 TCRBV7S2A1N4TA0A589 114 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 TBC1D3FA6NER0 549 aaPredicted RBP17.81■□□□□ 0.44
CTNS-203ENST00000399306 PRR23AA6NEV1 266 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 TBC1D3LB9A6J9 549 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 LIASO43766 372 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 CEP104O60308 925 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 OPHN1O60890 802 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 PGLSO95336 258 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 ATP1A1P05023 1023 aaKnown RBP17.81■□□□□ 0.44
CTNS-203ENST00000399306 TBC1D3HP0C7X1 549 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 ABL2P42684 1182 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 DSC2Q02487 901 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 NIPAL4Q0D2K0 466 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 SIX1Q15475 284 aaPredicted RBP17.81■□□□□ 0.44
CTNS-203ENST00000399306 OASLQ15646 514 aaKnown RBP17.81■□□□□ 0.44
CTNS-203ENST00000399306 POM121L1PQ3SYA9 428 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 TBC1D3GQ6DHY5 549 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 TBC1D3CQ6IPX1 549 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 ERAP2Q6P179 960 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 SYT12Q8IV01 421 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 TBC1D3Q8IZP1 549 aaPredicted RBP17.81■□□□□ 0.44
CTNS-203ENST00000399306 ZNF567Q8N184 647 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 GPR161Q8N6U8 529 aaKnown RBP17.81■□□□□ 0.44
CTNS-203ENST00000399306 CEP76Q8TAP6 659 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 LRRN4Q8WUT4 740 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 RUBCNQ92622 972 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 NSMCE3Q96MG7 304 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 HSPA12BQ96MM6 686 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 AGAP3Q96P47 875 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 FCRL5Q96RD9 977 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 NAPGQ99747 312 aaPredicted RBP17.81■□□□□ 0.44
CTNS-203ENST00000399306 TDRD1Q9BXT4 1180 aaKnown RBP17.81■□□□□ 0.44
CTNS-203ENST00000399306 C6orf106Q9H6K1 298 aaPredicted RBP17.81■□□□□ 0.44
CTNS-203ENST00000399306 SEPT10Q9P0V9 454 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 KLHL8Q9P2G9 620 aaPredicted RBP17.81■□□□□ 0.44
CTNS-203ENST00000399306 PILRBQ9UKJ0 227 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 DNPEPQ9ULA0 475 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 DRG1Q9Y295 367 aaKnown RBP17.81■□□□□ 0.44
CTNS-203ENST00000399306 R3HDM2Q9Y2K5 976 aaKnown RBP17.81■□□□□ 0.44
CTNS-203ENST00000399306 RAI2Q9Y5P3 530 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 RALGAPA1Q6GYQ0 2036 aa17.81■□□□□ 0.44
CTNS-203ENST00000399306 MEI4A8MW99 385 aa17.8■□□□□ 0.44
CTNS-203ENST00000399306 PRR5-ARHGAP8B1AHC4 643 aa17.8■□□□□ 0.44
CTNS-203ENST00000399306 RNGTTO60942 597 aaKnown RBP17.8■□□□□ 0.44
CTNS-203ENST00000399306 EPOP01588 193 aa17.8■□□□□ 0.44
CTNS-203ENST00000399306 IGHV4-34P06331 123 aa17.8■□□□□ 0.44
CTNS-203ENST00000399306 ITGAVP06756 1048 aa17.8■□□□□ 0.44
CTNS-203ENST00000399306 MMP2P08253 660 aa17.8■□□□□ 0.44
CTNS-203ENST00000399306 XPAP23025 273 aaPredicted RBP17.8■□□□□ 0.44
CTNS-203ENST00000399306 CD27P26842 260 aa17.8■□□□□ 0.44
CTNS-203ENST00000399306 PTGER3P43115 390 aa17.8■□□□□ 0.44
CTNS-203ENST00000399306 DHPSP49366 369 aaPredicted RBP17.8■□□□□ 0.44
CTNS-203ENST00000399306 RPS21P63220 83 aaKnown RBP17.8■□□□□ 0.44
CTNS-203ENST00000399306 SKOR1P84550 965 aa17.8■□□□□ 0.44
CTNS-203ENST00000399306 TRAF2Q12933 501 aa17.8■□□□□ 0.44
CTNS-203ENST00000399306 LONRF2Q1L5Z9 754 aa17.8■□□□□ 0.44
CTNS-203ENST00000399306 TMEM52BQ4KMG9 183 aa17.8■□□□□ 0.44
CTNS-203ENST00000399306 TMEM259Q4ZIN3 620 aa17.8■□□□□ 0.44
CTNS-203ENST00000399306 PID1Q7Z2X4 250 aa17.8■□□□□ 0.44
CTNS-203ENST00000399306 CYP2U1Q7Z449 544 aa17.8■□□□□ 0.44
CTNS-203ENST00000399306 PRPF39Q86UA1 669 aaKnown RBP17.8■□□□□ 0.44
CTNS-203ENST00000399306 HORMAD1Q86X24 394 aa17.8■□□□□ 0.44
CTNS-203ENST00000399306 RAVER1Q8IY67 606 aaKnown RBP17.8■□□□□ 0.44
CTNS-203ENST00000399306 BIRC7Q96CA5 298 aa17.8■□□□□ 0.44
CTNS-203ENST00000399306 TRIM44Q96DX7 344 aaPredicted RBP17.8■□□□□ 0.44
CTNS-203ENST00000399306 SPATA13Q96N96 652 aa17.8■□□□□ 0.44
CTNS-203ENST00000399306 MCCC1Q96RQ3 725 aaPredicted RBP17.8■□□□□ 0.44
CTNS-203ENST00000399306 TTLL3Q9Y4R7 772 aa17.8■□□□□ 0.44
CTNS-203ENST00000399306 PCDHGC4Q9Y5F7 938 aa17.8■□□□□ 0.44
CTNS-203ENST00000399306 EP300Q09472 2414 aaPredicted RBP17.8■□□□□ 0.44
CTNS-203ENST00000399306 ZFHX2Q9C0A1 2572 aaPredicted RBP17.79■□□□□ 0.44
CTNS-203ENST00000399306 A0A1W2PPC4 97 aa17.79■□□□□ 0.44
CTNS-203ENST00000399306 CTAGE9A4FU28 777 aa17.79■□□□□ 0.44
CTNS-203ENST00000399306 PGRMC1O00264 195 aaKnown RBP17.79■□□□□ 0.44
CTNS-203ENST00000399306 PLK4O00444 970 aa17.79■□□□□ 0.44
CTNS-203ENST00000399306 RIOK3O14730 519 aaKnown RBP17.79■□□□□ 0.44
CTNS-203ENST00000399306 KCNN4O15554 427 aa17.79■□□□□ 0.44
CTNS-203ENST00000399306 SPINT1O43278 529 aa17.79■□□□□ 0.44
CTNS-203ENST00000399306 GCATO75600 419 aa17.79■□□□□ 0.44
CTNS-203ENST00000399306 GJB3O75712 270 aa17.79■□□□□ 0.44
CTNS-203ENST00000399306 CPP00450 1065 aa17.79■□□□□ 0.44
CTNS-203ENST00000399306 TUBB4AP04350 444 aa17.79■□□□□ 0.44
CTNS-203ENST00000399306 CXCR5P32302 372 aa17.79■□□□□ 0.44
CTNS-203ENST00000399306 CD68P34810 354 aaPredicted RBP17.79■□□□□ 0.44
CTNS-203ENST00000399306 MMP12P39900 470 aa17.79■□□□□ 0.44
CTNS-203ENST00000399306 SETMARQ53H47 684 aaPredicted RBP17.79■□□□□ 0.44
CTNS-203ENST00000399306 PLA2G2CQ5R387 149 aa17.79■□□□□ 0.44
CTNS-203ENST00000399306 KLHDC8BQ8IXV7 354 aa17.79■□□□□ 0.44
CTNS-203ENST00000399306 FAM174AQ8TBP5 190 aa17.79■□□□□ 0.44
CTNS-203ENST00000399306 SCRN2Q96FV2 425 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms