RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 RPIAP49247 311 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 KLK7P49862 253 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 PEX5P50542 639 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 CDR2Q01850 454 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 PPARDQ03181 441 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 CYTH1Q15438 398 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 ALG11Q2TAA5 492 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 WSCD2Q2TBF2 565 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 INO80DQ53TQ3 878 aaPredicted RBP12.17□□□□□ -0.46
TFF3-202ENST00000398431 KCTD16Q68DU8 428 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 B3GNT8Q7Z7M8 397 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 MSANTD4Q8NCY6 345 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 WDR48Q8TAF3 677 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 NAT6Q93015 286 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 TSACCQ96A04 125 aaPredicted RBP12.17□□□□□ -0.46
TFF3-202ENST00000398431 TBC1D31Q96DN5 1066 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 EPAS1Q99814 870 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 WRAP53Q9BUR4 548 aaKnown RBP12.17□□□□□ -0.46
TFF3-202ENST00000398431 CPEB1Q9BZB8 566 aaKnown RBP12.17□□□□□ -0.46
TFF3-202ENST00000398431 SLC13A1Q9BZW2 595 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 COQ6Q9Y2Z9 468 aa12.17□□□□□ -0.46
TFF3-202ENST00000398431 CCDC187A0A096LP49 1063 aa12.16□□□□□ -0.46
TFF3-202ENST00000398431 TCRBV5S1A1TA0A578 114 aa12.16□□□□□ -0.46
TFF3-202ENST00000398431 ZSCAN5CA6NGD5 496 aaPredicted RBP12.16□□□□□ -0.46
TFF3-202ENST00000398431 EPHB6O15197 1021 aa12.16□□□□□ -0.46
TFF3-202ENST00000398431 HK3P52790 923 aa12.16□□□□□ -0.46
TFF3-202ENST00000398431 JAM2P57087 298 aa12.16□□□□□ -0.46
TFF3-202ENST00000398431 CCL7P80098 99 aa12.16□□□□□ -0.46
TFF3-202ENST00000398431 SPIDRQ14159 915 aa12.16□□□□□ -0.46
TFF3-202ENST00000398431 IRF4Q15306 451 aa12.16□□□□□ -0.46
TFF3-202ENST00000398431 TCP11X2Q5H9J9 407 aa12.16□□□□□ -0.46
TFF3-202ENST00000398431 ESRP1Q6NXG1 681 aaKnown RBP12.16□□□□□ -0.46
TFF3-202ENST00000398431 WDR59Q6PJI9 974 aa12.16□□□□□ -0.46
TFF3-202ENST00000398431 LVRNQ6Q4G3 990 aa12.16□□□□□ -0.46
TFF3-202ENST00000398431 CCDC81Q6ZN84 652 aa12.16□□□□□ -0.46
TFF3-202ENST00000398431 ZNF677Q86XU0 584 aa12.16□□□□□ -0.46
TFF3-202ENST00000398431 ARL14Q8N4G2 192 aa12.16□□□□□ -0.46
TFF3-202ENST00000398431 RTL3Q8N8U3 475 aaKnown RBP12.16□□□□□ -0.46
TFF3-202ENST00000398431 CXorf40AQ8TE69 158 aa12.16□□□□□ -0.46
TFF3-202ENST00000398431 FAM172AQ8WUF8 416 aa12.16□□□□□ -0.46
TFF3-202ENST00000398431 GLMNQ92990 594 aa12.16□□□□□ -0.46
TFF3-202ENST00000398431 NTAN1Q96AB6 310 aa12.16□□□□□ -0.46
TFF3-202ENST00000398431 FUBP1Q96AE4 644 aaKnown RBP12.16□□□□□ -0.46
TFF3-202ENST00000398431 CCDC97Q96F63 343 aaPredicted RBP12.16□□□□□ -0.46
TFF3-202ENST00000398431 MED8Q96G25 268 aa12.16□□□□□ -0.46
TFF3-202ENST00000398431 LIN37Q96GY3 246 aaPredicted RBP12.16□□□□□ -0.46
TFF3-202ENST00000398431 GDAP1L1Q96MZ0 367 aa12.16□□□□□ -0.46
TFF3-202ENST00000398431 C11orf70Q9BRQ4 267 aa12.16□□□□□ -0.46
TFF3-202ENST00000398431 EDEM3Q9BZQ6 932 aa12.16□□□□□ -0.46
TFF3-202ENST00000398431 GULP1Q9UBP9 304 aa12.16□□□□□ -0.46
TFF3-202ENST00000398431 LHX3Q9UBR4 397 aa12.16□□□□□ -0.46
TFF3-202ENST00000398431 LRP4O75096 1905 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 AHCTF1Q8WYP5 2266 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 TSPAN11A1L157 253 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 TMEM110-MUSTN1A8MSY1 372 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 WASH4PA8MWX3 477 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 RASA4BC9J798 803 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 PYCARD-AS1I3L0S3 204 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 RASA4O43374 803 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 BUB1BO60566 1050 aaPredicted RBP12.15□□□□□ -0.46
TFF3-202ENST00000398431 ITGA2BP08514 1039 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 KRT3P12035 628 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 SLC5A2P31639 672 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 GSCP56915 257 aaPredicted RBP12.15□□□□□ -0.46
TFF3-202ENST00000398431 YBEYP58557 167 aaPredicted RBP12.15□□□□□ -0.46
TFF3-202ENST00000398431 RAD51Q06609 339 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 SRSF6Q13247 344 aaKnown RBP12.15□□□□□ -0.46
TFF3-202ENST00000398431 SERINC3Q13530 473 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 LRRC14Q15048 493 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 AGERQ15109 404 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 UGP2Q16851 508 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 LINC00303Q3SY05 128 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 OGFOD3Q6PK18 319 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 ENPP7Q6UWV6 458 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 SLFN11Q7Z7L1 901 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 ZSWIM9Q86XI8 627 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 HID1Q8IV36 788 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 FSTL5Q8N475 847 aaPredicted RBP12.15□□□□□ -0.46
TFF3-202ENST00000398431 ARL10Q8N8L6 244 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 EXD3Q8N9H8 876 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 KYQ8NBH2 561 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 PCDH19Q8TAB3 1148 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 HCAR2Q8TDS4 363 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 CASKIN2Q8WXE0 1202 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 CCDC74AQ96AQ1 378 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 HMCESQ96FZ2 354 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 APOOQ9BUR5 198 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 CLSTN2Q9H4D0 955 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 SUV39H2Q9H5I1 410 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 TAB2Q9NYJ8 693 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 SIRPGQ9P1W8 387 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 PCDHGA7Q9Y5G6 932 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 SCN8AQ9UQD0 1980 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 PIEZO2Q9H5I5 2752 aa12.15□□□□□ -0.46
TFF3-202ENST00000398431 SIGLEC16A6NMB1 481 aa12.14□□□□□ -0.47
TFF3-202ENST00000398431 PES1O00541 588 aaKnown RBP12.14□□□□□ -0.47
TFF3-202ENST00000398431 PLD2O14939 933 aa12.14□□□□□ -0.47
TFF3-202ENST00000398431 PIGNO95427 931 aa12.14□□□□□ -0.47
TFF3-202ENST00000398431 IGSF6O95976 241 aa12.14□□□□□ -0.47
TFF3-202ENST00000398431 MBD3O95983 291 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms