RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 FSTL4Q6MZW2 842 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 MSANTD1Q6ZTZ1 278 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 ZNF765Q7L2R6 523 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 RTN4RL1Q86UN2 441 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-206ENST00000397617 KIAA1191Q96A73 305 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 HTATIP2Q9BUP3 242 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 ADAM33Q9BZ11 813 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 RNPEPL1Q9HAU8 725 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 NOP53Q9NZM5 478 aaKnown RBP5.91□□□□□ -1.46
PTPRD-206ENST00000397617 VWA7Q9Y334 891 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 BDP1A6H8Y1 2624 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-206ENST00000397617 I6L893 689 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-206ENST00000397617 PRMT5O14744 637 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-206ENST00000397617 OR1G1P47890 313 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 RPS6KA3P51812 740 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 NCALDP61601 193 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 ZNF177Q13360 481 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-206ENST00000397617 THOC5Q13769 683 aaKnown RBP5.91□□□□□ -1.46
PTPRD-206ENST00000397617 TAF1AQ15573 450 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-206ENST00000397617 SLC1A5Q15758 541 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 RPRD1AQ96P16 312 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-206ENST00000397617 CASD1Q96PB1 797 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 PANX3Q96QZ0 392 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 ELAC2Q9BQ52 826 aaKnown RBP5.91□□□□□ -1.46
PTPRD-206ENST00000397617 YIPF1Q9Y548 306 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 HEATR5BQ9P2D3 2071 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 ZBTB24O43167 697 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-206ENST00000397617 CCNT2O60583 730 aaKnown RBP5.91□□□□□ -1.46
PTPRD-206ENST00000397617 GRAP2O75791 330 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 CTSHP09668 335 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 THRAP10827 490 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 TMEM62Q0P6H9 643 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 GSTA3Q16772 222 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 DPY19L1Q2PZI1 675 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 LPCAT2Q7L5N7 544 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 CYP2U1Q7Z449 544 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 FITM2Q8N6M3 262 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 GLB1L3Q8NCI6 653 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-206ENST00000397617 FIBINQ8TAL6 211 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 SLC22A17Q8WUG5 538 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 PRICKLE1Q96MT3 831 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-206ENST00000397617 GOLGA2P5Q9HBQ8 144 aa5.91□□□□□ -1.46
PTPRD-206ENST00000397617 KDELR3O43731 214 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 KLK8O60259 260 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 KCNJ13O60928 360 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 MLYCDO95822 493 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 ENO1P06733 434 aaKnown RBP5.9□□□□□ -1.46
PTPRD-206ENST00000397617 CTGFP29279 349 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 AP1B1Q10567 949 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 GK3PQ14409 553 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 MBLAC2Q68D91 279 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 ZYG11AQ6WRX3 759 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 FBXO15Q8NCQ5 510 aaPredicted RBP5.9□□□□□ -1.46
PTPRD-206ENST00000397617 GRIN3AQ8TCU5 1115 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 DEPDC1BQ8WUY9 529 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 L3HYPDHQ96EM0 354 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 ZNF512Q96ME7 567 aaPredicted RBP5.9□□□□□ -1.46
PTPRD-206ENST00000397617 SLC25A23Q9BV35 468 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 SLC8A2Q9UPR5 921 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 WASH3PC4AMC7 463 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 GJB5O95377 273 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 SLCO1A2P46721 670 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 ACTR3P61158 418 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 PRAMEP78395 509 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 FXNQ16595 210 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 KLC4Q9NSK0 619 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 TRMT13Q9NUP7 481 aaKnown RBP5.9□□□□□ -1.46
PTPRD-206ENST00000397617 NDUFA13Q9P0J0 144 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 ASCC3Q8N3C0 2202 aaKnown RBP5.9□□□□□ -1.46
PTPRD-206ENST00000397617 PCM1Q15154 2024 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 TRBV5-4A0A0C4DH59 114 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 UBA6A0AVT1 1052 aaPredicted RBP5.9□□□□□ -1.46
PTPRD-206ENST00000397617 VPS26AO75436 327 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 CLTBP09497 229 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 DDX5P17844 614 aaKnown RBP5.9□□□□□ -1.46
PTPRD-206ENST00000397617 BRCC3P46736 316 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 TLE2Q04725 743 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 MMRN1Q13201 1228 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 CYB5D1Q6P9G0 228 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 CHSY3Q70JA7 882 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 CYP4X1Q8N118 509 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 OR52E4Q8NGH9 312 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 CASP10Q92851 521 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 HINFPQ9BQA5 517 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 SLC39A8Q9C0K1 460 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 NOL6Q9H6R4 1146 aaKnown RBP5.9□□□□□ -1.46
PTPRD-206ENST00000397617 SNX15Q9NRS6 342 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 CHORDC1Q9UHD1 332 aaPredicted RBP5.9□□□□□ -1.46
PTPRD-206ENST00000397617 GMEB1Q9Y692 573 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 GBF1Q92538 1859 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 TRPA1O75762 1119 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 RPP40O75818 363 aaKnown RBP5.9□□□□□ -1.46
PTPRD-206ENST00000397617 CYBBP04839 570 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 PGM2L1Q6PCE3 622 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 ACAD11Q709F0 780 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 CILP2Q8IUL8 1156 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 KCNV2Q8TDN2 545 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 NMUR1Q9HB89 426 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 CHKBQ9Y259 395 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms