RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 CACNA2D2Q9NY47 1150 aa10.84□□□□□ -0.67
CCDC40-204ENST00000397545 C6orf203Q9P0P8 240 aaPredicted RBP10.84□□□□□ -0.67
CCDC40-204ENST00000397545 PCDHB8Q9UN66 801 aa10.84□□□□□ -0.67
CCDC40-204ENST00000397545 KCNU1A8MYU2 1149 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 TMEM114B3SHH9 223 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 RAD51BO15315 384 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 MAP3K13O43283 966 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 PLIN3O60664 434 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 NR4A1P22736 598 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 YWHAQP27348 245 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 ADRA1BP35368 520 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 ALDH9A1P49189 494 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 HK2P52789 917 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 ZNF280AP59817 542 aaPredicted RBP10.83□□□□□ -0.68
CCDC40-204ENST00000397545 CYP1B1Q16678 543 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 CXCL17Q6UXB2 119 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 BANPQ8N9N5 519 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 SPATA22Q8NHS9 363 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 GPR152Q8TDT2 470 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 CIPCQ9C0C6 399 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 CEP44Q9C0F1 390 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 LHX5Q9H2C1 402 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 ZNF214Q9UL59 606 aaPredicted RBP10.83□□□□□ -0.68
CCDC40-204ENST00000397545 CLCA2Q9UQC9 943 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 SNX8Q9Y5X2 465 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 H0YGN5 161 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 RGS20O76081 388 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 FARP2O94887 1054 aaPredicted RBP10.83□□□□□ -0.68
CCDC40-204ENST00000397545 HOXD10P28358 340 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 HTRA3P83110 453 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 HSPA14Q0VDF9 509 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 HIST2H2ACQ16777 129 aaPredicted RBP10.83□□□□□ -0.68
CCDC40-204ENST00000397545 ARMC4Q5T2S8 1044 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 HIST2H2AA3Q6FI13 130 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 ZNF280DQ6N043 979 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 SLC39A4Q6P5W5 647 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 TMC5Q6UXY8 1006 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 ERLEC1Q96DZ1 483 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 ADAM2Q99965 735 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 MRPL57Q9BQC6 102 aaKnown RBP10.83□□□□□ -0.68
CCDC40-204ENST00000397545 GORASP1Q9BQQ3 440 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 CATSPERZQ9NTU4 200 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 EFR3BQ9Y2G0 817 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 NFS1Q9Y697 457 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 KNL1Q8NG31 2342 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 TSC22D2O75157 780 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 CILPO75339 1184 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 MAGP20916 626 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 ABL2P42684 1182 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 MRPS5P82675 430 aaKnown RBP10.83□□□□□ -0.68
CCDC40-204ENST00000397545 GRM3Q14832 879 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 CA9Q16790 459 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 PITRM1Q5JRX3 1037 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 RSBN1Q5VWQ0 802 aaPredicted RBP10.83□□□□□ -0.68
CCDC40-204ENST00000397545 LCLAT1Q6UWP7 414 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 ZNF410Q86VK4 478 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 TRIM69Q86WT6 500 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 RIOX2Q8IUF8 465 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 ZNF614Q8N883 585 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 PCDH19Q8TAB3 1148 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 C10orf82Q8WW14 230 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 LPGAT1Q92604 370 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 C7orf26Q96N11 449 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 UGT2B28Q9BY64 529 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 POLR1EQ9GZS1 481 aaKnown RBP10.83□□□□□ -0.68
CCDC40-204ENST00000397545 EBF3Q9H4W6 596 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 TRPC4Q9UBN4 977 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 ADAM28Q9UKQ2 775 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 DOLKQ9UPQ8 538 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 MTF2Q9Y483 593 aaPredicted RBP10.83□□□□□ -0.68
CCDC40-204ENST00000397545 TRAF6Q9Y4K3 522 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 PCDHB5Q9Y5E4 795 aa10.83□□□□□ -0.68
CCDC40-204ENST00000397545 NRP2O60462 931 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 IMPDH2P12268 514 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 ZNF7P17097 686 aaPredicted RBP10.82□□□□□ -0.68
CCDC40-204ENST00000397545 IL1R2P27930 398 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 TPP2P29144 1249 aaPredicted RBP10.82□□□□□ -0.68
CCDC40-204ENST00000397545 HADHBP55084 474 aaKnown RBP10.82□□□□□ -0.68
CCDC40-204ENST00000397545 PLEKHM3Q6ZWE6 761 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 ANKS1BQ7Z6G8 1248 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 C8orf59Q8N0T1 100 aaPredicted RBP10.82□□□□□ -0.68
CCDC40-204ENST00000397545 PTCD3Q96EY7 689 aaKnown RBP10.82□□□□□ -0.68
CCDC40-204ENST00000397545 ABHD8Q96I13 439 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 ZFP42Q96MM3 310 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 RHOJQ9H4E5 214 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 TLR8Q9NR97 1041 aaKnown RBP10.82□□□□□ -0.68
CCDC40-204ENST00000397545 KRT84Q9NSB2 600 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 UXTQ9UBK9 157 aaPredicted RBP10.82□□□□□ -0.68
CCDC40-204ENST00000397545 STK39Q9UEW8 545 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 SLC7A8Q9UHI5 535 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 PADI4Q9UM07 663 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 VWA7Q9Y334 891 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 ANKRD12Q6UB98 2062 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 A0A087X1B8 175 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 MSI1O43347 362 aaKnown RBP10.82□□□□□ -0.68
CCDC40-204ENST00000397545 B4GALT4O60513 344 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 MTA2O94776 668 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 METTL18O95568 372 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 ZNF37AP17032 561 aaPredicted RBP10.82□□□□□ -0.68
CCDC40-204ENST00000397545 PIK3CGP48736 1102 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms