RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 SPATA17Q96L03 361 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 APBA2Q99767 749 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 PSD2Q9BQI7 771 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 TDRD1Q9BXT4 1180 aaKnown RBP5.07□□□□□ -1.6
SSR1-202ENST00000397511 ULBP1Q9BZM6 244 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 MROH8Q9H579 483 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 SNX15Q9NRS6 342 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 IARS2Q9NSE4 1012 aaKnown RBP5.07□□□□□ -1.6
SSR1-202ENST00000397511 C20orf96Q9NUD7 363 aaPredicted RBP5.07□□□□□ -1.6
SSR1-202ENST00000397511 THAP1Q9NVV9 213 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 MOCS1Q9NZB8 636 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 SLC8A2Q9UPR5 921 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 WDR90Q96KV7 1748 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.07□□□□□ -1.6
SSR1-202ENST00000397511 A0A087WXM4 84 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 MYBPHLA2RUH7 354 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 J3QRK9 145 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 TRDMT1O14717 391 aaKnown RBP5.07□□□□□ -1.6
SSR1-202ENST00000397511 TEX28O15482 410 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 PLIN3O60664 434 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 MOCS2O96007 188 aaPredicted RBP5.07□□□□□ -1.6
SSR1-202ENST00000397511 JCHAINP01591 159 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 POLBP06746 335 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 INHBBP09529 407 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 TTKP33981 857 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 BMXP51813 675 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 NDST2P52849 883 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 LILRA4P59901 499 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 ADAM17P78536 824 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 TXNL4AP83876 142 aaKnown RBP5.07□□□□□ -1.6
SSR1-202ENST00000397511 CTBP1Q13363 440 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 DGKDQ16760 1214 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 SLC9B1Q4ZJI4 515 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 TEDDM1Q5T9Z0 273 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 PDPK2PQ6A1A2 396 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 FRMD7Q6ZUT3 714 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 SLC26A9Q7LBE3 791 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 PTAR1Q7Z6K3 402 aaPredicted RBP5.07□□□□□ -1.6
SSR1-202ENST00000397511 SETD3Q86TU7 594 aaPredicted RBP5.07□□□□□ -1.6
SSR1-202ENST00000397511 TICAM1Q8IUC6 712 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 CHERPQ8IWX8 916 aaKnown RBP5.07□□□□□ -1.6
SSR1-202ENST00000397511 ATP6V0D2Q8N8Y2 350 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 MINDY2Q8NBR6 621 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 FAM156AQ8NDB6 213 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 MAPK15Q8TD08 544 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 FBXL8Q96CD0 374 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 ERLEC1Q96DZ1 483 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 CERS2Q96G23 380 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 QKIQ96PU8 341 aaKnown RBP eCLIP5.07□□□□□ -1.61e-17■■■■■ 38
SSR1-202ENST00000397511 OR52B2Q96RD2 323 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 SERPINI1Q99574 410 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 RETREG1Q9H6L5 497 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 TASP1Q9H6P5 420 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 VRTNQ9H8Y1 702 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 COG4Q9H9E3 785 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 COPS7BQ9H9Q2 264 aaPredicted RBP5.07□□□□□ -1.6
SSR1-202ENST00000397511 MOV10Q9HCE1 1003 aaKnown RBP5.07□□□□□ -1.6
SSR1-202ENST00000397511 SACM1LQ9NTJ5 587 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 CNOT11Q9UKZ1 510 aaKnown RBP5.07□□□□□ -1.6
SSR1-202ENST00000397511 VANGL2Q9ULK5 521 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 FZD10Q9ULW2 581 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 SLC30A1Q9Y6M5 507 aa5.07□□□□□ -1.6
SSR1-202ENST00000397511 A0A096LPK6 155 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 CCL15-CCL14A0A0B4J2E2 113 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 A0A1B0GTW7 788 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 TTC24A2A3L6 582 aaPredicted RBP5.06□□□□□ -1.6
SSR1-202ENST00000397511 CENPBD1B2RD01 187 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 TMEM233B4DJY2 109 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 CCL22O00626 93 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 JUNP05412 331 aaKnown RBP5.06□□□□□ -1.6
SSR1-202ENST00000397511 MYL3P08590 195 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 SMIM10L2AP0DMW4 78 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 SMIM10L2BP0DMW5 78 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 TSPAN8P19075 237 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 NFKB1P19838 968 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 NMBRP28336 390 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 SOX11P35716 441 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 TAF6P49848 677 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 IDH3AP50213 366 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 CLCNKBP51801 687 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 TPI1P60174 286 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 SEMA5AQ13591 1074 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 PCSK7Q16549 785 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 CCL15Q16663 113 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 SLC25A52Q3SY17 297 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 NOMO2Q5JPE7 1267 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 CLEC20AQ6ZU45 233 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 DENND6AQ8IWF6 608 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 CCNYL1Q8N7R7 359 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 MED30Q96HR3 178 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 MAELQ96JY0 434 aaKnown RBP5.06□□□□□ -1.6
SSR1-202ENST00000397511 CEP295NLQ96MC4 621 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 ZNF512Q96ME7 567 aaPredicted RBP5.06□□□□□ -1.6
SSR1-202ENST00000397511 C1orf50Q9BV19 199 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 OSBPL11Q9BXB4 747 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 FTHL17Q9BXU8 183 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 RPF2Q9H7B2 306 aaKnown RBP5.06□□□□□ -1.6
SSR1-202ENST00000397511 PNPLA8Q9NP80 782 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 COPG2Q9UBF2 871 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 CPA4Q9UI42 421 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms