RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 TMEM109Q9BVC6 243 aa27.72■■■□□ 2.03
CPNE1-203ENST00000397442 ACSS3Q9H6R3 686 aa27.72■■■□□ 2.03
CPNE1-203ENST00000397442 PLA2G4CQ9UP65 541 aa27.72■■■□□ 2.03
CPNE1-203ENST00000397442 MYO10Q9HD67 2058 aa27.71■■■□□ 2.03
CPNE1-203ENST00000397442 BNIP3LO60238 219 aa27.71■■■□□ 2.03
CPNE1-203ENST00000397442 ASGR2P07307 311 aa27.71■■■□□ 2.03
CPNE1-203ENST00000397442 ALADP13716 330 aa27.71■■■□□ 2.03
CPNE1-203ENST00000397442 IFFO1Q0D2I5 559 aa27.71■■■□□ 2.03
CPNE1-203ENST00000397442 STAT4Q14765 748 aa27.71■■■□□ 2.03
CPNE1-203ENST00000397442 CHST14Q8NCH0 376 aa27.71■■■□□ 2.03
CPNE1-203ENST00000397442 CPEB1Q9BZB8 566 aaKnown RBP27.71■■■□□ 2.03
CPNE1-203ENST00000397442 MTG2Q9H4K7 406 aa27.71■■■□□ 2.03
CPNE1-203ENST00000397442 TCAF1Q9Y4C2 921 aa27.71■■■□□ 2.03
CPNE1-203ENST00000397442 RPS6KL1Q9Y6S9 549 aa27.71■■■□□ 2.03
CPNE1-203ENST00000397442 WASH3PC4AMC7 463 aa27.7■■■□□ 2.02
CPNE1-203ENST00000397442 SOCS5O75159 536 aa27.7■■■□□ 2.02
CPNE1-203ENST00000397442 POP4O95707 220 aaKnown RBP27.7■■■□□ 2.02
CPNE1-203ENST00000397442 POLBP06746 335 aa27.7■■■□□ 2.02
CPNE1-203ENST00000397442 GALK1P51570 392 aa27.7■■■□□ 2.02
CPNE1-203ENST00000397442 BCL2L1Q07817 233 aa27.7■■■□□ 2.02
CPNE1-203ENST00000397442 ANKRD20A4Q4UJ75 823 aa27.7■■■□□ 2.02
CPNE1-203ENST00000397442 PKN3Q6P5Z2 889 aa27.7■■■□□ 2.02
CPNE1-203ENST00000397442 TRMT10BQ6PF06 316 aaKnown RBP27.7■■■□□ 2.02
CPNE1-203ENST00000397442 PTPRN2Q92932 1015 aa27.7■■■□□ 2.02
CPNE1-203ENST00000397442 MFSD3Q96ES6 412 aa27.7■■■□□ 2.02
CPNE1-203ENST00000397442 TUBGCP5Q96RT8 1024 aa27.7■■■□□ 2.02
CPNE1-203ENST00000397442 RANBP9Q96S59 729 aa27.7■■■□□ 2.02
CPNE1-203ENST00000397442 RUFY1Q96T51 708 aa27.7■■■□□ 2.02
CPNE1-203ENST00000397442 ATP13A3Q9H7F0 1226 aa27.7■■■□□ 2.02
CPNE1-203ENST00000397442 MOCS1Q9NZB8 636 aa27.7■■■□□ 2.02
CPNE1-203ENST00000397442 PRKAG3Q9UGI9 489 aa27.7■■■□□ 2.02
CPNE1-203ENST00000397442 PCDHB9Q9Y5E1 797 aa27.7■■■□□ 2.02
CPNE1-203ENST00000397442 ZCWPW2A0A1B0GU75 182 aa27.69■■■□□ 2.02
CPNE1-203ENST00000397442 TCEA3O75764 348 aa27.69■■■□□ 2.02
CPNE1-203ENST00000397442 USP1O94782 785 aa27.69■■■□□ 2.02
CPNE1-203ENST00000397442 ALDH1A2O94788 518 aa27.69■■■□□ 2.02
CPNE1-203ENST00000397442 PGLSO95336 258 aa27.69■■■□□ 2.02
CPNE1-203ENST00000397442 SYF2O95926 243 aaKnown RBP27.69■■■□□ 2.02
CPNE1-203ENST00000397442 PRKCGP05129 697 aa27.69■■■□□ 2.02
CPNE1-203ENST00000397442 CA4P22748 312 aa27.69■■■□□ 2.02
CPNE1-203ENST00000397442 ADRA1DP25100 572 aa27.69■■■□□ 2.02
CPNE1-203ENST00000397442 CTHP32929 405 aa27.69■■■□□ 2.02
CPNE1-203ENST00000397442 ST8SIA6P61647 398 aa27.69■■■□□ 2.02
CPNE1-203ENST00000397442 TFF2Q03403 129 aa27.69■■■□□ 2.02
CPNE1-203ENST00000397442 ZNF234Q14588 700 aa27.69■■■□□ 2.02
CPNE1-203ENST00000397442 PREPLQ4J6C6 727 aaPredicted RBP27.69■■■□□ 2.02
CPNE1-203ENST00000397442 TXNDC11Q6PKC3 985 aa27.69■■■□□ 2.02
CPNE1-203ENST00000397442 UNC5BQ8IZJ1 945 aa27.69■■■□□ 2.02
CPNE1-203ENST00000397442 ZNF366Q8N895 744 aa27.69■■■□□ 2.02
CPNE1-203ENST00000397442 LPCAT1Q8NF37 534 aa27.69■■■□□ 2.02
CPNE1-203ENST00000397442 EPS8L3Q8TE67 593 aaKnown RBP27.69■■■□□ 2.02
CPNE1-203ENST00000397442 PDCD6IPQ8WUM4 868 aaKnown RBP27.69■■■□□ 2.02
CPNE1-203ENST00000397442 PTCD2Q8WV60 388 aaKnown RBP27.69■■■□□ 2.02
CPNE1-203ENST00000397442 SMIM14Q96QK8 99 aa27.69■■■□□ 2.02
CPNE1-203ENST00000397442 ADGRE3Q9BY15 652 aa27.69■■■□□ 2.02
CPNE1-203ENST00000397442 MRM3Q9HC36 420 aaKnown RBP27.69■■■□□ 2.02
CPNE1-203ENST00000397442 FAM53CQ9NYF3 392 aa27.69■■■□□ 2.02
CPNE1-203ENST00000397442 SLC8A2Q9UPR5 921 aa27.69■■■□□ 2.02
CPNE1-203ENST00000397442 ANKRD66B4E2M5 251 aa27.68■■■□□ 2.02
CPNE1-203ENST00000397442 SPECC1L-ADORA2AF8WAN1 911 aa27.68■■■□□ 2.02
CPNE1-203ENST00000397442 PIAS1O75925 651 aa27.68■■■□□ 2.02
CPNE1-203ENST00000397442 APODP05090 189 aa27.68■■■□□ 2.02
CPNE1-203ENST00000397442 NMBRP28336 390 aa27.68■■■□□ 2.02
CPNE1-203ENST00000397442 EFTUD2Q15029 972 aaKnown RBP eCLIP27.68■■■□□ 2.026e-8■■■■□ 26.4
CPNE1-203ENST00000397442 LONRF1Q17RB8 773 aa27.68■■■□□ 2.02
CPNE1-203ENST00000397442 SPANXN3Q5MJ09 141 aa27.68■■■□□ 2.02
CPNE1-203ENST00000397442 ARMC12Q5T9G4 340 aa27.68■■■□□ 2.02
CPNE1-203ENST00000397442 ARMC3Q5W041 872 aa27.68■■■□□ 2.02
CPNE1-203ENST00000397442 CYS1Q717R9 158 aa27.68■■■□□ 2.02
CPNE1-203ENST00000397442 PPHLN1Q8NEY8 458 aaKnown RBP27.68■■■□□ 2.02
CPNE1-203ENST00000397442 PIH1D2Q8WWB5 315 aa27.68■■■□□ 2.02
CPNE1-203ENST00000397442 EZH1Q92800 747 aaPredicted RBP27.68■■■□□ 2.02
CPNE1-203ENST00000397442 RMDN1Q96DB5 314 aa27.68■■■□□ 2.02
CPNE1-203ENST00000397442 P2RY13Q9BPV8 354 aa27.68■■■□□ 2.02
CPNE1-203ENST00000397442 TMEM245Q9H330 911 aa27.68■■■□□ 2.02
CPNE1-203ENST00000397442 IL9P15248 144 aa27.68■■■□□ 2.02
CPNE1-203ENST00000397442 PRKCHP24723 683 aa27.68■■■□□ 2.02
CPNE1-203ENST00000397442 GCAP28676 217 aa27.68■■■□□ 2.02
CPNE1-203ENST00000397442 STX2P32856 288 aa27.68■■■□□ 2.02
CPNE1-203ENST00000397442 QPCTQ16769 361 aa27.68■■■□□ 2.02
CPNE1-203ENST00000397442 FNDC3BQ53EP0 1204 aaKnown RBP27.68■■■□□ 2.02
CPNE1-203ENST00000397442 ZNF669Q96BR6 464 aaPredicted RBP27.68■■■□□ 2.02
CPNE1-203ENST00000397442 ROPN1BQ9BZX4 212 aaPredicted RBP27.68■■■□□ 2.02
CPNE1-203ENST00000397442 ZDHHC6Q9H6R6 413 aa27.68■■■□□ 2.02
CPNE1-203ENST00000397442 ROPN1Q9HAT0 212 aaPredicted RBP27.68■■■□□ 2.02
CPNE1-203ENST00000397442 THAP10Q9P2Z0 257 aaPredicted RBP27.68■■■□□ 2.02
CPNE1-203ENST00000397442 SPO11Q9Y5K1 396 aa27.68■■■□□ 2.02
CPNE1-203ENST00000397442 FAM169AQ9Y6X4 670 aa27.68■■■□□ 2.02
CPNE1-203ENST00000397442 TCF20Q9UGU0 1960 aaKnown RBP27.67■■■□□ 2.02
CPNE1-203ENST00000397442 MROH6A6NGR9 719 aa27.67■■■□□ 2.02
CPNE1-203ENST00000397442 PIRTP0C851 137 aa27.67■■■□□ 2.02
CPNE1-203ENST00000397442 SERPINA4P29622 427 aa27.67■■■□□ 2.02
CPNE1-203ENST00000397442 SLC8A1P32418 973 aa27.67■■■□□ 2.02
CPNE1-203ENST00000397442 KBTBD12Q3ZCT8 623 aa27.67■■■□□ 2.02
CPNE1-203ENST00000397442 ZSWIM9Q86XI8 627 aa27.67■■■□□ 2.02
CPNE1-203ENST00000397442 UCMAQ8WVF2 138 aa27.67■■■□□ 2.02
CPNE1-203ENST00000397442 DNASE1L2Q92874 299 aa27.67■■■□□ 2.02
CPNE1-203ENST00000397442 ECHDC3Q96DC8 303 aa27.67■■■□□ 2.02
CPNE1-203ENST00000397442 SMYD2Q9NRG4 433 aa27.67■■■□□ 2.02
CPNE1-203ENST00000397442 HEBP1Q9NRV9 189 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms