RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 HCN2Q9UL51 889 aa17.11■□□□□ 0.33
TSPAN4-205ENST00000397406 LOC285095A0A1B0GVY8 99 aa17.1■□□□□ 0.33
TSPAN4-205ENST00000397406 TTC34A8MYJ7 566 aa17.1■□□□□ 0.33
TSPAN4-205ENST00000397406 MAN2B1O00754 1011 aa17.1■□□□□ 0.33
TSPAN4-205ENST00000397406 NNMTP40261 264 aa17.1■□□□□ 0.33
TSPAN4-205ENST00000397406 AP1S1P61966 158 aa17.1■□□□□ 0.33
TSPAN4-205ENST00000397406 SNRPD1P62314 119 aaKnown RBP17.1■□□□□ 0.33
TSPAN4-205ENST00000397406 CSTF1Q05048 431 aaKnown RBP17.1■□□□□ 0.33
TSPAN4-205ENST00000397406 PDIA2Q13087 525 aaKnown RBP17.1■□□□□ 0.33
TSPAN4-205ENST00000397406 FASTKD3Q14CZ7 662 aaKnown RBP17.1■□□□□ 0.33
TSPAN4-205ENST00000397406 BBS9Q3SYG4 887 aa17.1■□□□□ 0.33
TSPAN4-205ENST00000397406 ACCSLQ4AC99 568 aa17.1■□□□□ 0.33
TSPAN4-205ENST00000397406 RALGPS2Q86X27 583 aaPredicted RBP17.1■□□□□ 0.33
TSPAN4-205ENST00000397406 PLPP6Q8IY26 295 aa17.1■□□□□ 0.33
TSPAN4-205ENST00000397406 MREGQ8N565 214 aa17.1■□□□□ 0.33
TSPAN4-205ENST00000397406 SUMF1Q8NBK3 374 aa17.1■□□□□ 0.33
TSPAN4-205ENST00000397406 FEM1CQ96JP0 617 aa17.1■□□□□ 0.33
TSPAN4-205ENST00000397406 FSD1LQ9BXM9 530 aa17.1■□□□□ 0.33
TSPAN4-205ENST00000397406 C8orf33Q9H7E9 229 aaPredicted RBP17.1■□□□□ 0.33
TSPAN4-205ENST00000397406 SAYSD1Q9NPB0 183 aa17.1■□□□□ 0.33
TSPAN4-205ENST00000397406 EVLQ9UI08 416 aaPredicted RBP17.1■□□□□ 0.33
TSPAN4-205ENST00000397406 FBXO4Q9UKT5 387 aa17.1■□□□□ 0.33
TSPAN4-205ENST00000397406 CKAP5Q14008 2032 aa17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 GPR179Q6PRD1 2367 aa17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 ANTXRLA6NF34 631 aa17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 ALOX15BO15296 676 aa17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 LAMTOR5O43504 91 aa17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 MAGEA4P43358 317 aa17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 MAPK8P45983 427 aa17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 PMS2P54278 862 aa17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 ZNF234Q14588 700 aa17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 ZNF528Q3MIS6 628 aa17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 CARD16Q5EG05 197 aa17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 Q6ZS52 159 aa17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 Q6ZVU0 165 aa17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 ZBTB44Q8NCP5 570 aa17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 OR6K2Q8NGY2 324 aa17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 UCMAQ8WVF2 138 aa17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 EZH1Q92800 747 aaPredicted RBP17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 SIGLEC10Q96LC7 697 aa17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 TRIB3Q96RU7 358 aa17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 TDRD1Q9BXT4 1180 aaKnown RBP17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 CDC42EP4Q9H3Q1 356 aaKnown RBP17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 ARNT2Q9HBZ2 717 aa17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 PIH1D1Q9NWS0 290 aaKnown RBP17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 THAP10Q9P2Z0 257 aaPredicted RBP17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 PLA2G4CQ9UP65 541 aa17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 MRPS17Q9Y2R5 130 aaKnown RBP17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 STARD13Q9Y3M8 1113 aa17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 TEX264Q9Y6I9 313 aa17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 RIF1Q5UIP0 2472 aaKnown RBP17.09■□□□□ 0.33
TSPAN4-205ENST00000397406 FRYLO94915 3013 aa17.08■□□□□ 0.33
TSPAN4-205ENST00000397406 EPOP01588 193 aa17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 ATXN1LP0C7T5 689 aaKnown RBP17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 CHRM1P11229 460 aaPredicted RBP17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 MAGEA9P43362 315 aa17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 TNFRSF4P43489 277 aa17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 CHRNA4P43681 627 aa17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 TNNT3P45378 269 aaPredicted RBP17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 CCNHP51946 323 aaPredicted RBP17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 SESN2P58004 480 aaPredicted RBP17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 ST8SIA6P61647 398 aa17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 CDK18Q07002 472 aa17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 CDH17Q12864 832 aa17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 TRAF2Q12933 501 aa17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 SLC1A5Q15758 541 aa17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 UAP1Q16222 522 aaPredicted RBP17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 MYLK3Q32MK0 819 aa17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 FNDC3BQ53EP0 1204 aaKnown RBP17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 DNAJC21Q5F1R6 531 aaKnown RBP17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 UBAP2Q5T6F2 1119 aaKnown RBP17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 MAMSTRQ6ZN01 415 aa17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 DPY19L3Q6ZPD9 716 aa17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 NUDT18Q6ZVK8 323 aa17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 KDELC2Q7Z4H8 507 aa17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 ZBED8Q8IZ13 594 aa17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 OR2A12Q8NGT7 310 aa17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 LRRC39Q96DD0 335 aa17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 TMEM245Q9H330 911 aa17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 SEMA4AQ9H3S1 761 aa17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 SLC8A2Q9UPR5 921 aa17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 PCDHGC4Q9Y5F7 938 aa17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 RAI2Q9Y5P3 530 aa17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 DCHS1Q96JQ0 3298 aa17.08■□□□□ 0.32
TSPAN4-205ENST00000397406 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 WASH3PC4AMC7 463 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 K7EQS6 105 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 AP3B1O00203 1094 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 FZD6O60353 706 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 LILRB5O75023 590 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 PRLP01236 227 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 LMNAP02545 664 aaKnown RBP17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 HNRNPLP14866 589 aaKnown RBP eCLIP17.07■□□□□ 0.325e-7■□□□□ 11.2
TSPAN4-205ENST00000397406 MGAT1P26572 445 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 GKP32189 559 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 ELK3P41970 407 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 SATB1Q01826 763 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 PON2Q15165 354 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 SIRPB2Q5JXA9 342 aa17.07■□□□□ 0.32
TSPAN4-205ENST00000397406 HP1BP3Q5SSJ5 553 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms