RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 SLC12A9Q9BXP2 914 aa15.14■□□□□ 0.01
SEC13-206ENST00000397102 PPARGC1AQ9UBK2 798 aaKnown RBP15.14■□□□□ 0.01
SEC13-206ENST00000397102 TUBD1Q9UJT1 453 aa15.14■□□□□ 0.01
SEC13-206ENST00000397102 ZDHHC9Q9Y397 364 aa15.14■□□□□ 0.01
SEC13-206ENST00000397102 RNF215Q9Y6U7 377 aa15.14■□□□□ 0.01
SEC13-206ENST00000397102 LRRK2Q5S007 2527 aa15.13■□□□□ 0.01
SEC13-206ENST00000397102 AGRPO00253 132 aa15.13■□□□□ 0.01
SEC13-206ENST00000397102 GNA14O95837 355 aa15.13■□□□□ 0.01
SEC13-206ENST00000397102 ACVRL1P37023 503 aa15.13■□□□□ 0.01
SEC13-206ENST00000397102 SRP54P61011 504 aaKnown RBP15.13■□□□□ 0.01
SEC13-206ENST00000397102 KCNAB2Q13303 367 aa15.13■□□□□ 0.01
SEC13-206ENST00000397102 SERINC3Q13530 473 aa15.13■□□□□ 0.01
SEC13-206ENST00000397102 LRRC14Q15048 493 aa15.13■□□□□ 0.01
SEC13-206ENST00000397102 ARHGAP44Q17R89 818 aa15.13■□□□□ 0.01
SEC13-206ENST00000397102 SKIDA1Q1XH10 827 aa15.13■□□□□ 0.01
SEC13-206ENST00000397102 MYLK3Q32MK0 819 aa15.13■□□□□ 0.01
SEC13-206ENST00000397102 SLC25A52Q3SY17 297 aa15.13■□□□□ 0.01
SEC13-206ENST00000397102 CERCAMQ5T4B2 595 aa15.13■□□□□ 0.01
SEC13-206ENST00000397102 TMEM164Q5U3C3 297 aa15.13■□□□□ 0.01
SEC13-206ENST00000397102 GJB7Q6PEY0 223 aa15.13■□□□□ 0.01
SEC13-206ENST00000397102 TRIM65Q6PJ69 517 aa15.13■□□□□ 0.01
SEC13-206ENST00000397102 OGFOD3Q6PK18 319 aa15.13■□□□□ 0.01
SEC13-206ENST00000397102 ENPP7Q6UWV6 458 aa15.13■□□□□ 0.01
SEC13-206ENST00000397102 GDPD4Q6W3E5 623 aa15.13■□□□□ 0.01
SEC13-206ENST00000397102 RD3Q7Z3Z2 195 aa15.13■□□□□ 0.01
SEC13-206ENST00000397102 SPRED1Q7Z699 444 aa15.13■□□□□ 0.01
SEC13-206ENST00000397102 ATL2Q8NHH9 583 aa15.13■□□□□ 0.01
SEC13-206ENST00000397102 SHC3Q92529 594 aa15.13■□□□□ 0.01
SEC13-206ENST00000397102 RBM15Q96T37 977 aaKnown RBP eCLIP15.13■□□□□ 0.018e-6■■□□□ 12.8
SEC13-206ENST00000397102 KLQ9UEF7 1012 aa15.13■□□□□ 0.01
SEC13-206ENST00000397102 ANAPC2Q9UJX6 822 aa15.13■□□□□ 0.01
SEC13-206ENST00000397102 ANKRD36A6QL64 1941 aa15.13■□□□□ 0.01
SEC13-206ENST00000397102 BICDL2A1A5D9 508 aa15.12■□□□□ 0.01
SEC13-206ENST00000397102 STMND1H3BQB6 276 aa15.12■□□□□ 0.01
SEC13-206ENST00000397102 SCNN1AP37088 669 aa15.12■□□□□ 0.01
SEC13-206ENST00000397102 CASRP41180 1078 aa15.12■□□□□ 0.01
SEC13-206ENST00000397102 ATP1A2P50993 1020 aa15.12■□□□□ 0.01
SEC13-206ENST00000397102 POLE2P56282 527 aa15.12■□□□□ 0.01
SEC13-206ENST00000397102 PTK2Q05397 1052 aa15.12■□□□□ 0.01
SEC13-206ENST00000397102 TMEM52BQ4KMG9 183 aa15.12■□□□□ 0.01
SEC13-206ENST00000397102 PHF19Q5T6S3 580 aa15.12■□□□□ 0.01
SEC13-206ENST00000397102 KLHL10Q6JEL2 608 aa15.12■□□□□ 0.01
SEC13-206ENST00000397102 TMPRSS9Q7Z410 1059 aa15.12■□□□□ 0.01
SEC13-206ENST00000397102 WRAP53Q9BUR4 548 aaKnown RBP15.12■□□□□ 0.01
SEC13-206ENST00000397102 APOOQ9BUR5 198 aa15.12■□□□□ 0.01
SEC13-206ENST00000397102 AKAP7Q9P0M2 348 aaPredicted RBP15.12■□□□□ 0.01
SEC13-206ENST00000397102 ATP6V1DQ9Y5K8 247 aa15.12■□□□□ 0.01
SEC13-206ENST00000397102 TNFP01375 233 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 ITIH2P19823 946 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 KRT9P35527 623 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 MAPKAPK2P49137 400 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 RAD51Q06609 339 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 ELP6Q0PNE2 266 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 ARHGEF7Q14155 803 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 C16orf72Q14CZ0 275 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 IGFBP7Q16270 282 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 WSCD2Q2TBF2 565 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 C14orf28Q4W4Y0 310 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 ATXN7L2Q5T6C5 722 aaPredicted RBP15.11■□□□□ 0.01
SEC13-206ENST00000397102 SMYD5Q6GMV2 418 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 ISM2Q6H9L7 571 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 NYAP1Q6ZVC0 841 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 BNIPLQ7Z465 357 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 NELFBQ8WX92 580 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 NKD1Q969G9 470 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 PDXPQ96GD0 296 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 WDR92Q96MX6 357 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 GDAP1L1Q96MZ0 367 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 SEMA6CQ9H3T2 930 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 RETREG1Q9H6L5 497 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 GDPD2Q9HCC8 539 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 NDFIP2Q9NV92 336 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 LRIT1Q9P2V4 623 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 DKK3Q9UBP4 350 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 APEX2Q9UBZ4 518 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 HPCAL4Q9UM19 191 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 MAN2B2Q9Y2E5 1009 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 COQ6Q9Y2Z9 468 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 DGKBQ9Y6T7 804 aa15.11■□□□□ 0.01
SEC13-206ENST00000397102 NUDT21O43809 227 aaKnown RBP15.1■□□□□ 0.01
SEC13-206ENST00000397102 TIMP2P16035 220 aa15.1■□□□□ 0.01
SEC13-206ENST00000397102 SUOXP51687 545 aa15.1■□□□□ 0.01
SEC13-206ENST00000397102 HLTFQ14527 1009 aaKnown RBP eCLIP15.1■□□□□ 0.01
SEC13-206ENST00000397102 INPP5AQ14642 412 aa15.1■□□□□ 0.01
SEC13-206ENST00000397102 MAP9Q49MG5 647 aa15.1■□□□□ 0.01
SEC13-206ENST00000397102 FAM102AQ5T9C2 384 aaPredicted RBP15.1■□□□□ 0.01
SEC13-206ENST00000397102 FAM131BQ86XD5 332 aa15.1■□□□□ 0.01
SEC13-206ENST00000397102 FAM26EQ8N5C1 309 aa15.1■□□□□ 0.01
SEC13-206ENST00000397102 FAM46DQ8NEK8 389 aa15.1■□□□□ 0.01
SEC13-206ENST00000397102 GPBAR1Q8TDU6 330 aa15.1■□□□□ 0.01
SEC13-206ENST00000397102 JPH3Q8WXH2 748 aaPredicted RBP15.1■□□□□ 0.01
SEC13-206ENST00000397102 CRACR2AQ9BSW2 395 aa15.1■□□□□ 0.01
SEC13-206ENST00000397102 CDH19Q9H159 772 aa15.1■□□□□ 0.01
SEC13-206ENST00000397102 MAGEH1Q9H213 219 aa15.1■□□□□ 0.01
SEC13-206ENST00000397102 HOOK1Q9UJC3 728 aaKnown RBP15.1■□□□□ 0.01
SEC13-206ENST00000397102 MAN1B1Q9UKM7 699 aa15.1■□□□□ 0.01
SEC13-206ENST00000397102 OR1A2Q9Y585 309 aa15.1■□□□□ 0.01
SEC13-206ENST00000397102 RELNP78509 3460 aa15.09■□□□□ 0.01
SEC13-206ENST00000397102 ARHGEF17Q96PE2 2063 aaPredicted RBP15.09■□□□□ 0.01
SEC13-206ENST00000397102 PPP1R3GB7ZBB8 358 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms