RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 DCAF4L2Q8NA75 395 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 NETO2Q8NC67 525 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 JOSD2Q8TAC2 188 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 BTBD6Q96KE9 485 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 C1orf74Q96LT6 269 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 C2orf49Q9BVC5 232 aaPredicted RBP10.5□□□□□ -0.73
NEDD8-202ENST00000396828 HDAC8Q9BY41 377 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 NRSN2Q9GZP1 204 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 IL36AQ9UHA7 158 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 GGT7Q9UJ14 662 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 STAP1Q9ULZ2 295 aa10.5□□□□□ -0.73
NEDD8-202ENST00000396828 FCF1Q9Y324 198 aaKnown RBP10.5□□□□□ -0.73
NEDD8-202ENST00000396828 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.5□□□□□ -0.73
NEDD8-202ENST00000396828 COL27A1Q8IZC6 1860 aaPredicted RBP10.5□□□□□ -0.73
NEDD8-202ENST00000396828 BOD1L1Q8NFC6 3051 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 CHD5Q8TDI0 1954 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 CCDC66A2RUB6 948 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 C2CD4BA6NLJ0 364 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 FAM72CH0Y354 149 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 SPINT1O43278 529 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 MAGEC1O60732 1142 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 PIAS2O75928 621 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 C1QL1O75973 258 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 ZIC2O95409 532 aaPredicted RBP10.49□□□□□ -0.73
NEDD8-202ENST00000396828 MT-CO3P00414 261 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 CDK4P11802 303 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 COMTP21964 271 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 HNRNPA2B1P22626 353 aaKnown RBP10.49□□□□□ -0.73
NEDD8-202ENST00000396828 NUDT1P36639 197 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 SSR1P43307 286 aaKnown RBP10.49□□□□□ -0.73
NEDD8-202ENST00000396828 ATP11AP98196 1134 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 FZD2Q14332 565 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 C15orf59Q2T9L4 293 aaPredicted RBP10.49□□□□□ -0.73
NEDD8-202ENST00000396828 FAM72AQ5TYM5 149 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 CDCP2Q5VXM1 449 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 FAM72DQ6L9T8 149 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 NEK5Q6P3R8 708 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 LEKR1Q6ZMV7 388 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 ABI3BPQ7Z7G0 1075 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 FAM72BQ86X60 149 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 OR6K2Q8NGY2 324 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 OR4C6Q8NH72 309 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 RXFP2Q8WXD0 754 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 SPOCK2Q92563 424 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 APOLD1Q96LR9 279 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 CNPY3Q9BT09 278 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 SLC17A9Q9BYT1 436 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 TRIM7Q9C029 511 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 GOLPH3Q9H4A6 298 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 ATP13A1Q9HD20 1204 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 GPR27Q9NS67 375 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 RRN3Q9NYV6 651 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 PNMA8BQ9ULN7 279 aaPredicted RBP10.49□□□□□ -0.73
NEDD8-202ENST00000396828 ITM2BQ9Y287 266 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 FADS3Q9Y5Q0 445 aa10.49□□□□□ -0.73
NEDD8-202ENST00000396828 ILVBLA1L0T0 632 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 OPA1O60313 960 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 PRNPP04156 253 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 ATP1A1P05023 1023 aaKnown RBP10.48□□□□□ -0.73
NEDD8-202ENST00000396828 CKMT1AP12532 417 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 ADRB3P13945 408 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 TCP1P17987 556 aaKnown RBP10.48□□□□□ -0.73
NEDD8-202ENST00000396828 ITIH2P19823 946 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 AKT2P31751 481 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 L1CAMP32004 1257 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 ABL2P42684 1182 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 PTPN9P43378 593 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 SERPINH1P50454 418 aaKnown RBP10.48□□□□□ -0.73
NEDD8-202ENST00000396828 DNA2P51530 1060 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 CLCN6P51797 869 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 CCNHP51946 323 aaPredicted RBP10.48□□□□□ -0.73
NEDD8-202ENST00000396828 DAB2P98082 770 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 OGDHQ02218 1023 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 GNA12Q03113 381 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 MTA1Q13330 715 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 TUBB2AQ13885 445 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 HADHQ16836 314 aaKnown RBP10.48□□□□□ -0.73
NEDD8-202ENST00000396828 CDO1Q16878 200 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 CCDC14Q49A88 953 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 CARD16Q5EG05 197 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 MANEALQ5VSG8 457 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 PCSK4Q6UW60 755 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 LRRC31Q6UY01 552 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 PARS2Q7L3T8 475 aaKnown RBP10.48□□□□□ -0.73
NEDD8-202ENST00000396828 PTAR1Q7Z6K3 402 aaPredicted RBP10.48□□□□□ -0.73
NEDD8-202ENST00000396828 RHOT1Q8IXI2 618 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 SNIP1Q8TAD8 396 aaKnown RBP10.48□□□□□ -0.73
NEDD8-202ENST00000396828 HAPLN3Q96S86 360 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 KLF6Q99612 283 aaPredicted RBP10.48□□□□□ -0.73
NEDD8-202ENST00000396828 TUBB2BQ9BVA1 445 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 TM6SF2Q9BZW4 377 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 ZYG11BQ9C0D3 744 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 OSBPL2Q9H1P3 480 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 TCEAL2Q9H3H9 227 aaPredicted RBP10.48□□□□□ -0.73
NEDD8-202ENST00000396828 DYRK4Q9NR20 520 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 TMEM51Q9NW97 253 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 DNAJC28Q9NX36 388 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 SNX12Q9UMY4 172 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 NEU3Q9UQ49 428 aa10.48□□□□□ -0.73
NEDD8-202ENST00000396828 FARP1Q9Y4F1 1045 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms