RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 NSUN2Q08J23 767 aaKnown RBP eCLIP11.65□□□□□ -0.55
PDXDC1-202ENST00000396410 ZNF177Q13360 481 aaPredicted RBP11.65□□□□□ -0.55
PDXDC1-202ENST00000396410 FLOT2Q14254 428 aa11.65□□□□□ -0.55
PDXDC1-202ENST00000396410 MAPRE2Q15555 327 aa11.65□□□□□ -0.55
PDXDC1-202ENST00000396410 PARP15Q460N3 678 aa11.65□□□□□ -0.55
PDXDC1-202ENST00000396410 TMCO4Q5TGY1 634 aa11.65□□□□□ -0.55
PDXDC1-202ENST00000396410 HECTD2Q5U5R9 776 aa11.65□□□□□ -0.55
PDXDC1-202ENST00000396410 HPS6Q86YV9 775 aa11.65□□□□□ -0.55
PDXDC1-202ENST00000396410 CEP97Q8IW35 865 aa11.65□□□□□ -0.55
PDXDC1-202ENST00000396410 DDIASQ8IXT1 998 aa11.65□□□□□ -0.55
PDXDC1-202ENST00000396410 EFHBQ8N7U6 833 aa11.65□□□□□ -0.55
PDXDC1-202ENST00000396410 CEP70Q8NHQ1 597 aa11.65□□□□□ -0.55
PDXDC1-202ENST00000396410 HMX1Q9NP08 348 aaPredicted RBP11.65□□□□□ -0.55
PDXDC1-202ENST00000396410 TMEM161AQ9NX61 479 aa11.65□□□□□ -0.55
PDXDC1-202ENST00000396410 SQORQ9Y6N5 450 aa11.65□□□□□ -0.55
PDXDC1-202ENST00000396410 MOXD2PA6NHM9 499 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 DLX3O60479 287 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 RHOBTB1O94844 696 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 MT-CO1P00395 513 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 HAPLN1P10915 354 aaPredicted RBP11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 PBX3P40426 434 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 SPATA24Q86W54 205 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 GBP5Q96PP8 586 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 CDRT15Q96T59 188 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 RTKNQ9BST9 563 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 OSER1Q9NX31 292 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 DLGAP2Q9P1A6 1054 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 FNIP2Q9P278 1114 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 PLA2G4CQ9UP65 541 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 CBX4O00257 560 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 HOXA2O43364 376 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 RBM20Q5T481 1227 aaKnown RBP11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 COLGALT2Q8IYK4 626 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 TTC9BQ8N6N2 239 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 C2CD4AQ8NCU7 369 aaPredicted RBP11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 DBF4BQ8NFT6 615 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 RNF186Q9NXI6 227 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 ZDHHC2Q9UIJ5 367 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 NEMP2A6NFY4 417 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 TNFRSF10BO14763 440 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 RHOCP08134 193 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 UBTFL6P0CB48 400 aaPredicted RBP11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 SELPP16109 830 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 PEX19P40855 299 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 IL10RBQ08334 325 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 FUT10Q6P4F1 479 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 RNF148Q8N7C7 305 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 RP9Q8TA86 221 aaKnown RBP11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 CD99L2Q8TCZ2 262 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 STYXQ8WUJ0 223 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 MRM3Q9HC36 420 aaKnown RBP11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 SARS2Q9NP81 518 aaKnown RBP11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 SCUBE2Q9NQ36 999 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 TMEM248Q9NWD8 314 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 LRRC42Q9Y546 428 aa11.64□□□□□ -0.55
PDXDC1-202ENST00000396410 SHROOM3Q8TF72 1996 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 CRTAMO95727 393 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 TACR2P21452 398 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 TLDC1Q6P9B6 456 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 FRMD7Q6ZUT3 714 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 ANKS3Q6ZW76 656 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 UMODL1-AS1Q8N2C9 162 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 FBXW8Q8N3Y1 598 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 TBATAQ96M53 351 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 CCSER2Q9H7U1 834 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 DNMT3LQ9UJW3 386 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 TLL2Q9Y6L7 1015 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 SUPT3HB4E1H0 165 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 TSPAN3O60637 253 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 SUPT3HO75486 399 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 RANBP10Q6VN20 620 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 ZNF598Q86UK7 904 aaKnown RBP11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 DENND1CQ8IV53 801 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 KLHDC9Q8NEP7 349 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 OR52K2Q8NGK3 314 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 IGSF8Q969P0 613 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 RCN3Q96D15 328 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 CNDP1Q96KN2 507 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 EXOC2Q96KP1 924 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 CDK5RAP1Q96SZ6 601 aaKnown RBP11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 ATP13A1Q9HD20 1204 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 CLIC5Q9NZA1 410 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 UBA2Q9UBT2 640 aaPredicted RBP11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 OR51F1A6NGY5 319 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 UBDO15205 165 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 SRP72O76094 671 aaKnown RBP11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 IGLV3-25P01717 112 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 RAG1P15918 1043 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 TSPAN8P19075 237 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 HSF5Q4G112 596 aaPredicted RBP11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 SIRPB2Q5JXA9 342 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 FAM45BPQ6NSW5 357 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 TAS2R42Q7RTR8 314 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 FAM45AQ8TCE6 357 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 IMP4Q96G21 291 aaKnown RBP11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 ZNF333Q96JL9 665 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 MRPL9Q9BYD2 267 aaKnown RBP11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 SUDS3Q9H7L9 328 aaPredicted RBP11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 TRPC7Q9HCX4 862 aa11.63□□□□□ -0.55
PDXDC1-202ENST00000396410 CATSPERZQ9NTU4 200 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms