RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 PHTF2Q8N3S3 785 aa16.92■□□□□ 0.3
NUP50-202ENST00000396096 POU5F2Q8N7G0 328 aa16.92■□□□□ 0.3
NUP50-202ENST00000396096 HEXDCQ8WVB3 486 aa16.92■□□□□ 0.3
NUP50-202ENST00000396096 N4BP2L2Q92802 583 aaPredicted RBP16.92■□□□□ 0.3
NUP50-202ENST00000396096 NAF1Q96HR8 494 aaKnown RBP16.92■□□□□ 0.3
NUP50-202ENST00000396096 FEM1CQ96JP0 617 aa16.92■□□□□ 0.3
NUP50-202ENST00000396096 OR52B2Q96RD2 323 aa16.92■□□□□ 0.3
NUP50-202ENST00000396096 CCDC28BQ9BUN5 200 aa16.92■□□□□ 0.3
NUP50-202ENST00000396096 CCSER2Q9H7U1 834 aa16.92■□□□□ 0.3
NUP50-202ENST00000396096 PDFQ9HBH1 243 aa16.92■□□□□ 0.3
NUP50-202ENST00000396096 UXTQ9UBK9 157 aaPredicted RBP16.92■□□□□ 0.3
NUP50-202ENST00000396096 LRFN2Q9ULH4 789 aa16.92■□□□□ 0.3
NUP50-202ENST00000396096 AURKAO14965 403 aa16.91■□□□□ 0.3
NUP50-202ENST00000396096 TLR5O60602 858 aa16.91■□□□□ 0.3
NUP50-202ENST00000396096 TBX10O75333 385 aa16.91■□□□□ 0.3
NUP50-202ENST00000396096 WISP3O95389 354 aaPredicted RBP16.91■□□□□ 0.3
NUP50-202ENST00000396096 GALTP07902 379 aa16.91■□□□□ 0.3
NUP50-202ENST00000396096 HMBSP08397 361 aa16.91■□□□□ 0.3
NUP50-202ENST00000396096 COX4I1P13073 169 aa16.91■□□□□ 0.3
NUP50-202ENST00000396096 ATP5F1P24539 256 aaPredicted RBP16.91■□□□□ 0.3
NUP50-202ENST00000396096 OR1E1P30953 314 aa16.91■□□□□ 0.3
NUP50-202ENST00000396096 SLC25A3Q00325 362 aa16.91■□□□□ 0.3
NUP50-202ENST00000396096 NSUN2Q08J23 767 aaKnown RBP eCLIP16.91■□□□□ 0.3
NUP50-202ENST00000396096 DUSP4Q13115 394 aa16.91■□□□□ 0.3
NUP50-202ENST00000396096 TECRLQ5HYJ1 363 aa16.91■□□□□ 0.3
NUP50-202ENST00000396096 RBM20Q5T481 1227 aaKnown RBP16.91■□□□□ 0.3
NUP50-202ENST00000396096 PGM2L1Q6PCE3 622 aa16.91■□□□□ 0.3
NUP50-202ENST00000396096 FAM126BQ8IXS8 530 aa16.91■□□□□ 0.3
NUP50-202ENST00000396096 CPSF7Q8N684 471 aaKnown RBP16.91■□□□□ 0.3
NUP50-202ENST00000396096 ACTRT2Q8TDY3 377 aa16.91■□□□□ 0.3
NUP50-202ENST00000396096 MYEOVQ96EZ4 313 aa16.91■□□□□ 0.3
NUP50-202ENST00000396096 CLPTM1LQ96KA5 538 aa16.91■□□□□ 0.3
NUP50-202ENST00000396096 TTPALQ9BTX7 342 aa16.91■□□□□ 0.3
NUP50-202ENST00000396096 POLR1EQ9GZS1 481 aaKnown RBP16.91■□□□□ 0.3
NUP50-202ENST00000396096 E9PBE3 544 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 PITPNM1O00562 1244 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 DCXO43602 365 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 LDB2O43679 373 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 KLHL41O60662 606 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 FGF1P05230 155 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 ATF6P18850 670 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 HLA-DPA1P20036 260 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 ADSLP30566 484 aaPredicted RBP16.9■□□□□ 0.3
NUP50-202ENST00000396096 ACVRL1P37023 503 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 SLC26A3P40879 764 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 PFKPQ01813 784 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 FAM83EQ2M2I3 478 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 ZNF789Q5FWF6 425 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 PIWIL4Q7Z3Z4 852 aaKnown RBP16.9■□□□□ 0.3
NUP50-202ENST00000396096 CIR1Q86X95 450 aaPredicted RBP16.9■□□□□ 0.3
NUP50-202ENST00000396096 ZNF354CQ86Y25 554 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 TXNDC5Q8NBS9 432 aaKnown RBP16.9■□□□□ 0.3
NUP50-202ENST00000396096 SLAIN1Q8ND83 568 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 OLFM1Q99784 485 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 RTKNQ9BST9 563 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 ZNF385DQ9H6B1 395 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 MAN1C1Q9NR34 630 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 BATF3Q9NR55 127 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 ZDHHC2Q9UIJ5 367 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 RIMKLBQ9ULI2 386 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 F5H5T6 163 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 EFEMP2O95967 443 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 LTA4HP09960 611 aaKnown RBP16.9■□□□□ 0.3
NUP50-202ENST00000396096 ACADSP16219 412 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 ATP6V1C1P21283 382 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 CCR10P46092 362 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 AGAP9Q5VTM2 703 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 NRG4Q8WWG1 115 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 OVCA2Q8WZ82 227 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 CCDC126Q96EE4 140 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 ZNF333Q96JL9 665 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 CAPNS2Q96L46 248 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 UBXN10Q96LJ8 280 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 SEMA3CQ99985 751 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 MAGEH1Q9H213 219 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 NCKIPSDQ9NZQ3 722 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 HCSTQ9UBK5 93 aa16.9■□□□□ 0.3
NUP50-202ENST00000396096 NVLO15381 856 aaKnown RBP16.89■□□□□ 0.29
NUP50-202ENST00000396096 ACSL4O60488 711 aa16.89■□□□□ 0.29
NUP50-202ENST00000396096 LUC7L3O95232 432 aaKnown RBP16.89■□□□□ 0.29
NUP50-202ENST00000396096 S1PR4O95977 384 aa16.89■□□□□ 0.29
NUP50-202ENST00000396096 RBP1P09455 135 aa16.89■□□□□ 0.29
NUP50-202ENST00000396096 ITGAXP20702 1163 aa16.89■□□□□ 0.29
NUP50-202ENST00000396096 TCTN1Q2MV58 587 aa16.89■□□□□ 0.29
NUP50-202ENST00000396096 LSM12Q3MHD2 195 aaKnown RBP16.89■□□□□ 0.29
NUP50-202ENST00000396096 HECTD2Q5U5R9 776 aa16.89■□□□□ 0.29
NUP50-202ENST00000396096 C1orf146Q5VVC0 180 aa16.89■□□□□ 0.29
NUP50-202ENST00000396096 LRRC74BQ6ZQY2 392 aa16.89■□□□□ 0.29
NUP50-202ENST00000396096 ACAD11Q709F0 780 aa16.89■□□□□ 0.29
NUP50-202ENST00000396096 TAS1R1Q7RTX1 841 aa16.89■□□□□ 0.29
NUP50-202ENST00000396096 KDM1BQ8NB78 822 aa16.89■□□□□ 0.29
NUP50-202ENST00000396096 GPR150Q8NGU9 434 aa16.89■□□□□ 0.29
NUP50-202ENST00000396096 SCG3Q8WXD2 468 aaKnown RBP16.89■□□□□ 0.29
NUP50-202ENST00000396096 DNAJC9Q8WXX5 260 aa16.89■□□□□ 0.29
NUP50-202ENST00000396096 MOCOSQ96EN8 888 aa16.89■□□□□ 0.29
NUP50-202ENST00000396096 DNMT3LQ9UJW3 386 aa16.89■□□□□ 0.29
NUP50-202ENST00000396096 ANGPTL2Q9UKU9 493 aa16.89■□□□□ 0.29
NUP50-202ENST00000396096 ARHGAP26Q9UNA1 814 aa16.89■□□□□ 0.29
NUP50-202ENST00000396096 MUSKO15146 869 aa16.88■□□□□ 0.29
NUP50-202ENST00000396096 FKBP6O75344 327 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms