RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 TFDP2Q14188 446 aa10.21□□□□□ -0.77
THUMPD1-202ENST00000396083 PCSK7Q16549 785 aa10.21□□□□□ -0.77
THUMPD1-202ENST00000396083 HSP90B2PQ58FF3 399 aa10.21□□□□□ -0.77
THUMPD1-202ENST00000396083 FAM46CQ5VWP2 391 aa10.21□□□□□ -0.77
THUMPD1-202ENST00000396083 CCDC13Q8IYE1 715 aa10.21□□□□□ -0.77
THUMPD1-202ENST00000396083 KIAA2013Q8IYS2 634 aa10.21□□□□□ -0.77
THUMPD1-202ENST00000396083 SLC35F6Q8N357 371 aa10.21□□□□□ -0.77
THUMPD1-202ENST00000396083 ZCCHC9Q8N567 271 aaKnown RBP10.21□□□□□ -0.77
THUMPD1-202ENST00000396083 OR2I1PQ8NGU4 316 aa10.21□□□□□ -0.77
THUMPD1-202ENST00000396083 VOPP1Q96AW1 172 aa10.21□□□□□ -0.77
THUMPD1-202ENST00000396083 CEP44Q9C0F1 390 aa10.21□□□□□ -0.77
THUMPD1-202ENST00000396083 CDC23Q9UJX2 597 aa10.21□□□□□ -0.77
THUMPD1-202ENST00000396083 PCDHB9Q9Y5E1 797 aa10.21□□□□□ -0.77
THUMPD1-202ENST00000396083 ADH1BP00325 375 aa10.21□□□□□ -0.78
THUMPD1-202ENST00000396083 MX2P20592 715 aa10.21□□□□□ -0.78
THUMPD1-202ENST00000396083 RBL1P28749 1068 aa10.21□□□□□ -0.78
THUMPD1-202ENST00000396083 TAS2R38P59533 333 aa10.21□□□□□ -0.78
THUMPD1-202ENST00000396083 IHHQ14623 411 aa10.21□□□□□ -0.78
THUMPD1-202ENST00000396083 MEI1Q5TIA1 1274 aa10.21□□□□□ -0.78
THUMPD1-202ENST00000396083 LYSMD4Q5XG99 296 aa10.21□□□□□ -0.78
THUMPD1-202ENST00000396083 SEL1L3Q68CR1 1132 aa10.21□□□□□ -0.78
THUMPD1-202ENST00000396083 GDPD4Q6W3E5 623 aa10.21□□□□□ -0.78
THUMPD1-202ENST00000396083 ERN2Q76MJ5 926 aaKnown RBP10.21□□□□□ -0.78
THUMPD1-202ENST00000396083 CNTD1Q8N815 330 aa10.21□□□□□ -0.78
THUMPD1-202ENST00000396083 TRIM58Q8NG06 486 aa10.21□□□□□ -0.78
THUMPD1-202ENST00000396083 SPATA22Q8NHS9 363 aa10.21□□□□□ -0.78
THUMPD1-202ENST00000396083 PSKH2Q96QS6 385 aa10.21□□□□□ -0.78
THUMPD1-202ENST00000396083 TLR10Q9BXR5 811 aa10.21□□□□□ -0.78
THUMPD1-202ENST00000396083 IRF2BPLQ9H1B7 796 aa10.21□□□□□ -0.78
THUMPD1-202ENST00000396083 SEMA4AQ9H3S1 761 aa10.21□□□□□ -0.78
THUMPD1-202ENST00000396083 RETREG1Q9H6L5 497 aa10.21□□□□□ -0.78
THUMPD1-202ENST00000396083 EBF2Q9HAK2 575 aa10.21□□□□□ -0.78
THUMPD1-202ENST00000396083 SCUBE2Q9NQ36 999 aa10.21□□□□□ -0.78
THUMPD1-202ENST00000396083 MIF4GDA9UHW6 222 aaKnown RBP10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 MATN3O15232 486 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 GDF9O60383 454 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 MT-CYBP00156 380 aaPredicted RBP10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 SLC4A1P02730 911 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 PDHA1P08559 390 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 RBP3P10745 1247 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 ADRB3P13945 408 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 XPAP23025 273 aaPredicted RBP10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 MPLP40238 635 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 ABL2P42684 1182 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 RENBPP51606 427 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 BCL2L1Q07817 233 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 PDK1Q15118 436 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 PIP5KL1Q5T9C9 394 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 CYP2U1Q7Z449 544 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 PRUNE1Q86TP1 453 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 C1orf54Q8WWF1 131 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 ISG20Q96AZ6 181 aaKnown RBP10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 HDAC11Q96DB2 347 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 MS4A14Q96JA4 679 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 RBM15Q96T37 977 aaKnown RBP eCLIP10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 KCNH6Q9H252 994 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 GMEB2Q9UKD1 530 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 COQ6Q9Y2Z9 468 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 H0Y8X5 98 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 WNT9AO14904 365 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 PPP1R12AO14974 1030 aaPredicted RBP10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 CEP104O60308 925 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 PAK4O96013 591 aaPredicted RBP10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 ATP1A1P05023 1023 aaKnown RBP10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 CTPS1P17812 591 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 CNR2P34972 360 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 CETN2P41208 172 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 CD86P42081 329 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 CSNK1EP49674 416 aaKnown RBP10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 TUBB4BP68371 445 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 PPIDQ08752 370 aaKnown RBP10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 ZNF805Q5CZA5 627 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 SEL1L2Q5TEA6 688 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 BBS12Q6ZW61 710 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 BBS5Q8N3I7 341 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 TFB1MQ8WVM0 346 aaKnown RBP10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 OLFM3Q96PB7 478 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 SUV39H2Q9H5I1 410 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 CHKBQ9Y259 395 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 APOC4-APOC2K7ER74 178 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 KIF5CO60282 957 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 TJP3O95049 919 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 GSRP00390 522 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 APOC2P02655 101 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 PIRTP0C851 137 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 ZFXP17010 805 aaPredicted RBP10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 CCNCP24863 283 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 NEK3P51956 506 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 EIF3EP60228 445 aaKnown RBP10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 IRX4P78413 519 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 ZBTB16Q05516 673 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 NIPAL4Q0D2K0 466 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 HNRNPDQ14103 355 aaKnown RBP10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 CASP8Q14790 479 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 TCEA2Q15560 299 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 TRIM61Q5EBN2 209 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 TIGD7Q6NT04 549 aaPredicted RBP10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 DARS2Q6PI48 645 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms