RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 HNRNPKP61978 463 aaKnown RBP eCLIP16.33■□□□□ 0.2
CXCL12-206ENST00000395795 RALGDSQ12967 914 aa16.33■□□□□ 0.2
CXCL12-206ENST00000395795 RTP5Q14D33 572 aa16.33■□□□□ 0.2
CXCL12-206ENST00000395795 DPYSL2Q16555 572 aa16.33■□□□□ 0.2
CXCL12-206ENST00000395795 UGP2Q16851 508 aa16.33■□□□□ 0.2
CXCL12-206ENST00000395795 WSCD2Q2TBF2 565 aa16.33■□□□□ 0.2
CXCL12-206ENST00000395795 C19orf48Q6RUI8 117 aa16.33■□□□□ 0.2
CXCL12-206ENST00000395795 VPS36Q86VN1 386 aa16.33■□□□□ 0.2
CXCL12-206ENST00000395795 ARHGEF26Q96DR7 871 aa16.33■□□□□ 0.2
CXCL12-206ENST00000395795 WRAP53Q9BUR4 548 aaKnown RBP16.33■□□□□ 0.2
CXCL12-206ENST00000395795 PCDH12Q9NPG4 1184 aa16.33■□□□□ 0.2
CXCL12-206ENST00000395795 MYO1AQ9UBC5 1043 aa16.33■□□□□ 0.2
CXCL12-206ENST00000395795 LHX6Q9UPM6 363 aa16.33■□□□□ 0.2
CXCL12-206ENST00000395795 COQ6Q9Y2Z9 468 aa16.33■□□□□ 0.2
CXCL12-206ENST00000395795 CSNK1G3Q9Y6M4 447 aa16.33■□□□□ 0.2
CXCL12-206ENST00000395795 A0A087X0T9 212 aa16.32■□□□□ 0.2
CXCL12-206ENST00000395795 ARHGAP42A6NI28 874 aa16.32■□□□□ 0.2
CXCL12-206ENST00000395795 NEMP1O14524 444 aa16.32■□□□□ 0.2
CXCL12-206ENST00000395795 TLX3O43711 291 aaPredicted RBP16.32■□□□□ 0.2
CXCL12-206ENST00000395795 PRPSAP2O60256 369 aa16.32■□□□□ 0.2
CXCL12-206ENST00000395795 TM7SF2O76062 418 aa16.32■□□□□ 0.2
CXCL12-206ENST00000395795 SERPINC1P01008 464 aa16.32■□□□□ 0.2
CXCL12-206ENST00000395795 FAM228BP0C875 321 aa16.32■□□□□ 0.2
CXCL12-206ENST00000395795 MYBL1P10243 752 aa16.32■□□□□ 0.2
CXCL12-206ENST00000395795 SEMG2Q02383 582 aa16.32■□□□□ 0.2
CXCL12-206ENST00000395795 SLC25A11Q02978 314 aaKnown RBP16.32■□□□□ 0.2
CXCL12-206ENST00000395795 RAD51Q06609 339 aa16.32■□□□□ 0.2
CXCL12-206ENST00000395795 AGERQ15109 404 aa16.32■□□□□ 0.2
CXCL12-206ENST00000395795 IRF4Q15306 451 aa16.32■□□□□ 0.2
CXCL12-206ENST00000395795 PPP6R3Q5H9R7 873 aaPredicted RBP16.32■□□□□ 0.2
CXCL12-206ENST00000395795 POLNQ7Z5Q5 900 aa16.32■□□□□ 0.2
CXCL12-206ENST00000395795 SRLQ86TD4 932 aa16.32■□□□□ 0.2
CXCL12-206ENST00000395795 CPNE8Q86YQ8 564 aa16.32■□□□□ 0.2
CXCL12-206ENST00000395795 PGBD5Q8N414 524 aa16.32■□□□□ 0.2
CXCL12-206ENST00000395795 NIPA2Q8N8Q9 360 aa16.32■□□□□ 0.2
CXCL12-206ENST00000395795 BTBD6Q96KE9 485 aa16.32■□□□□ 0.2
CXCL12-206ENST00000395795 ZNF641Q96N77 438 aaPredicted RBP16.32■□□□□ 0.2
CXCL12-206ENST00000395795 TUBGCP5Q96RT8 1024 aa16.32■□□□□ 0.2
CXCL12-206ENST00000395795 CLPBQ9H078 707 aa16.32■□□□□ 0.2
CXCL12-206ENST00000395795 THAP2Q9H0W7 228 aa16.32■□□□□ 0.2
CXCL12-206ENST00000395795 CAPN11Q9UMQ6 739 aa16.32■□□□□ 0.2
CXCL12-206ENST00000395795 SCINQ9Y6U3 715 aa16.32■□□□□ 0.2
CXCL12-206ENST00000395795 A0A087WV48 116 aa16.31■□□□□ 0.2
CXCL12-206ENST00000395795 LZTS3O60299 673 aaPredicted RBP16.31■□□□□ 0.2
CXCL12-206ENST00000395795 OPA1O60313 960 aa16.31■□□□□ 0.2
CXCL12-206ENST00000395795 RNF8O76064 485 aa16.31■□□□□ 0.2
CXCL12-206ENST00000395795 GYPCP04921 128 aa16.31■□□□□ 0.2
CXCL12-206ENST00000395795 CYP1A2P05177 515 aa16.31■□□□□ 0.2
CXCL12-206ENST00000395795 CELA2BP08218 269 aaPredicted RBP16.31■□□□□ 0.2
CXCL12-206ENST00000395795 RARAP10276 462 aa16.31■□□□□ 0.2
CXCL12-206ENST00000395795 C6P13671 934 aa16.31■□□□□ 0.2
CXCL12-206ENST00000395795 JUNDP17535 347 aa16.31■□□□□ 0.2
CXCL12-206ENST00000395795 CR2P20023 1033 aa16.31■□□□□ 0.2
CXCL12-206ENST00000395795 AMPD1P23109 780 aa16.31■□□□□ 0.2
CXCL12-206ENST00000395795 IL4RP24394 825 aa16.31■□□□□ 0.2
CXCL12-206ENST00000395795 SUOXP51687 545 aa16.31■□□□□ 0.2
CXCL12-206ENST00000395795 IL10RBQ08334 325 aa16.31■□□□□ 0.2
CXCL12-206ENST00000395795 SLC10A7Q0GE19 358 aa16.31■□□□□ 0.2
CXCL12-206ENST00000395795 SMTNL2Q2TAL5 461 aa16.31■□□□□ 0.2
CXCL12-206ENST00000395795 COL28A1Q2UY09 1125 aa16.31■□□□□ 0.2
CXCL12-206ENST00000395795 FAM71BQ8TC56 605 aa16.31■□□□□ 0.2
CXCL12-206ENST00000395795 SPOCK2Q92563 424 aa16.31■□□□□ 0.2
CXCL12-206ENST00000395795 PSKH2Q96QS6 385 aa16.31■□□□□ 0.2
CXCL12-206ENST00000395795 LRRC61Q9BV99 259 aa16.31■□□□□ 0.2
CXCL12-206ENST00000395795 NRSN2Q9GZP1 204 aa16.31■□□□□ 0.2
CXCL12-206ENST00000395795 SCUBE2Q9NQ36 999 aa16.31■□□□□ 0.2
CXCL12-206ENST00000395795 IPO11Q9UI26 975 aaKnown RBP16.31■□□□□ 0.2
CXCL12-206ENST00000395795 LRP4O75096 1905 aa16.31■□□□□ 0.2
CXCL12-206ENST00000395795 A0A1W2PNU3 283 aaPredicted RBP16.3■□□□□ 0.2
CXCL12-206ENST00000395795 TTC24A2A3L6 582 aaPredicted RBP16.3■□□□□ 0.2
CXCL12-206ENST00000395795 AQP9O43315 295 aa16.3■□□□□ 0.2
CXCL12-206ENST00000395795 PALMO75781 387 aa16.3■□□□□ 0.2
CXCL12-206ENST00000395795 MT-CO3P00414 261 aa16.3■□□□□ 0.2
CXCL12-206ENST00000395795 HNF1BP35680 557 aa16.3■□□□□ 0.2
CXCL12-206ENST00000395795 EIF4A3P38919 411 aaKnown RBP16.3■□□□□ 0.2
CXCL12-206ENST00000395795 ARSEP51690 589 aa16.3■□□□□ 0.2
CXCL12-206ENST00000395795 ZNF135P52742 658 aaPredicted RBP16.3■□□□□ 0.2
CXCL12-206ENST00000395795 UBASH3AP57075 661 aa16.3■□□□□ 0.2
CXCL12-206ENST00000395795 YPEL5P62699 121 aa16.3■□□□□ 0.2
CXCL12-206ENST00000395795 ZBED6P86452 979 aa16.3■□□□□ 0.2
CXCL12-206ENST00000395795 E2F1Q01094 437 aa16.3■□□□□ 0.2
CXCL12-206ENST00000395795 NSUN2Q08J23 767 aaKnown RBP eCLIP16.3■□□□□ 0.2
CXCL12-206ENST00000395795 ACAP1Q15027 740 aa16.3■□□□□ 0.2
CXCL12-206ENST00000395795 DEFB133Q30KQ1 61 aa16.3■□□□□ 0.2
CXCL12-206ENST00000395795 BRAT1Q6PJG6 821 aa16.3■□□□□ 0.2
CXCL12-206ENST00000395795 MACC1Q6ZN28 852 aa16.3■□□□□ 0.2
CXCL12-206ENST00000395795 PHACTR4Q8IZ21 702 aa16.3■□□□□ 0.2
CXCL12-206ENST00000395795 PELI3Q8N2H9 469 aa16.3■□□□□ 0.2
CXCL12-206ENST00000395795 CXorf40AQ8TE69 158 aa16.3■□□□□ 0.2
CXCL12-206ENST00000395795 TRIM11Q96F44 468 aa16.3■□□□□ 0.2
CXCL12-206ENST00000395795 CRELD1Q96HD1 420 aa16.3■□□□□ 0.2
CXCL12-206ENST00000395795 TBATAQ96M53 351 aa16.3■□□□□ 0.2
CXCL12-206ENST00000395795 CSPG4P5Q96PW8 444 aa16.3■□□□□ 0.2
CXCL12-206ENST00000395795 BOCQ9BWV1 1114 aa16.3■□□□□ 0.2
CXCL12-206ENST00000395795 CLCA2Q9UQC9 943 aa16.3■□□□□ 0.2
CXCL12-206ENST00000395795 ATP8A1Q9Y2Q0 1164 aa16.3■□□□□ 0.2
CXCL12-206ENST00000395795 PCDHB1Q9Y5F3 818 aa16.3■□□□□ 0.2
CXCL12-206ENST00000395795 DFFAO00273 331 aa16.29■□□□□ 0.2
CXCL12-206ENST00000395795 TPP1O14773 563 aa16.29■□□□□ 0.2
CXCL12-206ENST00000395795 MAFKO60675 156 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms