RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 NPWQ8N729 165 aa13.88□□□□□ -0.19
CXCL12-205ENST00000395794 TSEN2Q8NCE0 465 aaKnown RBP13.88□□□□□ -0.19
CXCL12-205ENST00000395794 OR8K1Q8NGG5 319 aa13.88□□□□□ -0.19
CXCL12-205ENST00000395794 OR4C6Q8NH72 309 aa13.88□□□□□ -0.19
CXCL12-205ENST00000395794 BTN2A2Q8WVV5 523 aa13.88□□□□□ -0.19
CXCL12-205ENST00000395794 CTNNBL1Q8WYA6 563 aaPredicted RBP13.88□□□□□ -0.19
CXCL12-205ENST00000395794 ZNF599Q96NL3 588 aa13.88□□□□□ -0.19
CXCL12-205ENST00000395794 KLF6Q99612 283 aaPredicted RBP13.88□□□□□ -0.19
CXCL12-205ENST00000395794 DUSP23Q9BVJ7 150 aa13.88□□□□□ -0.19
CXCL12-205ENST00000395794 LCMT1Q9UIC8 334 aa13.88□□□□□ -0.19
CXCL12-205ENST00000395794 TRIM38O00635 465 aa13.87□□□□□ -0.19
CXCL12-205ENST00000395794 TOR1BO14657 336 aa13.87□□□□□ -0.19
CXCL12-205ENST00000395794 SIGLEC6O43699 453 aa13.87□□□□□ -0.19
CXCL12-205ENST00000395794 LZTS3O60299 673 aaPredicted RBP13.87□□□□□ -0.19
CXCL12-205ENST00000395794 CSF2P04141 144 aa13.87□□□□□ -0.19
CXCL12-205ENST00000395794 AMPD1P23109 780 aa13.87□□□□□ -0.19
CXCL12-205ENST00000395794 HNRNPH3P31942 346 aaKnown RBP13.87□□□□□ -0.19
CXCL12-205ENST00000395794 EIF4A3P38919 411 aaKnown RBP13.87□□□□□ -0.19
CXCL12-205ENST00000395794 SCNN1BP51168 640 aa13.87□□□□□ -0.19
CXCL12-205ENST00000395794 FZD2Q14332 565 aa13.87□□□□□ -0.19
CXCL12-205ENST00000395794 ZNF235Q14590 738 aa13.87□□□□□ -0.19
CXCL12-205ENST00000395794 LBRQ14739 615 aaKnown RBP13.87□□□□□ -0.19
CXCL12-205ENST00000395794 TMEM52BQ4KMG9 183 aa13.87□□□□□ -0.19
CXCL12-205ENST00000395794 POLNQ7Z5Q5 900 aa13.87□□□□□ -0.19
CXCL12-205ENST00000395794 ATPAF2Q8N5M1 289 aa13.87□□□□□ -0.19
CXCL12-205ENST00000395794 ZNF564Q8TBZ8 553 aaPredicted RBP13.87□□□□□ -0.19
CXCL12-205ENST00000395794 TSC1Q92574 1164 aa13.87□□□□□ -0.19
CXCL12-205ENST00000395794 CENPTQ96BT3 561 aa13.87□□□□□ -0.19
CXCL12-205ENST00000395794 BTBD6Q96KE9 485 aa13.87□□□□□ -0.19
CXCL12-205ENST00000395794 CSPG4P5Q96PW8 444 aa13.87□□□□□ -0.19
CXCL12-205ENST00000395794 PCDH12Q9NPG4 1184 aa13.87□□□□□ -0.19
CXCL12-205ENST00000395794 UCKL1Q9NWZ5 548 aa13.87□□□□□ -0.19
CXCL12-205ENST00000395794 NLGN3Q9NZ94 848 aa13.87□□□□□ -0.19
CXCL12-205ENST00000395794 CTTNBP2NLQ9P2B4 639 aa13.87□□□□□ -0.19
CXCL12-205ENST00000395794 UVRAGQ9P2Y5 699 aa13.87□□□□□ -0.19
CXCL12-205ENST00000395794 FRYQ5TBA9 3013 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 COL5A1P20908 1838 aaPredicted RBP13.86□□□□□ -0.19
CXCL12-205ENST00000395794 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.86□□□□□ -0.19
CXCL12-205ENST00000395794 A0A1W2PQ67 120 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 TSPAN11A1L157 253 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 FAM149AA5PLN7 773 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 SCAMP1O15126 338 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 SPINT1O43278 529 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 AKR1B10O60218 316 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 BUB1BO60566 1050 aaPredicted RBP13.86□□□□□ -0.19
CXCL12-205ENST00000395794 H2AFZP0C0S5 128 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 NME1P15531 152 aaKnown RBP13.86□□□□□ -0.19
CXCL12-205ENST00000395794 TCF4P15884 667 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 JUNDP17535 347 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 ITIH2P19823 946 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 ACP1P24666 158 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 NFKBIAP25963 317 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 HTR1BP28222 390 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 HSPA9P38646 679 aaKnown RBP13.86□□□□□ -0.19
CXCL12-205ENST00000395794 DUSP3P51452 185 aaPredicted RBP13.86□□□□□ -0.19
CXCL12-205ENST00000395794 CDH6P55285 790 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 PFN3P60673 137 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 AP1S1P61966 158 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 E2F1Q01094 437 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 LRRC14Q15048 493 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 SLC18A3Q16572 532 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 PROX2Q3B8N5 592 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 ZFYVE27Q5T4F4 411 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 ARHGAP36Q6ZRI8 547 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 H2AFVQ71UI9 128 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 MAP7D3Q8IWC1 876 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 PDCD7Q8N8D1 485 aaKnown RBP13.86□□□□□ -0.19
CXCL12-205ENST00000395794 VOPP1Q96AW1 172 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 PSKH2Q96QS6 385 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 ANP32EQ9BTT0 268 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 SLC13A1Q9BZW2 595 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 USP29Q9HBJ7 922 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 PCDH18Q9HCL0 1135 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 GPR27Q9NS67 375 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 HAUS2Q9NVX0 235 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 NCKIPSDQ9NZQ3 722 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 RCOR3Q9P2K3 495 aaPredicted RBP13.86□□□□□ -0.19
CXCL12-205ENST00000395794 SPASTQ9UBP0 616 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 ATP8A1Q9Y2Q0 1164 aa13.86□□□□□ -0.19
CXCL12-205ENST00000395794 TRABD2BA6NFA1 517 aa13.85□□□□□ -0.19
CXCL12-205ENST00000395794 SRRM3A6NNA2 597 aaPredicted RBP13.85□□□□□ -0.19
CXCL12-205ENST00000395794 TMEM110-MUSTN1A8MSY1 372 aa13.85□□□□□ -0.19
CXCL12-205ENST00000395794 RIOK3O14730 519 aaKnown RBP13.85□□□□□ -0.19
CXCL12-205ENST00000395794 C6P13671 934 aa13.85□□□□□ -0.19
CXCL12-205ENST00000395794 GJC1P36383 396 aa13.85□□□□□ -0.19
CXCL12-205ENST00000395794 RGRP47804 291 aa13.85□□□□□ -0.19
CXCL12-205ENST00000395794 LIG3P49916 1009 aa13.85□□□□□ -0.19
CXCL12-205ENST00000395794 SLC25A11Q02978 314 aaKnown RBP13.85□□□□□ -0.19
CXCL12-205ENST00000395794 SLC10A7Q0GE19 358 aa13.85□□□□□ -0.19
CXCL12-205ENST00000395794 FAXCQ5TGI0 409 aa13.85□□□□□ -0.19
CXCL12-205ENST00000395794 MARC1Q5VT66 337 aa13.85□□□□□ -0.19
CXCL12-205ENST00000395794 LRRC49Q8IUZ0 686 aa13.85□□□□□ -0.19
CXCL12-205ENST00000395794 KCTD6Q8NC69 237 aa13.85□□□□□ -0.19
CXCL12-205ENST00000395794 ZNF548Q8NEK5 533 aaPredicted RBP13.85□□□□□ -0.19
CXCL12-205ENST00000395794 ATL2Q8NHH9 583 aa13.85□□□□□ -0.19
CXCL12-205ENST00000395794 LMX1AQ8TE12 382 aa13.85□□□□□ -0.19
CXCL12-205ENST00000395794 IL12RB2Q99665 862 aa13.85□□□□□ -0.19
CXCL12-205ENST00000395794 CSNK1G3Q9Y6M4 447 aa13.85□□□□□ -0.19
CXCL12-205ENST00000395794 CHD5Q8TDI0 1954 aa13.85□□□□□ -0.19
CXCL12-205ENST00000395794 KNL1Q8NG31 2342 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms