RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 ZNF165P49910 485 aa18.21■□□□□ 0.51
CXCL12-204ENST00000395793 E2F1Q01094 437 aa18.21■□□□□ 0.51
CXCL12-204ENST00000395793 ERMARDQ5T6L9 678 aa18.21■□□□□ 0.51
CXCL12-204ENST00000395793 PPP1R2P3Q6NXS1 205 aa18.21■□□□□ 0.51
CXCL12-204ENST00000395793 PHACTR4Q8IZ21 702 aa18.21■□□□□ 0.51
CXCL12-204ENST00000395793 LMX1AQ8TE12 382 aa18.21■□□□□ 0.51
CXCL12-204ENST00000395793 FNIP1Q8TF40 1166 aa18.21■□□□□ 0.51
CXCL12-204ENST00000395793 ZNF653Q96CK0 615 aa18.21■□□□□ 0.51
CXCL12-204ENST00000395793 NCAPGQ9BPX3 1015 aa18.21■□□□□ 0.51
CXCL12-204ENST00000395793 LRRC61Q9BV99 259 aa18.21■□□□□ 0.51
CXCL12-204ENST00000395793 SUV39H2Q9H5I1 410 aa18.21■□□□□ 0.51
CXCL12-204ENST00000395793 PCDH12Q9NPG4 1184 aa18.21■□□□□ 0.51
CXCL12-204ENST00000395793 AK5Q9Y6K8 562 aa18.21■□□□□ 0.51
CXCL12-204ENST00000395793 CSNK1G3Q9Y6M4 447 aa18.21■□□□□ 0.51
CXCL12-204ENST00000395793 PTPRQQ9UMZ3 2332 aa18.21■□□□□ 0.51
CXCL12-204ENST00000395793 BRINP1O60477 761 aa18.2■□□□□ 0.5
CXCL12-204ENST00000395793 TCF4P15884 667 aa18.2■□□□□ 0.5
CXCL12-204ENST00000395793 IL1R2P27930 398 aa18.2■□□□□ 0.5
CXCL12-204ENST00000395793 KLHL30Q0D2K2 578 aa18.2■□□□□ 0.5
CXCL12-204ENST00000395793 C1orf61Q13536 156 aa18.2■□□□□ 0.5
CXCL12-204ENST00000395793 WSCD2Q2TBF2 565 aa18.2■□□□□ 0.5
CXCL12-204ENST00000395793 FILIP1LQ4L180 1135 aa18.2■□□□□ 0.5
CXCL12-204ENST00000395793 ZCCHC8Q6NZY4 707 aaKnown RBP18.2■□□□□ 0.5
CXCL12-204ENST00000395793 GUSBP11Q6P575 273 aa18.2■□□□□ 0.5
CXCL12-204ENST00000395793 CAMK1DQ8IU85 385 aa18.2■□□□□ 0.5
CXCL12-204ENST00000395793 TSEN2Q8NCE0 465 aaKnown RBP18.2■□□□□ 0.5
CXCL12-204ENST00000395793 IFI44Q8TCB0 444 aa18.2■□□□□ 0.5
CXCL12-204ENST00000395793 DUSP23Q9BVJ7 150 aa18.2■□□□□ 0.5
CXCL12-204ENST00000395793 CLPBQ9H078 707 aa18.2■□□□□ 0.5
CXCL12-204ENST00000395793 CWC15Q9P013 229 aaKnown RBP18.2■□□□□ 0.5
CXCL12-204ENST00000395793 APOBEC3BQ9UH17 382 aaKnown RBP18.2■□□□□ 0.5
CXCL12-204ENST00000395793 SHROOM3Q8TF72 1996 aa18.19■□□□□ 0.5
CXCL12-204ENST00000395793 ARHGAP42A6NI28 874 aa18.19■□□□□ 0.5
CXCL12-204ENST00000395793 EIF3CLB5ME19 914 aaKnown RBP18.19■□□□□ 0.5
CXCL12-204ENST00000395793 RIOK3O14730 519 aaKnown RBP18.19■□□□□ 0.5
CXCL12-204ENST00000395793 MUSKO15146 869 aa18.19■□□□□ 0.5
CXCL12-204ENST00000395793 CASC3O15234 703 aaKnown RBP18.19■□□□□ 0.5
CXCL12-204ENST00000395793 CELA2BP08218 269 aaPredicted RBP18.19■□□□□ 0.5
CXCL12-204ENST00000395793 C6P13671 934 aa18.19■□□□□ 0.5
CXCL12-204ENST00000395793 DESP17661 470 aa18.19■□□□□ 0.5
CXCL12-204ENST00000395793 MMP12P39900 470 aa18.19■□□□□ 0.5
CXCL12-204ENST00000395793 EIF2S3P41091 472 aaKnown RBP18.19■□□□□ 0.5
CXCL12-204ENST00000395793 THOP1P52888 689 aa18.19■□□□□ 0.5
CXCL12-204ENST00000395793 YPEL5P62699 121 aa18.19■□□□□ 0.5
CXCL12-204ENST00000395793 DPYSQ14117 519 aa18.19■□□□□ 0.5
CXCL12-204ENST00000395793 NR1I3Q14994 352 aa18.19■□□□□ 0.5
CXCL12-204ENST00000395793 CDKN3Q16667 212 aa18.19■□□□□ 0.5
CXCL12-204ENST00000395793 UGP2Q16851 508 aa18.19■□□□□ 0.5
CXCL12-204ENST00000395793 SOWAHCQ53LP3 525 aaPredicted RBP18.19■□□□□ 0.5
CXCL12-204ENST00000395793 PPP6R3Q5H9R7 873 aaPredicted RBP18.19■□□□□ 0.5
CXCL12-204ENST00000395793 HGSNATQ68CP4 663 aa18.19■□□□□ 0.5
CXCL12-204ENST00000395793 MACC1Q6ZN28 852 aa18.19■□□□□ 0.5
CXCL12-204ENST00000395793 HCAR2Q8TDS4 363 aa18.19■□□□□ 0.5
CXCL12-204ENST00000395793 BBC3Q96PG8 261 aaPredicted RBP18.19■□□□□ 0.5
CXCL12-204ENST00000395793 EIF3CQ99613 913 aaKnown RBP18.19■□□□□ 0.5
CXCL12-204ENST00000395793 MYO1AQ9UBC5 1043 aa18.19■□□□□ 0.5
CXCL12-204ENST00000395793 KIF26BQ2KJY2 2108 aa18.19■□□□□ 0.5
CXCL12-204ENST00000395793 LOC400499M0QZD8 3231 aa18.18■□□□□ 0.5
CXCL12-204ENST00000395793 DFFAO00273 331 aa18.18■□□□□ 0.5
CXCL12-204ENST00000395793 PRPSAP2O60256 369 aa18.18■□□□□ 0.5
CXCL12-204ENST00000395793 RNF8O76064 485 aa18.18■□□□□ 0.5
CXCL12-204ENST00000395793 GP1BAP07359 652 aa18.18■□□□□ 0.5
CXCL12-204ENST00000395793 TGM2P21980 687 aa18.18■□□□□ 0.5
CXCL12-204ENST00000395793 EIF4A3P38919 411 aaKnown RBP18.18■□□□□ 0.5
CXCL12-204ENST00000395793 SUOXP51687 545 aa18.18■□□□□ 0.5
CXCL12-204ENST00000395793 ELP6Q0PNE2 266 aa18.18■□□□□ 0.5
CXCL12-204ENST00000395793 RALGDSQ12967 914 aa18.18■□□□□ 0.5
CXCL12-204ENST00000395793 PRRT3Q5FWE3 981 aa18.18■□□□□ 0.5
CXCL12-204ENST00000395793 PERM1Q5SV97 790 aa18.18■□□□□ 0.5
CXCL12-204ENST00000395793 KCTD16Q68DU8 428 aa18.18■□□□□ 0.5
CXCL12-204ENST00000395793 SRLQ86TD4 932 aa18.18■□□□□ 0.5
CXCL12-204ENST00000395793 SLC35F3Q8IY50 421 aa18.18■□□□□ 0.5
CXCL12-204ENST00000395793 SNIP1Q8TAD8 396 aaKnown RBP18.18■□□□□ 0.5
CXCL12-204ENST00000395793 ISCUQ9H1K1 167 aa18.18■□□□□ 0.5
CXCL12-204ENST00000395793 USP29Q9HBJ7 922 aa18.18■□□□□ 0.5
CXCL12-204ENST00000395793 ETNK2Q9NVF9 386 aa18.18■□□□□ 0.5
CXCL12-204ENST00000395793 CPED1A4D0V7 1026 aa18.17■□□□□ 0.5
CXCL12-204ENST00000395793 TPP1O14773 563 aa18.17■□□□□ 0.5
CXCL12-204ENST00000395793 DAPK3O43293 454 aa18.17■□□□□ 0.5
CXCL12-204ENST00000395793 PALMO75781 387 aa18.17■□□□□ 0.5
CXCL12-204ENST00000395793 XPAP23025 273 aaPredicted RBP18.17■□□□□ 0.5
CXCL12-204ENST00000395793 PBX1P40424 430 aa18.17■□□□□ 0.5
CXCL12-204ENST00000395793 CSNK1DP48730 415 aa18.17■□□□□ 0.5
CXCL12-204ENST00000395793 DUSP3P51452 185 aaPredicted RBP18.17■□□□□ 0.5
CXCL12-204ENST00000395793 ADKP55263 362 aaKnown RBP18.17■□□□□ 0.5
CXCL12-204ENST00000395793 PTK2BQ14289 1009 aa18.17■□□□□ 0.5
CXCL12-204ENST00000395793 LRRC14Q15048 493 aa18.17■□□□□ 0.5
CXCL12-204ENST00000395793 SMTNL2Q2TAL5 461 aa18.17■□□□□ 0.5
CXCL12-204ENST00000395793 FIGNQ5HY92 759 aa18.17■□□□□ 0.5
CXCL12-204ENST00000395793 TXNRD3NBQ6F5E7 133 aa18.17■□□□□ 0.5
CXCL12-204ENST00000395793 CRTC1Q6UUV9 634 aa18.17■□□□□ 0.5
CXCL12-204ENST00000395793 EFL1Q7Z2Z2 1120 aaKnown RBP18.17■□□□□ 0.5
CXCL12-204ENST00000395793 BTN2A2Q8WVV5 523 aa18.17■□□□□ 0.5
CXCL12-204ENST00000395793 ECHDC3Q96DC8 303 aa18.17■□□□□ 0.5
CXCL12-204ENST00000395793 ZNF641Q96N77 438 aaPredicted RBP18.17■□□□□ 0.5
CXCL12-204ENST00000395793 TUBGCP5Q96RT8 1024 aa18.17■□□□□ 0.5
CXCL12-204ENST00000395793 BOCQ9BWV1 1114 aa18.17■□□□□ 0.5
CXCL12-204ENST00000395793 C1QTNF7Q9BXJ2 289 aa18.17■□□□□ 0.5
CXCL12-204ENST00000395793 EDEM3Q9BZQ6 932 aa18.17■□□□□ 0.5
CXCL12-204ENST00000395793 SP110Q9HB58 689 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms