RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 TLR10Q9BXR5 811 aa16.71■□□□□ 0.27
CXCL1-201ENST00000395761 BRD8Q9H0E9 1235 aa16.71■□□□□ 0.27
CXCL1-201ENST00000395761 C10orf88Q9H8K7 445 aa16.71■□□□□ 0.27
CXCL1-201ENST00000395761 FSCN3Q9NQT6 498 aa16.71■□□□□ 0.27
CXCL1-201ENST00000395761 SEPT10Q9P0V9 454 aa16.71■□□□□ 0.27
CXCL1-201ENST00000395761 ZFR2Q9UPR6 939 aaKnown RBP16.71■□□□□ 0.27
CXCL1-201ENST00000395761 ATP8A1Q9Y2Q0 1164 aa16.71■□□□□ 0.27
CXCL1-201ENST00000395761 TTLL3Q9Y4R7 772 aa16.71■□□□□ 0.27
CXCL1-201ENST00000395761 PTPRZ1P23471 2315 aaPredicted RBP16.71■□□□□ 0.27
CXCL1-201ENST00000395761 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.7■□□□□ 0.26
CXCL1-201ENST00000395761 A0A1W2PPC4 97 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 APOC4-APOC2K7ER74 178 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 KIF2AO00139 706 aaPredicted RBP16.7■□□□□ 0.26
CXCL1-201ENST00000395761 WNT9AO14904 365 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 AREL1O15033 823 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 KHNYNO15037 678 aaKnown RBP16.7■□□□□ 0.26
CXCL1-201ENST00000395761 BCAT2O15382 392 aaPredicted RBP16.7■□□□□ 0.26
CXCL1-201ENST00000395761 LATO43561 262 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 AP1G1O43747 822 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 APOC2P02655 101 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 PRKCGP05129 697 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 CFIP05156 583 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 HOXD12P35452 270 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 DPP6P42658 865 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 MAPK8P45983 427 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 SEMG2Q02383 582 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 TRAF2Q12933 501 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 RPS6KA1Q15418 735 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 UGP2Q16851 508 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 DUOXA1Q1HG43 343 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 SEL1L3Q68CR1 1132 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 NEK5Q6P3R8 708 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 HORMAD1Q86X24 394 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 ARRDC2Q8TBH0 407 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 ACTL9Q8TC94 416 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 HCAR2Q8TDS4 363 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 RAB7BQ96AH8 199 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 ECHDC3Q96DC8 303 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 WDR24Q96S15 920 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 POLR1EQ9GZS1 481 aaKnown RBP16.7■□□□□ 0.26
CXCL1-201ENST00000395761 RXFP3Q9NSD7 469 aa16.7■□□□□ 0.26
CXCL1-201ENST00000395761 A0A1B0GTW7 788 aa16.69■□□□□ 0.26
CXCL1-201ENST00000395761 TCRBV7S2A1N4TA0A589 114 aa16.69■□□□□ 0.26
CXCL1-201ENST00000395761 HTRA2O43464 458 aaPredicted RBP16.69■□□□□ 0.26
CXCL1-201ENST00000395761 NEBLO76041 1014 aa16.69■□□□□ 0.26
CXCL1-201ENST00000395761 TJP3O95049 919 aa16.69■□□□□ 0.26
CXCL1-201ENST00000395761 GNSP15586 552 aa16.69■□□□□ 0.26
CXCL1-201ENST00000395761 PTPN3P26045 913 aa16.69■□□□□ 0.26
CXCL1-201ENST00000395761 OTUD4Q01804 1114 aaKnown RBP16.69■□□□□ 0.26
CXCL1-201ENST00000395761 NOMO1Q15155 1222 aa16.69■□□□□ 0.26
CXCL1-201ENST00000395761 ZNF284Q2VY69 593 aa16.69■□□□□ 0.26
CXCL1-201ENST00000395761 RALGPS1Q5JS13 557 aa16.69■□□□□ 0.26
CXCL1-201ENST00000395761 CFAP58Q5T655 872 aa16.69■□□□□ 0.26
CXCL1-201ENST00000395761 ALG1LQ6GMV1 187 aa16.69■□□□□ 0.26
CXCL1-201ENST00000395761 SLC23A3Q6PIS1 610 aa16.69■□□□□ 0.26
CXCL1-201ENST00000395761 BRAT1Q6PJG6 821 aa16.69■□□□□ 0.26
CXCL1-201ENST00000395761 PRPF39Q86UA1 669 aaKnown RBP16.69■□□□□ 0.26
CXCL1-201ENST00000395761 GPR161Q8N6U8 529 aaKnown RBP16.69■□□□□ 0.26
CXCL1-201ENST00000395761 CEP76Q8TAP6 659 aa16.69■□□□□ 0.26
CXCL1-201ENST00000395761 FEM1CQ96JP0 617 aa16.69■□□□□ 0.26
CXCL1-201ENST00000395761 SLC6A18Q96N87 628 aa16.69■□□□□ 0.26
CXCL1-201ENST00000395761 AGAP3Q96P47 875 aa16.69■□□□□ 0.26
CXCL1-201ENST00000395761 CAPN10Q9HC96 672 aa16.69■□□□□ 0.26
CXCL1-201ENST00000395761 TM9SF3Q9HD45 589 aa16.69■□□□□ 0.26
CXCL1-201ENST00000395761 PCDH12Q9NPG4 1184 aa16.69■□□□□ 0.26
CXCL1-201ENST00000395761 SUSD2Q9UGT4 822 aa16.69■□□□□ 0.26
CXCL1-201ENST00000395761 AMACRQ9UHK6 382 aa16.69■□□□□ 0.26
CXCL1-201ENST00000395761 SLC6A14Q9UN76 642 aa16.69■□□□□ 0.26
CXCL1-201ENST00000395761 RAI2Q9Y5P3 530 aa16.69■□□□□ 0.26
CXCL1-201ENST00000395761 IGLON5A6NGN9 336 aa16.68■□□□□ 0.26
CXCL1-201ENST00000395761 UPK3BL1B0FP48 263 aa16.68■□□□□ 0.26
CXCL1-201ENST00000395761 UPK3BL2E5RIL1 263 aa16.68■□□□□ 0.26
CXCL1-201ENST00000395761 H7C0C1 242 aa16.68■□□□□ 0.26
CXCL1-201ENST00000395761 NEMP1O14524 444 aa16.68■□□□□ 0.26
CXCL1-201ENST00000395761 SLC31A1O15431 190 aa16.68■□□□□ 0.26
CXCL1-201ENST00000395761 TSPAN6O43657 245 aa16.68■□□□□ 0.26
CXCL1-201ENST00000395761 GDF9O60383 454 aa16.68■□□□□ 0.26
CXCL1-201ENST00000395761 SERPINF2P08697 491 aa16.68■□□□□ 0.26
CXCL1-201ENST00000395761 PRLRP16471 622 aa16.68■□□□□ 0.26
CXCL1-201ENST00000395761 XPAP23025 273 aaPredicted RBP16.68■□□□□ 0.26
CXCL1-201ENST00000395761 ATP5OP48047 213 aa16.68■□□□□ 0.26
CXCL1-201ENST00000395761 CSNK1EP49674 416 aaKnown RBP16.68■□□□□ 0.26
CXCL1-201ENST00000395761 WASHC5Q12768 1159 aa16.68■□□□□ 0.26
CXCL1-201ENST00000395761 FGL2Q14314 439 aa16.68■□□□□ 0.26
CXCL1-201ENST00000395761 TMEM259Q4ZIN3 620 aa16.68■□□□□ 0.26
CXCL1-201ENST00000395761 TEX44Q53QW1 395 aa16.68■□□□□ 0.26
CXCL1-201ENST00000395761 PAPD7Q5XG87 772 aaKnown RBP16.68■□□□□ 0.26
CXCL1-201ENST00000395761 LAYNQ6UX15 382 aa16.68■□□□□ 0.26
CXCL1-201ENST00000395761 C12orf50Q8NA57 414 aaPredicted RBP16.68■□□□□ 0.26
CXCL1-201ENST00000395761 PDCD6IPQ8WUM4 868 aaKnown RBP16.68■□□□□ 0.26
CXCL1-201ENST00000395761 QKIQ96PU8 341 aaKnown RBP eCLIP16.68■□□□□ 0.26
CXCL1-201ENST00000395761 CA5BQ9Y2D0 317 aa16.68■□□□□ 0.26
CXCL1-201ENST00000395761 RALGAPA1Q6GYQ0 2036 aa16.68■□□□□ 0.26
CXCL1-201ENST00000395761 LNP1A1A4G5 178 aa16.67■□□□□ 0.26
CXCL1-201ENST00000395761 HACD1B0YJ81 288 aa16.67■□□□□ 0.26
CXCL1-201ENST00000395761 RIOK3O14730 519 aaKnown RBP16.67■□□□□ 0.26
CXCL1-201ENST00000395761 MMP20O60882 483 aa16.67■□□□□ 0.26
CXCL1-201ENST00000395761 PGLSO95336 258 aa16.67■□□□□ 0.26
CXCL1-201ENST00000395761 MMP2P08253 660 aa16.67■□□□□ 0.26
CXCL1-201ENST00000395761 PDHA1P08559 390 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms