RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 GRM7Q14831 915 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 KCNT1Q5JUK3 1230 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 PLA2G4FQ68DD2 849 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 SULT1C3Q6IMI6 304 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 DPY19L3Q6ZPD9 716 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 TFAP2DQ7Z6R9 452 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 PHC2Q8IXK0 858 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 SLFN12Q8IYM2 578 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 ZBTB38Q8NAP3 1195 aaPredicted RBP12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 SLC22A8Q8TCC7 542 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 TAS1R2Q8TE23 839 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 CNDP2Q96KP4 475 aaKnown RBP12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 ENTPD7Q9NQZ7 604 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 FBXO8Q9NRD0 319 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 EVA1BQ9NVM1 165 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 MRPL39Q9NYK5 338 aaKnown RBP12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 SRP68Q9UHB9 627 aaKnown RBP12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 VPS28Q9UK41 221 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 F8VP50 259 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 TPP1O14773 563 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 ITGAVP06756 1048 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 BMP2P12643 396 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 CYP2A7P20853 494 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 GSTM2P28161 218 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 MAPK12P53778 367 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 GP2P55259 537 aaKnown RBP12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 POLR2GP62487 172 aaKnown RBP eCLIP12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 EPS8Q12929 822 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 ATF7IP2Q5U623 682 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 SYCE2Q6PIF2 218 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 TXNDC11Q6PKC3 985 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 SPPL2CQ8IUH8 684 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 SAMD14Q8IZD0 417 aaPredicted RBP12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 LINC00518Q8N0U6 118 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 LHFPL5Q8TAF8 219 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 PPP1R13LQ8WUF5 828 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 DDX1Q92499 740 aaKnown RBP12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 RPL3LQ92901 407 aaKnown RBP12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 C8orf37Q96NL8 207 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 GAD1Q99259 594 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 PI4K2AQ9BTU6 479 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 GHITMQ9H3K2 345 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 DHX33Q9H6R0 707 aaKnown RBP12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 PLAC1Q9HBJ0 212 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 EXD2Q9NVH0 621 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 REV1Q9UBZ9 1251 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 AGTPBP1Q9UPW5 1226 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 PCDHB4Q9Y5E5 795 aa12.62□□□□□ -0.39
SLC28A1-203ENST00000394573 HEATR9A2RTY3 570 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 TSC22D2O75157 780 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 SLITRK5O94991 958 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 HTR1AP08908 422 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 CCNCP24863 283 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 ZNF33BQ06732 778 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 CMTR2Q8IYT2 770 aaKnown RBP12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 OR4M1Q8NGD0 313 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 OR10Z1Q8NGY1 313 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 TTC9Q92623 222 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 ATXN7L3BQ96GX2 97 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 NEDD4LQ96PU5 975 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 IL1RL2Q9HB29 575 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 C14orf119Q9NWQ9 140 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 FBXL12Q9NXK8 326 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 RAD54BQ9Y620 910 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 PTPRFP10586 1907 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 TCRBV3S1A0A5B6 114 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 FAM86B1E9PN63 330 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 GAS2O43903 313 aaKnown RBP12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 ZNF780AO75290 641 aaPredicted RBP12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 PDGFAP04085 211 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 CYP2A6P11509 494 aaPredicted RBP12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 OSBPP22059 807 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 OXTRP30559 389 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 NSFP46459 744 aaKnown RBP12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 SLAMF1Q13291 335 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 TOP3AQ13472 1001 aaPredicted RBP12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 BMT2Q1RMZ1 405 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 HYIQ5T013 277 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 FAM219BQ5XKK7 198 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 RSBN1LQ6PCB5 846 aaPredicted RBP12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 NOXA1Q86UR1 476 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 DHFR2Q86XF0 187 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 ANKRD53Q8N9V6 530 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 SHCBP1Q8NEM2 672 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 FAR1Q8WVX9 515 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 SEPT1Q8WYJ6 367 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 BTBD2Q9BX70 525 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 TRIM8Q9BZR9 551 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 SMPD3Q9NY59 655 aaPredicted RBP12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 GLTPQ9NZD2 209 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 CYB5R1Q9UHQ9 305 aa12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 DRG1Q9Y295 367 aaKnown RBP12.61□□□□□ -0.39
SLC28A1-203ENST00000394573 PLCH1Q4KWH8 1693 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 hCG_1818297A0A087WSY0 165 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 PNMA6FA0A0J9YX94 578 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 SAGE2PA6NJ88 616 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 NUPL2O15504 423 aaKnown RBP12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 CST8O60676 142 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 ITGALP20701 1170 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 IL1R2P27930 398 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms