RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 C12orf65Q9H3J6 166 aaKnown RBP3.6□□□□□ -1.83
XRN1-202ENST00000392981 RNPEPL1Q9HAU8 725 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 C20orf141Q9NUB4 165 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 ARL15Q9NXU5 204 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 CHMP5Q9NZZ3 219 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 TMPRSS11EQ9UL52 423 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 GOLGA6L10A6NI86 522 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 GOLGA6L19H0YKK7 550 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 WRBO00258 174 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 CA12O43570 354 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 SSX5O60225 188 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 POMCP01189 267 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 OR52Z1P0C646 297 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 RPS2P15880 293 aaKnown RBP3.6□□□□□ -1.83
XRN1-202ENST00000392981 SREBF1P36956 1147 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 ARSEP51690 589 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 SLC25A3Q00325 362 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 LCP2Q13094 533 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 IQCCQ4KMZ1 466 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 FAM182BQ5T319 152 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 STXBP5Q5T5C0 1151 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 TRMT10BQ6PF06 316 aaKnown RBP3.6□□□□□ -1.83
XRN1-202ENST00000392981 TRABD2AQ86V40 505 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 RASGEF1CQ8N431 466 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 PI4KAP1Q8N8J0 262 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 ANKRD53Q8N9V6 530 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 PDPRQ8NCN5 879 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 OR14K1Q8NGZ2 314 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 NAP1L3Q99457 506 aaPredicted RBP3.6□□□□□ -1.83
XRN1-202ENST00000392981 PARK7Q99497 189 aaKnown RBP3.6□□□□□ -1.83
XRN1-202ENST00000392981 ST6GALNAC4Q9H4F1 302 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 FAM83DQ9H4H8 585 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 CRLF2Q9HC73 371 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 ETNK2Q9NVF9 386 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 HCN3Q9P1Z3 774 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 HCSTQ9UBK5 93 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 RCE1Q9Y256 329 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 KIF13AQ9H1H9 1805 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 CDH23Q9H251 3354 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 LAMC3Q9Y6N6 1575 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 A0A0A6YYC8 382 aaPredicted RBP3.6□□□□□ -1.83
XRN1-202ENST00000392981 C1orf226A1L170 272 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 HTR3EA5X5Y0 456 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 I3L1I5 382 aaPredicted RBP3.6□□□□□ -1.83
XRN1-202ENST00000392981 PRRG1O14668 218 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 YEATS4O95619 227 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 CAPNS1P04632 268 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 FAM58BPP0C7Q3 252 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 GYPEP15421 78 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 SYKP43405 635 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 SLC6A9P48067 706 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 ETV1P50549 477 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 FOLH1Q04609 750 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 ZNF766Q5HY98 468 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 SHEQ5VZ18 495 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 BEND4Q6ZU67 534 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.6□□□□□ -1.83
XRN1-202ENST00000392981 TMEM173Q86WV6 379 aaPredicted RBP3.6□□□□□ -1.83
XRN1-202ENST00000392981 PROSER1Q86XN7 944 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 XYLT1Q86Y38 959 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 CAGE1Q8TC20 777 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 DDI1Q8WTU0 396 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 OSCP1Q8WVF1 389 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 INPP5DQ92835 1189 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 FOXRED1Q96CU9 486 aaPredicted RBP3.6□□□□□ -1.83
XRN1-202ENST00000392981 MARK4Q96L34 752 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 JPH2Q9BR39 696 aaPredicted RBP3.6□□□□□ -1.83
XRN1-202ENST00000392981 H2AFJQ9BTM1 129 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 MRPL18Q9H0U6 180 aaKnown RBP3.6□□□□□ -1.83
XRN1-202ENST00000392981 HACL1Q9UJ83 578 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 MAU2Q9Y6X3 613 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 A0A087WWL8 130 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 ASAP2O43150 1006 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 TGFB1I1O43294 461 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 MED7O43513 233 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 USP12O75317 370 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 PAHP00439 452 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 PROS1P07225 676 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 UGT1A6P19224 532 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 MAP2K3P46734 347 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 BPIFB4P59827 614 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 OTUD4Q01804 1114 aaKnown RBP3.6□□□□□ -1.83
XRN1-202ENST00000392981 DLG2Q15700 870 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 GRIK4Q16099 956 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 C15orf59Q2T9L4 293 aaPredicted RBP3.6□□□□□ -1.83
XRN1-202ENST00000392981 KCNIP4Q6PIL6 250 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 CCBE1Q6UXH8 406 aaPredicted RBP3.6□□□□□ -1.83
XRN1-202ENST00000392981 B3GNT6Q6ZMB0 384 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 EXOC6Q8TAG9 804 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 ZNF483Q8TF39 744 aaPredicted RBP3.6□□□□□ -1.83
XRN1-202ENST00000392981 HDHD5Q9BXW7 423 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 TPSD1Q9BZJ3 242 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 LRRCC1Q9C099 1032 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 ECT2Q9H8V3 914 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 TBC1D7Q9P0N9 293 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 CNOT8Q9UFF9 292 aaKnown RBP3.6□□□□□ -1.83
XRN1-202ENST00000392981 REV3LO60673 3130 aa3.6□□□□□ -1.83
XRN1-202ENST00000392981 SAMD9Q5K651 1589 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 A0A075B6Q4 140 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 SLC38A8A6NNN8 435 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms